RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 Q6ZVQ6 151 aa6.83□□□□□ -1.32
SPIDR-204ENST00000517824 KRTAP7-1Q8IUC3 87 aa6.83□□□□□ -1.32
SPIDR-204ENST00000517824 LINC00476Q8WZB0 136 aa6.83□□□□□ -1.32
SPIDR-204ENST00000517824 IGLV5-48A0A075B6I7 105 aa6.82□□□□□ -1.32
SPIDR-204ENST00000517824 A0A087WTM6 91 aa6.82□□□□□ -1.32
SPIDR-204ENST00000517824 LY6G6CO95867 125 aa6.82□□□□□ -1.32
SPIDR-204ENST00000517824 PHF5AQ7RTV0 110 aaKnown RBP6.82□□□□□ -1.32
SPIDR-204ENST00000517824 Q8N377 158 aa6.82□□□□□ -1.32
SPIDR-204ENST00000517824 RTL8CO15255 209 aa6.81□□□□□ -1.32
SPIDR-204ENST00000517824 CXCL6P80162 114 aa6.81□□□□□ -1.32
SPIDR-204ENST00000517824 C1orf137Q5JT78 98 aa6.81□□□□□ -1.32
SPIDR-204ENST00000517824 ST20-AS1Q8NBB2 130 aa6.81□□□□□ -1.32
SPIDR-204ENST00000517824 PCLOQ9Y6V0 5065 aa6.8□□□□□ -1.32
SPIDR-204ENST00000517824 NREPQ16612 68 aa6.8□□□□□ -1.32
SPIDR-204ENST00000517824 IGLV5-52A0A0A0MRZ9 124 aa6.79□□□□□ -1.32
SPIDR-204ENST00000517824 A0A1B0GW54 56 aa6.79□□□□□ -1.32
SPIDR-204ENST00000517824 LINC01547P58512 204 aaPredicted RBP6.79□□□□□ -1.32
SPIDR-204ENST00000517824 PKD1P98161 4303 aa6.78□□□□□ -1.32
SPIDR-204ENST00000517824 H0Y9J4 135 aa6.78□□□□□ -1.32
SPIDR-204ENST00000517824 ERC2-IT1O76042 136 aa6.78□□□□□ -1.32
SPIDR-204ENST00000517824 Q6ZR54 194 aa6.78□□□□□ -1.32
SPIDR-204ENST00000517824 C3orf22Q8N5N4 141 aa6.78□□□□□ -1.32
SPIDR-204ENST00000517824 A0A087WVE0 104 aa6.77□□□□□ -1.33
SPIDR-204ENST00000517824 BCE1O60756 84 aa6.77□□□□□ -1.33
SPIDR-204ENST00000517824 C9orf153Q5TBE3 101 aa6.77□□□□□ -1.33
SPIDR-204ENST00000517824 SPACA4Q8TDM5 124 aa6.77□□□□□ -1.33
SPIDR-204ENST00000517824 EPM2AB3EWF7 344 aa6.76□□□□□ -1.33
SPIDR-204ENST00000517824 Q8NBF4 154 aa6.76□□□□□ -1.33
SPIDR-204ENST00000517824 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
SPIDR-204ENST00000517824 BPY2O14599 106 aa6.75□□□□□ -1.33
SPIDR-204ENST00000517824 UQCRQO14949 82 aa6.75□□□□□ -1.33
SPIDR-204ENST00000517824 SCXQ7RTU7 201 aa6.75□□□□□ -1.33
SPIDR-204ENST00000517824 ZNF706Q9Y5V0 76 aaPredicted RBP6.74□□□□□ -1.33
SPIDR-204ENST00000517824 COX7CP15954 63 aa6.73□□□□□ -1.33
SPIDR-204ENST00000517824 SMIM20Q8N5G0 67 aa6.73□□□□□ -1.33
SPIDR-204ENST00000517824 ABCA13Q86UQ4 5058 aa6.72□□□□□ -1.33
SPIDR-204ENST00000517824 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
SPIDR-204ENST00000517824 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.72□□□□□ -1.33
SPIDR-204ENST00000517824 A0A1W2PNM2 257 aa6.7□□□□□ -1.34
SPIDR-204ENST00000517824 HSPG2P98160 4391 aa6.7□□□□□ -1.34
SPIDR-204ENST00000517824 LRP1BQ9NZR2 4599 aa6.69□□□□□ -1.34
SPIDR-204ENST00000517824 PANO1I0J062 215 aa6.69□□□□□ -1.34
SPIDR-204ENST00000517824 IGFL1Q6UW32 110 aa6.69□□□□□ -1.34
SPIDR-204ENST00000517824 IGLV8-61A0A075B6I0 122 aa6.68□□□□□ -1.34
SPIDR-204ENST00000517824 SPRR1BP22528 89 aa6.68□□□□□ -1.34
SPIDR-204ENST00000517824 SMIM29Q86T20 159 aa6.68□□□□□ -1.34
SPIDR-204ENST00000517824 SPRR4Q96PI1 79 aa6.68□□□□□ -1.34
SPIDR-204ENST00000517824 KRTAP11-1Q8IUC1 163 aa6.67□□□□□ -1.34
SPIDR-204ENST00000517824 PLAC8Q9NZF1 115 aa6.67□□□□□ -1.34
SPIDR-204ENST00000517824 TRAV7A0A075B6U4 112 aa6.66□□□□□ -1.34
SPIDR-204ENST00000517824 CRYGAP11844 174 aa6.66□□□□□ -1.34
SPIDR-204ENST00000517824 DNAH5Q8TE73 4624 aa6.65□□□□□ -1.34
SPIDR-204ENST00000517824 IGKV4-1P06312 121 aa6.64□□□□□ -1.35
SPIDR-204ENST00000517824 PSORS1C2Q9UIG4 136 aa6.64□□□□□ -1.35
SPIDR-204ENST00000517824 APOBP04114 4563 aaKnown RBP6.63□□□□□ -1.35
SPIDR-204ENST00000517824 A0A087WSZ3 146 aa6.63□□□□□ -1.35
SPIDR-204ENST00000517824 IGLV9-49A0A0B4J1Y8 123 aa6.63□□□□□ -1.35
SPIDR-204ENST00000517824 KRTAP13-1Q8IUC0 172 aa6.63□□□□□ -1.35
SPIDR-204ENST00000517824 Q8N9L7 120 aa6.63□□□□□ -1.35
SPIDR-204ENST00000517824 SS18L2Q9UHA2 77 aa6.63□□□□□ -1.35
SPIDR-204ENST00000517824 A0A1B0GVY2 172 aa6.6□□□□□ -1.35
SPIDR-204ENST00000517824 ZNF861PO60384 105 aa6.6□□□□□ -1.35
SPIDR-204ENST00000517824 RPL37AP61513 92 aaKnown RBP6.6□□□□□ -1.35
SPIDR-204ENST00000517824 A0A0G2JQZ4 141 aa6.59□□□□□ -1.35
SPIDR-204ENST00000517824 LOC100996750A0A140TA64 210 aa6.59□□□□□ -1.35
SPIDR-204ENST00000517824 KRTAP4-6Q9BYQ5 205 aa6.59□□□□□ -1.35
SPIDR-204ENST00000517824 LINC00483Q53H64 154 aa6.58□□□□□ -1.36
SPIDR-204ENST00000517824 C20orf197Q8N268 126 aa6.58□□□□□ -1.36
SPIDR-204ENST00000517824 HERC1Q15751 4861 aa6.57□□□□□ -1.36
SPIDR-204ENST00000517824 IGLV7-43P04211 117 aa6.57□□□□□ -1.36
SPIDR-204ENST00000517824 TMEM258P61165 79 aa6.57□□□□□ -1.36
SPIDR-204ENST00000517824 MOBPQ13875 183 aa6.57□□□□□ -1.36
SPIDR-204ENST00000517824 LINC00336Q6ZUF6 198 aa6.57□□□□□ -1.36
SPIDR-204ENST00000517824 HCG22E2RYF7 251 aa6.56□□□□□ -1.36
SPIDR-204ENST00000517824 J3KT08 172 aa6.56□□□□□ -1.36
SPIDR-204ENST00000517824 K7EQZ3 153 aa6.55□□□□□ -1.36
SPIDR-204ENST00000517824 CDK2AP2O75956 126 aa6.55□□□□□ -1.36
SPIDR-204ENST00000517824 KRTAP10-2P60368 255 aa6.55□□□□□ -1.36
SPIDR-204ENST00000517824 NDUFB1O75438 58 aa6.54□□□□□ -1.36
SPIDR-204ENST00000517824 DSCR10P59022 87 aa6.54□□□□□ -1.36
SPIDR-204ENST00000517824 FAT1Q14517 4588 aa6.54□□□□□ -1.36
SPIDR-204ENST00000517824 DEFB116Q30KQ4 102 aa6.53□□□□□ -1.36
SPIDR-204ENST00000517824 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
SPIDR-204ENST00000517824 NDUFC1O43677 76 aa6.52□□□□□ -1.37
SPIDR-204ENST00000517824 HRCT1Q6UXD1 115 aa6.52□□□□□ -1.37
SPIDR-204ENST00000517824 CIRBP-AS1Q8TBR5 109 aa6.52□□□□□ -1.37
SPIDR-204ENST00000517824 A8MWP4 228 aa6.51□□□□□ -1.37
SPIDR-204ENST00000517824 WFDC13Q8IUB5 93 aa6.51□□□□□ -1.37
SPIDR-204ENST00000517824 FAM30AQ9NZY2 134 aa6.51□□□□□ -1.37
SPIDR-204ENST00000517824 KRTAP10-1P60331 282 aa6.49□□□□□ -1.37
SPIDR-204ENST00000517824 KLKP1Q107X0 134 aa6.49□□□□□ -1.37
SPIDR-204ENST00000517824 CASC2Q6XLA1 102 aa6.49□□□□□ -1.37
SPIDR-204ENST00000517824 TMEM254Q8TBM7 123 aa6.49□□□□□ -1.37
SPIDR-204ENST00000517824 SNURFQ9Y675 71 aa6.49□□□□□ -1.37
SPIDR-204ENST00000517824 FAM236DA0A1B0GTK5 79 aa6.48□□□□□ -1.37
SPIDR-204ENST00000517824 FAM236CP0DP71 79 aa6.48□□□□□ -1.37
SPIDR-204ENST00000517824 OCR1Q9BZK8 76 aa6.48□□□□□ -1.37
SPIDR-204ENST00000517824 ATP5EP56381 51 aaPredicted RBP6.47□□□□□ -1.37
SPIDR-204ENST00000517824 Q6ZSA8 131 aa6.47□□□□□ -1.37
SPIDR-204ENST00000517824 PRR15Q8IV56 129 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms