RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 BPY2O14599 106 aa13.94□□□□□ -0.18
SPCS3-203ENST00000507678 FUSP35637 526 aaKnown RBP eCLIP13.94□□□□□ -0.18
SPCS3-203ENST00000507678 A0A1W2PNM2 257 aa13.93□□□□□ -0.18
SPCS3-203ENST00000507678 TMEM254Q8TBM7 123 aa13.93□□□□□ -0.18
SPCS3-203ENST00000507678 CNBPP62633 177 aaKnown RBP13.93□□□□□ -0.18
SPCS3-203ENST00000507678 PLECQ15149 4684 aaKnown RBP13.92□□□□□ -0.18
SPCS3-203ENST00000507678 PHF5AQ7RTV0 110 aaKnown RBP13.91□□□□□ -0.18
SPCS3-203ENST00000507678 SRRM2Q9UQ35 2752 aaKnown RBP13.91□□□□□ -0.18
SPCS3-203ENST00000507678 ATP5EP56381 51 aaPredicted RBP13.91□□□□□ -0.18
SPCS3-203ENST00000507678 TNP2Q05952 138 aa13.88□□□□□ -0.19
SPCS3-203ENST00000507678 KRTAP11-1Q8IUC1 163 aa13.88□□□□□ -0.19
SPCS3-203ENST00000507678 NBDYA0A0U1RRE5 68 aa13.85□□□□□ -0.19
SPCS3-203ENST00000507678 IGKV4-1P06312 121 aa13.85□□□□□ -0.19
SPCS3-203ENST00000507678 C14orf177Q52M58 125 aa13.84□□□□□ -0.19
SPCS3-203ENST00000507678 Q8NBF4 154 aa13.84□□□□□ -0.19
SPCS3-203ENST00000507678 SMIM29Q86T20 159 aa13.84□□□□□ -0.19
SPCS3-203ENST00000507678 LINC00476Q8WZB0 136 aa13.83□□□□□ -0.2
SPCS3-203ENST00000507678 LRCOL1A6NCL2 159 aa13.8□□□□□ -0.2
SPCS3-203ENST00000507678 NUPR2A6NF83 97 aa13.8□□□□□ -0.2
SPCS3-203ENST00000507678 PANO1I0J062 215 aa13.79□□□□□ -0.2
SPCS3-203ENST00000507678 DYNC2H1Q8NCM8 4307 aaKnown RBP13.79□□□□□ -0.2
SPCS3-203ENST00000507678 C9orf163Q8N9P6 203 aa13.78□□□□□ -0.2
SPCS3-203ENST00000507678 PRKDCP78527 4128 aaKnown RBP13.77□□□□□ -0.21
SPCS3-203ENST00000507678 STARD9Q9P2P6 4700 aa13.77□□□□□ -0.21
SPCS3-203ENST00000507678 DEFB116Q30KQ4 102 aa13.76□□□□□ -0.21
SPCS3-203ENST00000507678 IGFL1Q6UW32 110 aa13.76□□□□□ -0.21
SPCS3-203ENST00000507678 UBE2AP49459 152 aa13.75□□□□□ -0.21
SPCS3-203ENST00000507678 SPRR4Q96PI1 79 aa13.74□□□□□ -0.21
SPCS3-203ENST00000507678 OCR1Q9BZK8 76 aa13.74□□□□□ -0.21
SPCS3-203ENST00000507678 Q6ZRN7 208 aaPredicted RBP13.72□□□□□ -0.21
SPCS3-203ENST00000507678 A0A087WSZ3 146 aa13.68□□□□□ -0.22
SPCS3-203ENST00000507678 K7EQZ3 153 aa13.68□□□□□ -0.22
SPCS3-203ENST00000507678 MEGF8Q7Z7M0 2845 aa13.68□□□□□ -0.22
SPCS3-203ENST00000507678 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.67□□□□□ -0.22
SPCS3-203ENST00000507678 DSCR10P59022 87 aa13.67□□□□□ -0.22
SPCS3-203ENST00000507678 FAM30AQ9NZY2 134 aa13.67□□□□□ -0.22
SPCS3-203ENST00000507678 A0A1B0GW54 56 aa13.66□□□□□ -0.22
SPCS3-203ENST00000507678 KMT2AQ03164 3969 aa13.63□□□□□ -0.23
SPCS3-203ENST00000507678 PMAIP1Q13794 54 aa13.62□□□□□ -0.23
SPCS3-203ENST00000507678 PRR15Q8IV56 129 aa13.61□□□□□ -0.23
SPCS3-203ENST00000507678 hDV103S1A0JD37 113 aa13.6□□□□□ -0.23
SPCS3-203ENST00000507678 A0A087WTM6 91 aa13.59□□□□□ -0.23
SPCS3-203ENST00000507678 TGP01266 2768 aa13.59□□□□□ -0.23
SPCS3-203ENST00000507678 PSPHP1O15172 72 aa13.58□□□□□ -0.24
SPCS3-203ENST00000507678 RPL37AP61513 92 aaKnown RBP13.58□□□□□ -0.24
SPCS3-203ENST00000507678 VPS13DQ5THJ4 4388 aa13.57□□□□□ -0.24
SPCS3-203ENST00000507678 C1orf64Q8NEQ6 169 aa13.57□□□□□ -0.24
SPCS3-203ENST00000507678 DNHD1Q96M86 4753 aa13.56□□□□□ -0.24
SPCS3-203ENST00000507678 SPACA4Q8TDM5 124 aa13.56□□□□□ -0.24
SPCS3-203ENST00000507678 IGLV8-61A0A075B6I0 122 aa13.55□□□□□ -0.24
SPCS3-203ENST00000507678 H0Y9J4 135 aa13.55□□□□□ -0.24
SPCS3-203ENST00000507678 WFDC13Q8IUB5 93 aa13.53□□□□□ -0.24
SPCS3-203ENST00000507678 RTL8CO15255 209 aa13.52□□□□□ -0.24
SPCS3-203ENST00000507678 IGLV9-49A0A0B4J1Y8 123 aa13.52□□□□□ -0.25
SPCS3-203ENST00000507678 Q1T7F1 81 aa13.52□□□□□ -0.25
SPCS3-203ENST00000507678 PRR4Q16378 134 aa13.51□□□□□ -0.25
SPCS3-203ENST00000507678 DNAH2Q9P225 4427 aa13.49□□□□□ -0.25
SPCS3-203ENST00000507678 HCG22E2RYF7 251 aa13.49□□□□□ -0.25
SPCS3-203ENST00000507678 SPRR1BP22528 89 aa13.49□□□□□ -0.25
SPCS3-203ENST00000507678 HECTD4Q9Y4D8 3996 aa13.48□□□□□ -0.25
SPCS3-203ENST00000507678 KRTAP13-1Q8IUC0 172 aa13.47□□□□□ -0.25
SPCS3-203ENST00000507678 TRAV22A0A0B4J277 110 aa13.47□□□□□ -0.25
SPCS3-203ENST00000507678 FRAS1Q86XX4 4008 aa13.45□□□□□ -0.26
SPCS3-203ENST00000507678 LY6G6CO95867 125 aa13.45□□□□□ -0.26
SPCS3-203ENST00000507678 A8MU10 97 aa13.44□□□□□ -0.26
SPCS3-203ENST00000507678 ANAPC11Q9NYG5 84 aa13.43□□□□□ -0.26
SPCS3-203ENST00000507678 Q6ZR54 194 aa13.42□□□□□ -0.26
SPCS3-203ENST00000507678 PSORS1C2Q9UIG4 136 aa13.42□□□□□ -0.26
SPCS3-203ENST00000507678 IGLV5-52A0A0A0MRZ9 124 aa13.41□□□□□ -0.26
SPCS3-203ENST00000507678 LCE6AA0A183 80 aa13.4□□□□□ -0.26
SPCS3-203ENST00000507678 FBN3Q75N90 2809 aa13.39□□□□□ -0.27
SPCS3-203ENST00000507678 A8MUN3 132 aa13.39□□□□□ -0.27
SPCS3-203ENST00000507678 C1orf134Q5TEV5 83 aa13.39□□□□□ -0.27
SPCS3-203ENST00000507678 ZCCHC13Q8WW36 166 aaKnown RBP13.38□□□□□ -0.27
SPCS3-203ENST00000507678 LINC00472Q9H8W2 130 aa13.35□□□□□ -0.27
SPCS3-203ENST00000507678 MOBPQ13875 183 aa13.31□□□□□ -0.28
SPCS3-203ENST00000507678 CASC2Q6XLA1 102 aa13.31□□□□□ -0.28
SPCS3-203ENST00000507678 DNAH8Q96JB1 4490 aa13.3□□□□□ -0.28
SPCS3-203ENST00000507678 A8MWP4 228 aa13.3□□□□□ -0.28
SPCS3-203ENST00000507678 PLAC8Q9NZF1 115 aa13.3□□□□□ -0.28
SPCS3-203ENST00000507678 DNAH17Q9UFH2 4485 aa13.3□□□□□ -0.28
SPCS3-203ENST00000507678 CYP4F30PQ9H0H9 118 aa13.28□□□□□ -0.28
SPCS3-203ENST00000507678 CD164Q04900 197 aa13.27□□□□□ -0.28
SPCS3-203ENST00000507678 ZNF861PO60384 105 aa13.26□□□□□ -0.29
SPCS3-203ENST00000507678 Q5VV11 94 aa13.26□□□□□ -0.29
SPCS3-203ENST00000507678 DNAH6Q9C0G6 4158 aa13.25□□□□□ -0.29
SPCS3-203ENST00000507678 KRTAP29-1A8MX34 341 aaPredicted RBP13.25□□□□□ -0.29
SPCS3-203ENST00000507678 WWC2-AS2Q96NR7 200 aa13.25□□□□□ -0.29
SPCS3-203ENST00000507678 LINC00483Q53H64 154 aa13.24□□□□□ -0.29
SPCS3-203ENST00000507678 ZNF706Q9Y5V0 76 aaPredicted RBP13.24□□□□□ -0.29
SPCS3-203ENST00000507678 LINC00208Q96KT6 92 aa13.21□□□□□ -0.29
SPCS3-203ENST00000507678 KRTAP10-2P60368 255 aa13.2□□□□□ -0.3
SPCS3-203ENST00000507678 NDUFB1O75438 58 aa13.19□□□□□ -0.3
SPCS3-203ENST00000507678 MP68P56378 58 aa13.19□□□□□ -0.3
SPCS3-203ENST00000507678 CHKB-CPT1BH3BT56 60 aa13.19□□□□□ -0.3
SPCS3-203ENST00000507678 Q96NJ1 140 aa13.18□□□□□ -0.3
SPCS3-203ENST00000507678 MMP24-AS1A0A0U1RRL7 71 aa13.16□□□□□ -0.3
SPCS3-203ENST00000507678 SPTSSBQ8NFR3 76 aa13.16□□□□□ -0.3
SPCS3-203ENST00000507678 H0Y9P7 68 aa13.16□□□□□ -0.3
SPCS3-203ENST00000507678 IGLV7-43P04211 117 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms