RNA–Protein interactions for RNA: ENST00000508618.5

GYPB-209, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 2

Gene GYPB, Length 388 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-209ENST00000508618 CFAP43Q8NDM7 1665 aa-0.65□□□□□ -2.51
GYPB-209ENST00000508618 MYH4Q9Y623 1939 aa-0.66□□□□□ -2.51
GYPB-209ENST00000508618 ATP7BP35670 1465 aa-0.66□□□□□ -2.51
GYPB-209ENST00000508618 DDX60LQ5H9U9 1706 aaKnown RBP-0.66□□□□□ -2.51
GYPB-209ENST00000508618 UNC13AQ9UPW8 1703 aa-0.66□□□□□ -2.51
GYPB-209ENST00000508618 DEFB131BA0A096LNP1 70 aa-0.66□□□□□ -2.52
GYPB-209ENST00000508618 LINC01546A6NGU7 62 aa-0.66□□□□□ -2.52
GYPB-209ENST00000508618 CPSF4LA6NMK7 179 aaKnown RBP-0.66□□□□□ -2.52
GYPB-209ENST00000508618 H0YGG7 62 aa-0.66□□□□□ -2.52
GYPB-209ENST00000508618 CD52P31358 61 aa-0.66□□□□□ -2.52
GYPB-209ENST00000508618 UBE2D2P62837 147 aa-0.66□□□□□ -2.52
GYPB-209ENST00000508618 LINC01556Q5JQF7 62 aa-0.66□□□□□ -2.52
GYPB-209ENST00000508618 SMIM5Q71RC9 77 aa-0.66□□□□□ -2.52
GYPB-209ENST00000508618 ANP32BQ92688 251 aaKnown RBP-0.66□□□□□ -2.52
GYPB-209ENST00000508618 USMG5Q96IX5 58 aa-0.66□□□□□ -2.52
GYPB-209ENST00000508618 CCDC167Q9P0B6 97 aa-0.66□□□□□ -2.52
GYPB-209ENST00000508618 RICTORQ6R327 1708 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 MAP3K1Q13233 1512 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 UGGT2Q9NYU1 1516 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 CHKB-CPT1BH3BT56 60 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 MT-ATP8P03928 68 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 IGLC1P0CG04 106 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 HTN3P15516 51 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 B2MP61769 119 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 DEFB133Q30KQ1 61 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 H1FX-AS1Q4G0G2 97 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 MRPL54Q6P161 138 aaKnown RBP-0.67□□□□□ -2.52
GYPB-209ENST00000508618 TMEM263Q8WUH6 116 aaKnown RBP-0.67□□□□□ -2.52
GYPB-209ENST00000508618 COPS9Q8WXC6 57 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 LEAP2Q969E1 77 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 SERP1Q9Y6X1 66 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 ARL2-SNX15V9GYD0 113 aa-0.67□□□□□ -2.52
GYPB-209ENST00000508618 AGLP35573 1532 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 LOC285095A0A1B0GVY8 99 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 ABCA8O94911 1581 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 TNP1P09430 55 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 SPART-AS1P0CW21 52 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 ARPC4P59998 168 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 DR1Q01658 176 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 SFTA2Q6UW10 78 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 WFDC13Q8IUB5 93 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 MYOZ3Q8TDC0 251 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 PYDC1Q8WXC3 89 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 PFDN5Q99471 154 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 RERGLQ9H628 205 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 NXT2Q9NPJ8 142 aaKnown RBP-0.68□□□□□ -2.52
GYPB-209ENST00000508618 MYO5CQ9NQX4 1742 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 SCRIBQ14160 1630 aa-0.68□□□□□ -2.52
GYPB-209ENST00000508618 MROH2AA6NES4 1674 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 ABCC3O15438 1527 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 FAM25AB3EWG3 89 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 FAM25CB3EWG5 89 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 FAM25GB3EWG6 89 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 HTN1P15515 57 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 SEC11AP67812 179 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 CATR1Q13166 79 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 FAM167A-AS1Q96KT0 104 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 SPRR4Q96PI1 79 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 PRO1933Q9H354 126 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 LINC00474Q9P2X8 69 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 UQCR10Q9UDW1 63 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 CD163L1Q9NR16 1453 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 IQGAP1P46940 1657 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 ZFYVE16Q7Z3T8 1539 aa-0.69□□□□□ -2.52
GYPB-209ENST00000508618 DIP2BQ9P265 1576 aa-0.7□□□□□ -2.52
GYPB-209ENST00000508618 ABCC5O15440 1437 aa-0.7□□□□□ -2.52
GYPB-209ENST00000508618 FAM223BA6NKX1 122 aa-0.7□□□□□ -2.52
GYPB-209ENST00000508618 APELAP0DMC3 54 aa-0.7□□□□□ -2.52
GYPB-209ENST00000508618 COMMD6Q7Z4G1 85 aa-0.7□□□□□ -2.52
GYPB-209ENST00000508618 C9orf62Q8N4C0 152 aa-0.7□□□□□ -2.52
GYPB-209ENST00000508618 PPP3R2Q96LZ3 170 aa-0.7□□□□□ -2.52
GYPB-209ENST00000508618 CDC42SE2Q9NRR3 84 aa-0.7□□□□□ -2.52
GYPB-209ENST00000508618 CCDC141Q6ZP82 1450 aa-0.7□□□□□ -2.52
GYPB-209ENST00000508618 C3P01024 1663 aa-0.7□□□□□ -2.52
GYPB-209ENST00000508618 KIF21BO75037 1637 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 ADCY10Q96PN6 1610 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 A0A1B0GU69 56 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 LOC100130705A0A1B0GUX0 176 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 GNG7O60262 68 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 Q56UQ5 140 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 MEIG1Q5JSS6 88 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 C5orf38Q86SI9 138 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 ARL11Q969Q4 196 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 SNRNP25Q9BV90 132 aaKnown RBP-0.71□□□□□ -2.52
GYPB-209ENST00000508618 SPANXDQ9BXN6 97 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 MANBALQ9NQG1 85 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 ABCC6O95255 1503 aa-0.71□□□□□ -2.52
GYPB-209ENST00000508618 EPRSP07814 1512 aaKnown RBP-0.71□□□□□ -2.52
GYPB-209ENST00000508618 INO80Q9ULG1 1556 aaPredicted RBP-0.71□□□□□ -2.52
GYPB-209ENST00000508618 EDC4Q6P2E9 1401 aaKnown RBP-0.72□□□□□ -2.52
GYPB-209ENST00000508618 ABCC2Q92887 1545 aa-0.72□□□□□ -2.52
GYPB-209ENST00000508618 A0A096LNI7 61 aa-0.72□□□□□ -2.52
GYPB-209ENST00000508618 A0A1B0GWA3 101 aa-0.72□□□□□ -2.52
GYPB-209ENST00000508618 I3L3M4 83 aa-0.72□□□□□ -2.52
GYPB-209ENST00000508618 Q0VG73 95 aa-0.72□□□□□ -2.52
GYPB-209ENST00000508618 WHAMMP3Q1A5X7 153 aa-0.72□□□□□ -2.52
GYPB-209ENST00000508618 HEPN1Q6WQI6 88 aa-0.72□□□□□ -2.52
GYPB-209ENST00000508618 C6orf201Q7Z4U5 140 aa-0.72□□□□□ -2.52
GYPB-209ENST00000508618 PP6455Q8WZ26 134 aa-0.72□□□□□ -2.52
GYPB-209ENST00000508618 DUOX1Q9NRD9 1551 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms