RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 HIST1H2BHQ93079 126 aa3.52□□□□□ -1.85
HMGN1P17-201ENST00000513734 HIST1H2BNQ99877 126 aa3.52□□□□□ -1.85
HMGN1P17-201ENST00000513734 HIST1H2BMQ99879 126 aa3.52□□□□□ -1.85
HMGN1P17-201ENST00000513734 A0A0U1RQV1 116 aa3.51□□□□□ -1.85
HMGN1P17-201ENST00000513734 LINC00587B1AMM8 73 aa3.51□□□□□ -1.85
HMGN1P17-201ENST00000513734 SYS1-DBNDD2H3BUS1 97 aa3.51□□□□□ -1.85
HMGN1P17-201ENST00000513734 NMUP48645 174 aa3.51□□□□□ -1.85
HMGN1P17-201ENST00000513734 S100A7L2Q5SY68 101 aa3.51□□□□□ -1.85
HMGN1P17-201ENST00000513734 FP248Q71RG6 208 aaPredicted RBP3.51□□□□□ -1.85
HMGN1P17-201ENST00000513734 ZNF73O43830 326 aaPredicted RBP3.5□□□□□ -1.85
HMGN1P17-201ENST00000513734 NDUFC2O95298 119 aa3.5□□□□□ -1.85
HMGN1P17-201ENST00000513734 SPINK1P00995 79 aa3.5□□□□□ -1.85
HMGN1P17-201ENST00000513734 CTAG1AP78358 180 aa3.5□□□□□ -1.85
HMGN1P17-201ENST00000513734 C9orf153Q5TBE3 101 aa3.5□□□□□ -1.85
HMGN1P17-201ENST00000513734 LINC01545Q5VT33 79 aa3.5□□□□□ -1.85
HMGN1P17-201ENST00000513734 LINC00308Q8TCZ7 52 aa3.5□□□□□ -1.85
HMGN1P17-201ENST00000513734 MIEN1Q9BRT3 115 aa3.5□□□□□ -1.85
HMGN1P17-201ENST00000513734 ASB16-AS1Q495Z4 193 aa3.49□□□□□ -1.85
HMGN1P17-201ENST00000513734 A0A0G2JQZ4 141 aa3.48□□□□□ -1.85
HMGN1P17-201ENST00000513734 ZNF815PA8K554 130 aa3.48□□□□□ -1.85
HMGN1P17-201ENST00000513734 C3orf79P0CE67 100 aa3.48□□□□□ -1.85
HMGN1P17-201ENST00000513734 HRCT1Q6UXD1 115 aa3.48□□□□□ -1.85
HMGN1P17-201ENST00000513734 S100A12P80511 92 aa3.47□□□□□ -1.85
HMGN1P17-201ENST00000513734 SSBP3-AS1Q7Z2R9 100 aa3.47□□□□□ -1.85
HMGN1P17-201ENST00000513734 ATOH7Q8N100 152 aa3.47□□□□□ -1.85
HMGN1P17-201ENST00000513734 OR13C6PQ8NH95 151 aa3.47□□□□□ -1.85
HMGN1P17-201ENST00000513734 SPANXCQ9NY87 97 aa3.47□□□□□ -1.85
HMGN1P17-201ENST00000513734 SLC25A20O43772 301 aa3.46□□□□□ -1.86
HMGN1P17-201ENST00000513734 TIMM17BO60830 172 aa3.46□□□□□ -1.86
HMGN1P17-201ENST00000513734 KRTDAPP60985 99 aa3.46□□□□□ -1.86
HMGN1P17-201ENST00000513734 RPS29P62273 56 aaKnown RBP3.46□□□□□ -1.86
HMGN1P17-201ENST00000513734 JOSD1Q15040 202 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P17-201ENST00000513734 C6orf99Q4VX62 202 aa3.46□□□□□ -1.86
HMGN1P17-201ENST00000513734 SPRR1BP22528 89 aa3.45□□□□□ -1.86
HMGN1P17-201ENST00000513734 ELOF1P60002 83 aaKnown RBP3.45□□□□□ -1.86
HMGN1P17-201ENST00000513734 KRTAP19-2Q3LHN2 52 aa3.45□□□□□ -1.86
HMGN1P17-201ENST00000513734 PCP2Q8IVA1 136 aa3.45□□□□□ -1.86
HMGN1P17-201ENST00000513734 DEFB105AQ8NG35 78 aa3.45□□□□□ -1.86
HMGN1P17-201ENST00000513734 SPANXDQ9BXN6 97 aa3.45□□□□□ -1.86
HMGN1P17-201ENST00000513734 C9orf92A6NGG3 77 aa3.44□□□□□ -1.86
HMGN1P17-201ENST00000513734 H7C2G1 150 aa3.44□□□□□ -1.86
HMGN1P17-201ENST00000513734 COX7BP24311 80 aa3.44□□□□□ -1.86
HMGN1P17-201ENST00000513734 COA6Q5JTJ3 125 aaKnown RBP3.44□□□□□ -1.86
HMGN1P17-201ENST00000513734 PCOTHQ58A44 107 aa3.43□□□□□ -1.86
HMGN1P17-201ENST00000513734 SCGB1D4Q6XE38 83 aa3.42□□□□□ -1.86
HMGN1P17-201ENST00000513734 MUSTN1Q8IVN3 82 aa3.42□□□□□ -1.86
HMGN1P17-201ENST00000513734 HINT1P49773 126 aaPredicted RBP3.41□□□□□ -1.86
HMGN1P17-201ENST00000513734 TAL2Q16559 108 aa3.41□□□□□ -1.86
HMGN1P17-201ENST00000513734 SMIM11BQ8TCY0 68 aa3.41□□□□□ -1.86
HMGN1P17-201ENST00000513734 LAMTOR3Q9UHA4 124 aa3.41□□□□□ -1.86
HMGN1P17-201ENST00000513734 IGLV5-48A0A075B6I7 105 aa3.4□□□□□ -1.87
HMGN1P17-201ENST00000513734 A6NDN8 102 aa3.4□□□□□ -1.87
HMGN1P17-201ENST00000513734 MT1HP80294 61 aa3.4□□□□□ -1.87
HMGN1P17-201ENST00000513734 C1orf195Q5TG92 126 aa3.4□□□□□ -1.87
HMGN1P17-201ENST00000513734 TEX49A0A1B0GTD5 131 aa3.39□□□□□ -1.87
HMGN1P17-201ENST00000513734 HIST3H2BBQ8N257 126 aa3.39□□□□□ -1.87
HMGN1P17-201ENST00000513734 LIMD2Q9BT23 127 aa3.39□□□□□ -1.87
HMGN1P17-201ENST00000513734 CBY1Q9Y3M2 126 aa3.39□□□□□ -1.87
HMGN1P17-201ENST00000513734 TRBV7-6A0A0J9YX20 115 aa3.38□□□□□ -1.87
HMGN1P17-201ENST00000513734 C20orf202A1L168 122 aa3.38□□□□□ -1.87
HMGN1P17-201ENST00000513734 IFITM1P13164 125 aa3.38□□□□□ -1.87
HMGN1P17-201ENST00000513734 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
HMGN1P17-201ENST00000513734 SLC25A34Q6PIV7 304 aa3.38□□□□□ -1.87
HMGN1P17-201ENST00000513734 C12orf57Q99622 126 aa3.38□□□□□ -1.87
HMGN1P17-201ENST00000513734 HIST1H2BLQ99880 126 aa3.38□□□□□ -1.87
HMGN1P17-201ENST00000513734 PRO1933Q9H354 126 aa3.38□□□□□ -1.87
HMGN1P17-201ENST00000513734 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
HMGN1P17-201ENST00000513734 CD164Q04900 197 aa3.37□□□□□ -1.87
HMGN1P17-201ENST00000513734 AKR1D1P51857 326 aa3.36□□□□□ -1.87
HMGN1P17-201ENST00000513734 TRAV13-2A0A0B4J235 113 aa3.35□□□□□ -1.87
HMGN1P17-201ENST00000513734 Q5XG85 94 aa3.35□□□□□ -1.87
HMGN1P17-201ENST00000513734 LINC00575Q6W349 94 aa3.35□□□□□ -1.87
HMGN1P17-201ENST00000513734 Q6ZQY7 126 aa3.35□□□□□ -1.87
HMGN1P17-201ENST00000513734 Q6ZVH6 145 aa3.35□□□□□ -1.87
HMGN1P17-201ENST00000513734 FSIP2Q5CZC0 6907 aa3.34□□□□□ -1.87
HMGN1P17-201ENST00000513734 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
HMGN1P17-201ENST00000513734 RPL37P61927 97 aaKnown RBP3.34□□□□□ -1.87
HMGN1P17-201ENST00000513734 IGFL1Q6UW32 110 aa3.34□□□□□ -1.87
HMGN1P17-201ENST00000513734 COPS9Q8WXC6 57 aa3.34□□□□□ -1.87
HMGN1P17-201ENST00000513734 hADV29S1A0JD25 119 aa3.33□□□□□ -1.88
HMGN1P17-201ENST00000513734 H3BUT2 72 aa3.33□□□□□ -1.88
HMGN1P17-201ENST00000513734 CAMK2N1Q7Z7J9 78 aa3.33□□□□□ -1.88
HMGN1P17-201ENST00000513734 TRBV7-7A0A0K0K1E9 115 aa3.32□□□□□ -1.88
HMGN1P17-201ENST00000513734 S100A2P29034 98 aa3.32□□□□□ -1.88
HMGN1P17-201ENST00000513734 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
HMGN1P17-201ENST00000513734 NHP2Q9NX24 153 aaKnown RBP3.32□□□□□ -1.88
HMGN1P17-201ENST00000513734 HSBP1L1C9JCN9 74 aa3.31□□□□□ -1.88
HMGN1P17-201ENST00000513734 F8WEM9 126 aa3.31□□□□□ -1.88
HMGN1P17-201ENST00000513734 CLEC2BQ92478 149 aa3.31□□□□□ -1.88
HMGN1P17-201ENST00000513734 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
HMGN1P17-201ENST00000513734 TCL1BO95988 128 aa3.3□□□□□ -1.88
HMGN1P17-201ENST00000513734 COX8AP10176 69 aa3.3□□□□□ -1.88
HMGN1P17-201ENST00000513734 OCIAD2Q56VL3 154 aa3.3□□□□□ -1.88
HMGN1P17-201ENST00000513734 C14orf144Q96I85 54 aa3.3□□□□□ -1.88
HMGN1P17-201ENST00000513734 OBSCN-AS1Q96MR7 158 aa3.3□□□□□ -1.88
HMGN1P17-201ENST00000513734 VAMP3Q15836 100 aa3.29□□□□□ -1.88
HMGN1P17-201ENST00000513734 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.29□□□□□ -1.88
HMGN1P17-201ENST00000513734 C2orf91Q6ZV80 131 aa3.29□□□□□ -1.88
HMGN1P17-201ENST00000513734 Q8N9L7 120 aa3.29□□□□□ -1.88
HMGN1P17-201ENST00000513734 Q6JHZ5 121 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms