RNA–Protein interactions for RNA: ENST00000513448.5

PROM1-215, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-215ENST00000513448 IGFL1Q6UW32 110 aa5.82□□□□□ -1.48
PROM1-215ENST00000513448 Q8N9L7 120 aa5.82□□□□□ -1.48
PROM1-215ENST00000513448 PLECQ15149 4684 aaKnown RBP5.82□□□□□ -1.48
PROM1-215ENST00000513448 EPM2AB3EWF7 344 aa5.82□□□□□ -1.48
PROM1-215ENST00000513448 PHF5AQ7RTV0 110 aaKnown RBP5.82□□□□□ -1.48
PROM1-215ENST00000513448 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
PROM1-215ENST00000513448 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
PROM1-215ENST00000513448 UBE2AP49459 152 aa5.81□□□□□ -1.48
PROM1-215ENST00000513448 SVIPQ8NHG7 77 aa5.81□□□□□ -1.48
PROM1-215ENST00000513448 CHTF8P0CG12 524 aa5.81□□□□□ -1.48
PROM1-215ENST00000513448 ATP5EP56381 51 aaPredicted RBP5.81□□□□□ -1.48
PROM1-215ENST00000513448 DSCR10P59022 87 aa5.81□□□□□ -1.48
PROM1-215ENST00000513448 TMEM254Q8TBM7 123 aa5.81□□□□□ -1.48
PROM1-215ENST00000513448 CSMD3Q7Z407 3707 aa5.79□□□□□ -1.48
PROM1-215ENST00000513448 VPS13DQ5THJ4 4388 aa5.78□□□□□ -1.48
PROM1-215ENST00000513448 SNURFQ9Y675 71 aa5.78□□□□□ -1.48
PROM1-215ENST00000513448 DNAH7Q8WXX0 4024 aa5.78□□□□□ -1.48
PROM1-215ENST00000513448 KRTAP13-1Q8IUC0 172 aa5.77□□□□□ -1.49
PROM1-215ENST00000513448 KRTAP11-1Q8IUC1 163 aa5.77□□□□□ -1.49
PROM1-215ENST00000513448 SPACA4Q8TDM5 124 aa5.77□□□□□ -1.49
PROM1-215ENST00000513448 LCE6AA0A183 80 aa5.77□□□□□ -1.49
PROM1-215ENST00000513448 SERP1Q9Y6X1 66 aa5.77□□□□□ -1.49
PROM1-215ENST00000513448 A0A087WSZ3 146 aa5.76□□□□□ -1.49
PROM1-215ENST00000513448 A0A087WTM6 91 aa5.76□□□□□ -1.49
PROM1-215ENST00000513448 A0A0U1RQV1 116 aa5.76□□□□□ -1.49
PROM1-215ENST00000513448 K7EQZ3 153 aa5.76□□□□□ -1.49
PROM1-215ENST00000513448 HCG22E2RYF7 251 aa5.75□□□□□ -1.49
PROM1-215ENST00000513448 RPL37AP61513 92 aaKnown RBP5.75□□□□□ -1.49
PROM1-215ENST00000513448 C5orf47Q569G3 176 aa5.74□□□□□ -1.49
PROM1-215ENST00000513448 Q6ZR54 194 aa5.74□□□□□ -1.49
PROM1-215ENST00000513448 PANO1I0J062 215 aa5.73□□□□□ -1.49
PROM1-215ENST00000513448 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
PROM1-215ENST00000513448 ZNF706Q9Y5V0 76 aaPredicted RBP5.72□□□□□ -1.49
PROM1-215ENST00000513448 LINC00483Q53H64 154 aa5.72□□□□□ -1.49
PROM1-215ENST00000513448 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.72□□□□□ -1.49
PROM1-215ENST00000513448 A0A0G2JQZ4 141 aa5.71□□□□□ -1.5
PROM1-215ENST00000513448 OXTP01178 125 aa5.71□□□□□ -1.5
PROM1-215ENST00000513448 LINC00472Q9H8W2 130 aa5.71□□□□□ -1.5
PROM1-215ENST00000513448 FAM30AQ9NZY2 134 aa5.71□□□□□ -1.5
PROM1-215ENST00000513448 STARD9Q9P2P6 4700 aa5.71□□□□□ -1.5
PROM1-215ENST00000513448 TENM2Q9NT68 2774 aa5.71□□□□□ -1.5
PROM1-215ENST00000513448 RTL8CO15255 209 aa5.7□□□□□ -1.5
PROM1-215ENST00000513448 C4orf48Q5BLP8 95 aa5.7□□□□□ -1.5
PROM1-215ENST00000513448 PLAC8Q9NZF1 115 aa5.7□□□□□ -1.5
PROM1-215ENST00000513448 A8MWP4 228 aa5.7□□□□□ -1.5
PROM1-215ENST00000513448 PRR15Q8IV56 129 aa5.7□□□□□ -1.5
PROM1-215ENST00000513448 IGLV5-52A0A0A0MRZ9 124 aa5.69□□□□□ -1.5
PROM1-215ENST00000513448 KRTAP29-1A8MX34 341 aaPredicted RBP5.68□□□□□ -1.5
PROM1-215ENST00000513448 ZCCHC13Q8WW36 166 aaKnown RBP5.68□□□□□ -1.5
PROM1-215ENST00000513448 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
PROM1-215ENST00000513448 DEFB116Q30KQ4 102 aa5.67□□□□□ -1.5
PROM1-215ENST00000513448 C1orf134Q5TEV5 83 aa5.67□□□□□ -1.5
PROM1-215ENST00000513448 KRTAP4-6Q9BYQ5 205 aa5.67□□□□□ -1.5
PROM1-215ENST00000513448 DNAH17Q9UFH2 4485 aa5.67□□□□□ -1.5
PROM1-215ENST00000513448 HECTD4Q9Y4D8 3996 aa5.67□□□□□ -1.5
PROM1-215ENST00000513448 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
PROM1-215ENST00000513448 ZNF861PO60384 105 aa5.67□□□□□ -1.5
PROM1-215ENST00000513448 NDUFB1O75438 58 aa5.67□□□□□ -1.5
PROM1-215ENST00000513448 H3BPC8 53 aa5.66□□□□□ -1.5
PROM1-215ENST00000513448 MP68P56378 58 aa5.66□□□□□ -1.5
PROM1-215ENST00000513448 PSORS1C2Q9UIG4 136 aa5.66□□□□□ -1.5
PROM1-215ENST00000513448 DNAH2Q9P225 4427 aa5.65□□□□□ -1.5
PROM1-215ENST00000513448 CASC2Q6XLA1 102 aa5.65□□□□□ -1.5
PROM1-215ENST00000513448 LCE2CQ5TA81 110 aa5.65□□□□□ -1.51
PROM1-215ENST00000513448 Q5XG85 94 aa5.65□□□□□ -1.51
PROM1-215ENST00000513448 WFDC13Q8IUB5 93 aa5.64□□□□□ -1.51
PROM1-215ENST00000513448 WWC2-AS2Q96NR7 200 aa5.64□□□□□ -1.51
PROM1-215ENST00000513448 IGLV9-49A0A0B4J1Y8 123 aa5.63□□□□□ -1.51
PROM1-215ENST00000513448 KMT2AQ03164 3969 aa5.63□□□□□ -1.51
PROM1-215ENST00000513448 DNAH6Q9C0G6 4158 aa5.62□□□□□ -1.51
PROM1-215ENST00000513448 SRRM2Q9UQ35 2752 aaKnown RBP5.61□□□□□ -1.51
PROM1-215ENST00000513448 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
PROM1-215ENST00000513448 Q96NJ1 140 aa5.61□□□□□ -1.51
PROM1-215ENST00000513448 MOBPQ13875 183 aa5.6□□□□□ -1.51
PROM1-215ENST00000513448 DNAH8Q96JB1 4490 aa5.6□□□□□ -1.51
PROM1-215ENST00000513448 MMP24-AS1A0A0U1RRL7 71 aa5.6□□□□□ -1.51
PROM1-215ENST00000513448 ASB16-AS1Q495Z4 193 aa5.6□□□□□ -1.51
PROM1-215ENST00000513448 CYP4F30PQ9H0H9 118 aa5.6□□□□□ -1.51
PROM1-215ENST00000513448 TP53AIP1Q9HCN2 124 aa5.6□□□□□ -1.51
PROM1-215ENST00000513448 TRAV22A0A0B4J277 110 aa5.59□□□□□ -1.51
PROM1-215ENST00000513448 IGLV7-43P04211 117 aa5.59□□□□□ -1.51
PROM1-215ENST00000513448 C4orf26Q17RF5 130 aa5.59□□□□□ -1.51
PROM1-215ENST00000513448 LY6G6CO95867 125 aa5.58□□□□□ -1.52
PROM1-215ENST00000513448 H0Y9P7 68 aa5.58□□□□□ -1.52
PROM1-215ENST00000513448 CD164Q04900 197 aa5.58□□□□□ -1.52
PROM1-215ENST00000513448 FP248Q71RG6 208 aaPredicted RBP5.58□□□□□ -1.52
PROM1-215ENST00000513448 SPANXA2-OT1Q8N9U9 137 aa5.58□□□□□ -1.52
PROM1-215ENST00000513448 MEGF8Q7Z7M0 2845 aa5.58□□□□□ -1.52
PROM1-215ENST00000513448 LINC00208Q96KT6 92 aa5.57□□□□□ -1.52
PROM1-215ENST00000513448 A0A1B0GVX0 72 aa5.56□□□□□ -1.52
PROM1-215ENST00000513448 CDK2AP2O75956 126 aa5.56□□□□□ -1.52
PROM1-215ENST00000513448 SSBP3-AS1Q7Z2R9 100 aa5.56□□□□□ -1.52
PROM1-215ENST00000513448 C8orf17Q9NRJ1 99 aa5.55□□□□□ -1.52
PROM1-215ENST00000513448 DNHD1Q96M86 4753 aa5.55□□□□□ -1.52
PROM1-215ENST00000513448 HRCT1Q6UXD1 115 aa5.55□□□□□ -1.52
PROM1-215ENST00000513448 C1orf64Q8NEQ6 169 aa5.54□□□□□ -1.52
PROM1-215ENST00000513448 FRAS1Q86XX4 4008 aa5.54□□□□□ -1.52
PROM1-215ENST00000513448 KRTAP21-3Q3LHN1 58 aa5.53□□□□□ -1.52
PROM1-215ENST00000513448 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
PROM1-215ENST00000513448 Q6ZSA8 131 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms