RNA–Protein interactions for RNA: ENST00000509982.5

CDK11A-223, Transcript of cyclin dependent kinase 11A, human

TSL 5

Gene CDK11A, Length 2,306 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-223	ENST00000509982	SERP1	Q9Y6X1	66 aa		11.63	□□□□□ -0.55
CDK11A-223	ENST00000509982	SRRM2	Q9UQ35	2752 aa	Known RBP	11.62	□□□□□ -0.55
CDK11A-223	ENST00000509982	PLEC	Q15149	4684 aa	Known RBP	11.61	□□□□□ -0.55
CDK11A-223	ENST00000509982	HRCT1	Q6UXD1	115 aa		11.6	□□□□□ -0.55
CDK11A-223	ENST00000509982	C14orf177	Q52M58	125 aa		11.6	□□□□□ -0.55
CDK11A-223	ENST00000509982		K7EQZ3	153 aa		11.59	□□□□□ -0.55
CDK11A-223	ENST00000509982	LRCOL1	A6NCL2	159 aa		11.58	□□□□□ -0.56
CDK11A-223	ENST00000509982	MDFI	Q99750	246 aa		11.58	□□□□□ -0.56
CDK11A-223	ENST00000509982	B9D2	Q9BPU9	175 aa		11.58	□□□□□ -0.56
CDK11A-223	ENST00000509982	NDUFC1	O43677	76 aa		11.57	□□□□□ -0.56
CDK11A-223	ENST00000509982	FAM30A	Q9NZY2	134 aa		11.57	□□□□□ -0.56
CDK11A-223	ENST00000509982	IGLV8-61	A0A075B6I0	122 aa		11.56	□□□□□ -0.56
CDK11A-223	ENST00000509982		A0A0U1RQV1	116 aa		11.56	□□□□□ -0.56
CDK11A-223	ENST00000509982	C9orf163	Q8N9P6	203 aa		11.56	□□□□□ -0.56
CDK11A-223	ENST00000509982	DEFB116	Q30KQ4	102 aa		11.54	□□□□□ -0.56
CDK11A-223	ENST00000509982	NBDY	A0A0U1RRE5	68 aa		11.54	□□□□□ -0.56
CDK11A-223	ENST00000509982	UBE2A	P49459	152 aa		11.54	□□□□□ -0.56
CDK11A-223	ENST00000509982	PANO1	I0J062	215 aa		11.53	□□□□□ -0.56
CDK11A-223	ENST00000509982		A0A087WSZ3	146 aa		11.53	□□□□□ -0.56
CDK11A-223	ENST00000509982		Q6ZRN7	208 aa	Predicted RBP	11.52	□□□□□ -0.57
CDK11A-223	ENST00000509982		H0Y9J4	135 aa		11.5	□□□□□ -0.57
CDK11A-223	ENST00000509982	FP248	Q71RG6	208 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK11A-223	ENST00000509982	SPRR1B	P22528	89 aa		11.47	□□□□□ -0.57
CDK11A-223	ENST00000509982	ATP5E	P56381	51 aa	Predicted RBP	11.47	□□□□□ -0.57
CDK11A-223	ENST00000509982	STARD9	Q9P2P6	4700 aa		11.46	□□□□□ -0.57
CDK11A-223	ENST00000509982	LCE6A	A0A183	80 aa		11.46	□□□□□ -0.57
CDK11A-223	ENST00000509982	NUPR2	A6NF83	97 aa		11.46	□□□□□ -0.57
CDK11A-223	ENST00000509982	HCG22	E2RYF7	251 aa		11.46	□□□□□ -0.57
CDK11A-223	ENST00000509982	SMIM26	A0A096LP01	95 aa		11.45	□□□□□ -0.58
CDK11A-223	ENST00000509982	RPL37A	P61513	92 aa	Known RBP	11.44	□□□□□ -0.58
CDK11A-223	ENST00000509982	LINC00474	Q9P2X8	69 aa		11.43	□□□□□ -0.58
CDK11A-223	ENST00000509982	KRTAP13-1	Q8IUC0	172 aa		11.42	□□□□□ -0.58
CDK11A-223	ENST00000509982	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.42	□□□□□ -0.58
CDK11A-223	ENST00000509982	WFDC13	Q8IUB5	93 aa		11.4	□□□□□ -0.58
CDK11A-223	ENST00000509982	PKIG	Q9Y2B9	76 aa		11.4	□□□□□ -0.58
CDK11A-223	ENST00000509982	VPS13D	Q5THJ4	4388 aa		11.39	□□□□□ -0.59
CDK11A-223	ENST00000509982	PRKDC	P78527	4128 aa	Known RBP	11.39	□□□□□ -0.59
CDK11A-223	ENST00000509982	SPACA4	Q8TDM5	124 aa		11.38	□□□□□ -0.59
CDK11A-223	ENST00000509982	FAM229B	Q4G0N7	80 aa		11.36	□□□□□ -0.59
CDK11A-223	ENST00000509982	ZCCHC13	Q8WW36	166 aa	Known RBP	11.36	□□□□□ -0.59
CDK11A-223	ENST00000509982	LINC00336	Q6ZUF6	198 aa		11.36	□□□□□ -0.59
CDK11A-223	ENST00000509982	LINC00472	Q9H8W2	130 aa		11.35	□□□□□ -0.59
CDK11A-223	ENST00000509982		A0A087WTM6	91 aa		11.34	□□□□□ -0.59
CDK11A-223	ENST00000509982	HECTD4	Q9Y4D8	3996 aa		11.33	□□□□□ -0.6
CDK11A-223	ENST00000509982	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.32	□□□□□ -0.6
CDK11A-223	ENST00000509982	PRR15	Q8IV56	129 aa		11.31	□□□□□ -0.6
CDK11A-223	ENST00000509982	KMT2A	Q03164	3969 aa		11.31	□□□□□ -0.6
CDK11A-223	ENST00000509982		A8MWP4	228 aa		11.29	□□□□□ -0.6
CDK11A-223	ENST00000509982	IGLV9-49	A0A0B4J1Y8	123 aa		11.28	□□□□□ -0.6
CDK11A-223	ENST00000509982	PRO0628	Q9UI54	55 aa		11.28	□□□□□ -0.6
CDK11A-223	ENST00000509982	MEGF8	Q7Z7M0	2845 aa		11.28	□□□□□ -0.6
CDK11A-223	ENST00000509982	CASC2	Q6XLA1	102 aa		11.27	□□□□□ -0.61
CDK11A-223	ENST00000509982	DNAH2	Q9P225	4427 aa		11.26	□□□□□ -0.61
CDK11A-223	ENST00000509982	RTL8C	O15255	209 aa		11.26	□□□□□ -0.61
CDK11A-223	ENST00000509982	FRAS1	Q86XX4	4008 aa		11.24	□□□□□ -0.61
CDK11A-223	ENST00000509982	MPLKIP	Q8TAP9	179 aa		11.23	□□□□□ -0.61
CDK11A-223	ENST00000509982	PSORS1C2	Q9UIG4	136 aa		11.23	□□□□□ -0.61
CDK11A-223	ENST00000509982	LINC00483	Q53H64	154 aa		11.23	□□□□□ -0.61
CDK11A-223	ENST00000509982		Q6ZR54	194 aa		11.23	□□□□□ -0.61
CDK11A-223	ENST00000509982	FBN3	Q75N90	2809 aa		11.22	□□□□□ -0.61
CDK11A-223	ENST00000509982	IGLV5-52	A0A0A0MRZ9	124 aa		11.2	□□□□□ -0.62
CDK11A-223	ENST00000509982		Q96NJ1	140 aa		11.2	□□□□□ -0.62
CDK11A-223	ENST00000509982	DNAH17	Q9UFH2	4485 aa		11.2	□□□□□ -0.62
CDK11A-223	ENST00000509982	MP68	P56378	58 aa		11.2	□□□□□ -0.62
CDK11A-223	ENST00000509982	hDV103S1	A0JD37	113 aa		11.19	□□□□□ -0.62
CDK11A-223	ENST00000509982	LINC00208	Q96KT6	92 aa		11.19	□□□□□ -0.62
CDK11A-223	ENST00000509982	MMP24-AS1	A0A0U1RRL7	71 aa		11.19	□□□□□ -0.62
CDK11A-223	ENST00000509982	PRR4	Q16378	134 aa		11.19	□□□□□ -0.62
CDK11A-223	ENST00000509982	DNAH8	Q96JB1	4490 aa		11.18	□□□□□ -0.62
CDK11A-223	ENST00000509982	ANAPC11	Q9NYG5	84 aa		11.18	□□□□□ -0.62
CDK11A-223	ENST00000509982	C1orf64	Q8NEQ6	169 aa		11.18	□□□□□ -0.62
CDK11A-223	ENST00000509982	WWC2-AS2	Q96NR7	200 aa		11.18	□□□□□ -0.62
CDK11A-223	ENST00000509982	PLAC8	Q9NZF1	115 aa		11.18	□□□□□ -0.62
CDK11A-223	ENST00000509982	TG	P01266	2768 aa		11.17	□□□□□ -0.62
CDK11A-223	ENST00000509982	TRAV22	A0A0B4J277	110 aa		11.17	□□□□□ -0.62
CDK11A-223	ENST00000509982		H0Y9P7	68 aa		11.17	□□□□□ -0.62
CDK11A-223	ENST00000509982	MOBP	Q13875	183 aa		11.17	□□□□□ -0.62
CDK11A-223	ENST00000509982	ZNF706	Q9Y5V0	76 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK11A-223	ENST00000509982	ZNF861P	O60384	105 aa		11.13	□□□□□ -0.63
CDK11A-223	ENST00000509982	NDUFB1	O75438	58 aa		11.13	□□□□□ -0.63
CDK11A-223	ENST00000509982	DNHD1	Q96M86	4753 aa		11.12	□□□□□ -0.63
CDK11A-223	ENST00000509982	CYP4F30P	Q9H0H9	118 aa		11.12	□□□□□ -0.63
CDK11A-223	ENST00000509982	BRK1	Q8WUW1	75 aa		11.1	□□□□□ -0.63
CDK11A-223	ENST00000509982	C1orf134	Q5TEV5	83 aa		11.09	□□□□□ -0.63
CDK11A-223	ENST00000509982		H3BPC8	53 aa		11.08	□□□□□ -0.64
CDK11A-223	ENST00000509982	ASB16-AS1	Q495Z4	193 aa		11.07	□□□□□ -0.64
CDK11A-223	ENST00000509982	C8orf17	Q9NRJ1	99 aa		11.05	□□□□□ -0.64
CDK11A-223	ENST00000509982	DNAH6	Q9C0G6	4158 aa		11.03	□□□□□ -0.64
CDK11A-223	ENST00000509982	IGHV6-1	A0A0B4J1U7	121 aa		11.03	□□□□□ -0.64
CDK11A-223	ENST00000509982		Q1T7F1	81 aa		11.03	□□□□□ -0.64
CDK11A-223	ENST00000509982	LY6G6C	O95867	125 aa		11.03	□□□□□ -0.64
CDK11A-223	ENST00000509982		A0A1B0GVX0	72 aa		11.01	□□□□□ -0.65
CDK11A-223	ENST00000509982	IGLV7-43	P04211	117 aa		11.01	□□□□□ -0.65
CDK11A-223	ENST00000509982	SPANXA2-OT1	Q8N9U9	137 aa		11	□□□□□ -0.65
CDK11A-223	ENST00000509982		A0A087X002	238 aa		10.98	□□□□□ -0.65
CDK11A-223	ENST00000509982	NOTCH2NL	Q7Z3S9	236 aa		10.98	□□□□□ -0.65
CDK11A-223	ENST00000509982	ALMS1	Q8TCU4	4167 aa		10.98	□□□□□ -0.65
CDK11A-223	ENST00000509982	DNAH11	Q96DT5	4516 aa		10.97	□□□□□ -0.65
CDK11A-223	ENST00000509982	DNAH5	Q8TE73	4624 aa		10.97	□□□□□ -0.65
CDK11A-223	ENST00000509982	KRTAP10-2	P60368	255 aa		10.96	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms