RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 SMIM29Q86T20 159 aa6.24□□□□□ -1.41
PDGFRB-205ENST00000519575 ANAPC13Q9BS18 74 aa6.24□□□□□ -1.41
PDGFRB-205ENST00000519575 PSORS1C2Q9UIG4 136 aa6.24□□□□□ -1.41
PDGFRB-205ENST00000519575 HAMPP81172 84 aa6.23□□□□□ -1.41
PDGFRB-205ENST00000519575 LINC00483Q53H64 154 aa6.23□□□□□ -1.41
PDGFRB-205ENST00000519575 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
PDGFRB-205ENST00000519575 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
PDGFRB-205ENST00000519575 IGKV3D-7A0A0C4DH55 119 aa6.22□□□□□ -1.41
PDGFRB-205ENST00000519575 FAM236AA0A1B0GUQ0 79 aa6.22□□□□□ -1.41
PDGFRB-205ENST00000519575 FAM236BA0A1B0GV22 79 aa6.22□□□□□ -1.41
PDGFRB-205ENST00000519575 HIST1H4AP62805 103 aaKnown RBP6.22□□□□□ -1.41
PDGFRB-205ENST00000519575 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
PDGFRB-205ENST00000519575 KRTAP10-2P60368 255 aa6.21□□□□□ -1.42
PDGFRB-205ENST00000519575 A0A1W2PNM2 257 aa6.2□□□□□ -1.42
PDGFRB-205ENST00000519575 BPY2O14599 106 aa6.2□□□□□ -1.42
PDGFRB-205ENST00000519575 IGFL1Q6UW32 110 aa6.2□□□□□ -1.42
PDGFRB-205ENST00000519575 SMIM20Q8N5G0 67 aa6.2□□□□□ -1.42
PDGFRB-205ENST00000519575 CIRBP-AS1Q8TBR5 109 aa6.19□□□□□ -1.42
PDGFRB-205ENST00000519575 SCXQ7RTU7 201 aa6.18□□□□□ -1.42
PDGFRB-205ENST00000519575 SS18L2Q9UHA2 77 aa6.18□□□□□ -1.42
PDGFRB-205ENST00000519575 C9orf153Q5TBE3 101 aa6.17□□□□□ -1.42
PDGFRB-205ENST00000519575 DNAH17Q9UFH2 4485 aa6.17□□□□□ -1.42
PDGFRB-205ENST00000519575 KMT2AQ03164 3969 aa6.16□□□□□ -1.42
PDGFRB-205ENST00000519575 HECTD4Q9Y4D8 3996 aa6.15□□□□□ -1.42
PDGFRB-205ENST00000519575 J3KT08 172 aa6.15□□□□□ -1.42
PDGFRB-205ENST00000519575 KRTAP10-1P60331 282 aa6.15□□□□□ -1.42
PDGFRB-205ENST00000519575 DNAH2Q9P225 4427 aa6.15□□□□□ -1.43
PDGFRB-205ENST00000519575 FAM229BQ4G0N7 80 aa6.14□□□□□ -1.43
PDGFRB-205ENST00000519575 A0A087WSZ3 146 aa6.12□□□□□ -1.43
PDGFRB-205ENST00000519575 IGLV9-49A0A0B4J1Y8 123 aa6.12□□□□□ -1.43
PDGFRB-205ENST00000519575 UQCRQO14949 82 aa6.12□□□□□ -1.43
PDGFRB-205ENST00000519575 CD164Q04900 197 aa6.12□□□□□ -1.43
PDGFRB-205ENST00000519575 FAM30AQ9NZY2 134 aa6.12□□□□□ -1.43
PDGFRB-205ENST00000519575 A0A087WVE0 104 aa6.11□□□□□ -1.43
PDGFRB-205ENST00000519575 SSBP3-AS1Q7Z2R9 100 aa6.11□□□□□ -1.43
PDGFRB-205ENST00000519575 SERP2Q8N6R1 65 aa6.11□□□□□ -1.43
PDGFRB-205ENST00000519575 FRAS1Q86XX4 4008 aa6.09□□□□□ -1.43
PDGFRB-205ENST00000519575 COX7CP15954 63 aa6.09□□□□□ -1.43
PDGFRB-205ENST00000519575 MOBPQ13875 183 aa6.09□□□□□ -1.43
PDGFRB-205ENST00000519575 NDUFB1O75438 58 aa6.08□□□□□ -1.44
PDGFRB-205ENST00000519575 IGKV4-1P06312 121 aa6.08□□□□□ -1.44
PDGFRB-205ENST00000519575 TRAV7A0A075B6U4 112 aa6.07□□□□□ -1.44
PDGFRB-205ENST00000519575 A0A1B0GVY2 172 aa6.07□□□□□ -1.44
PDGFRB-205ENST00000519575 SPINK6Q6UWN8 80 aa6.06□□□□□ -1.44
PDGFRB-205ENST00000519575 A8MWP4 228 aa6.04□□□□□ -1.44
PDGFRB-205ENST00000519575 CDK2AP2O75956 126 aa6.04□□□□□ -1.44
PDGFRB-205ENST00000519575 LINC00472Q9H8W2 130 aa6.04□□□□□ -1.44
PDGFRB-205ENST00000519575 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
PDGFRB-205ENST00000519575 DSCR10P59022 87 aa6.03□□□□□ -1.44
PDGFRB-205ENST00000519575 ASB16-AS1Q495Z4 193 aa6.02□□□□□ -1.45
PDGFRB-205ENST00000519575 LIMD2Q9BT23 127 aa6.02□□□□□ -1.45
PDGFRB-205ENST00000519575 A0A0G2JQZ4 141 aa6.01□□□□□ -1.45
PDGFRB-205ENST00000519575 K7EQZ3 153 aa6.01□□□□□ -1.45
PDGFRB-205ENST00000519575 Q5XG85 94 aa6.01□□□□□ -1.45
PDGFRB-205ENST00000519575 PRR15Q8IV56 129 aa6.01□□□□□ -1.45
PDGFRB-205ENST00000519575 Q8N9L7 120 aa6.01□□□□□ -1.45
PDGFRB-205ENST00000519575 DNAH8Q96JB1 4490 aa6□□□□□ -1.45
PDGFRB-205ENST00000519575 HYDINQ4G0P3 5121 aa6□□□□□ -1.45
PDGFRB-205ENST00000519575 CCDC179H3BU77 68 aa6□□□□□ -1.45
PDGFRB-205ENST00000519575 DNAH11Q96DT5 4516 aa6□□□□□ -1.45
PDGFRB-205ENST00000519575 FAT2Q9NYQ8 4349 aa6□□□□□ -1.45
PDGFRB-205ENST00000519575 PKD1P98161 4303 aa5.99□□□□□ -1.45
PDGFRB-205ENST00000519575 SRRM2Q9UQ35 2752 aaKnown RBP5.99□□□□□ -1.45
PDGFRB-205ENST00000519575 DNAH5Q8TE73 4624 aa5.99□□□□□ -1.45
PDGFRB-205ENST00000519575 C4orf48Q5BLP8 95 aa5.99□□□□□ -1.45
PDGFRB-205ENST00000519575 NDUFC1O43677 76 aa5.98□□□□□ -1.45
PDGFRB-205ENST00000519575 PLA2G1BP04054 148 aaKnown RBP5.98□□□□□ -1.45
PDGFRB-205ENST00000519575 SPAG11AQ6PDA7 123 aa5.97□□□□□ -1.45
PDGFRB-205ENST00000519575 HRCT1Q6UXD1 115 aa5.97□□□□□ -1.45
PDGFRB-205ENST00000519575 ANAPC11Q9NYG5 84 aa5.97□□□□□ -1.45
PDGFRB-205ENST00000519575 KRTAP1-4P0C5Y4 121 aa5.96□□□□□ -1.46
PDGFRB-205ENST00000519575 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.46
PDGFRB-205ENST00000519575 CASC2Q6XLA1 102 aa5.96□□□□□ -1.46
PDGFRB-205ENST00000519575 OCR1Q9BZK8 76 aa5.96□□□□□ -1.46
PDGFRB-205ENST00000519575 SACSQ9NZJ4 4579 aa5.96□□□□□ -1.46
PDGFRB-205ENST00000519575 FAM229AH3BQW9 127 aa5.95□□□□□ -1.46
PDGFRB-205ENST00000519575 SPINK1P00995 79 aa5.95□□□□□ -1.46
PDGFRB-205ENST00000519575 KLKP1Q107X0 134 aa5.95□□□□□ -1.46
PDGFRB-205ENST00000519575 TYMSOSQ8TAI1 123 aa5.95□□□□□ -1.46
PDGFRB-205ENST00000519575 Q96NJ1 140 aa5.95□□□□□ -1.46
PDGFRB-205ENST00000519575 A0A1B0GVX0 72 aa5.94□□□□□ -1.46
PDGFRB-205ENST00000519575 TMEM258P61165 79 aa5.94□□□□□ -1.46
PDGFRB-205ENST00000519575 DEFB116Q30KQ4 102 aa5.94□□□□□ -1.46
PDGFRB-205ENST00000519575 C5orf47Q569G3 176 aa5.94□□□□□ -1.46
PDGFRB-205ENST00000519575 A0A087X002 238 aa5.93□□□□□ -1.46
PDGFRB-205ENST00000519575 C8orf87E5RJ46 101 aa5.93□□□□□ -1.46
PDGFRB-205ENST00000519575 KRTAP13-2Q52LG2 175 aa5.93□□□□□ -1.46
PDGFRB-205ENST00000519575 C20orf197Q8N268 126 aa5.93□□□□□ -1.46
PDGFRB-205ENST00000519575 TP53AIP1Q9HCN2 124 aa5.93□□□□□ -1.46
PDGFRB-205ENST00000519575 hDV103S1A0JD37 113 aa5.92□□□□□ -1.46
PDGFRB-205ENST00000519575 H3BPC8 53 aa5.92□□□□□ -1.46
PDGFRB-205ENST00000519575 MP68P56378 58 aa5.92□□□□□ -1.46
PDGFRB-205ENST00000519575 TMEM254Q8TBM7 123 aa5.92□□□□□ -1.46
PDGFRB-205ENST00000519575 KRTAP29-1A8MX34 341 aaPredicted RBP5.91□□□□□ -1.46
PDGFRB-205ENST00000519575 WFDC13Q8IUB5 93 aa5.91□□□□□ -1.46
PDGFRB-205ENST00000519575 RYR2Q92736 4967 aa5.9□□□□□ -1.46
PDGFRB-205ENST00000519575 MMP24-AS1A0A0U1RRL7 71 aa5.9□□□□□ -1.46
PDGFRB-205ENST00000519575 ATP5EP56381 51 aaPredicted RBP5.9□□□□□ -1.46
PDGFRB-205ENST00000519575 C8orf17Q9NRJ1 99 aa5.9□□□□□ -1.46
PDGFRB-205ENST00000519575 LINC00304Q8N9R0 145 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms