RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 UQCRHP07919 91 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 PSMG4Q5JS54 123 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 Q8IZM0 81 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 LCN9Q8WX39 176 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 LINC01600Q96MT4 127 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 VAMP8Q9BV40 100 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 LINC00846Q9NV44 126 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 ADAMTS12P58397 1594 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 ABCC3O15438 1527 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 POLA1P09884 1462 aaPredicted RBP0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 VPS13BQ7Z7G8 4022 aa0.22□□□□□ -2.37
TOPBP1-204ENST00000505804 DNAH8Q96JB1 4490 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 USP32Q8NFA0 1604 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 TRBV7-4A0A0J9YYF1 115 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 C7orf77A4D0Y5 90 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 SPRR2EP22531 72 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 SPRR2DP22532 72 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 SPRR2BP35325 72 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 SPRR2AP35326 72 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 PIGYQ3MUY2 71 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 SMIM5Q71RC9 77 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 FDCSPQ8NFU4 85 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 ATP10BO94823 1461 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 ERVK-7P63135 1459 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 LRRC9Q6ZRR7 1453 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 LRRC37AA6NMS7 1700 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 FMN2Q9NZ56 1722 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 CEP162Q5TB80 1403 aa0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 EDC4Q6P2E9 1401 aaKnown RBP0.21□□□□□ -2.38
TOPBP1-204ENST00000505804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.2□□□□□ -2.38
TOPBP1-204ENST00000505804 DUOX2Q9NRD8 1548 aa0.2□□□□□ -2.38
TOPBP1-204ENST00000505804 USF3Q68DE3 2245 aa0.2□□□□□ -2.38
TOPBP1-204ENST00000505804 UQCRHLA0A096LP55 91 aa0.2□□□□□ -2.38
TOPBP1-204ENST00000505804 LINC00959A0A1B0GUT2 108 aa0.2□□□□□ -2.38
TOPBP1-204ENST00000505804 WFDC2Q14508 124 aa0.2□□□□□ -2.38
TOPBP1-204ENST00000505804 QSER1Q2KHR3 1735 aa0.2□□□□□ -2.38
TOPBP1-204ENST00000505804 NKTRP30414 1462 aaKnown RBP0.2□□□□□ -2.38
TOPBP1-204ENST00000505804 CROCC2H7BZ55 1655 aa0.2□□□□□ -2.38
TOPBP1-204ENST00000505804 FLGP20930 4061 aaPredicted RBP0.2□□□□□ -2.38
TOPBP1-204ENST00000505804 DNAJC13O75165 2243 aa0.19□□□□□ -2.38
TOPBP1-204ENST00000505804 DNMBPQ6XZF7 1577 aa0.19□□□□□ -2.38
TOPBP1-204ENST00000505804 RGPD2P0DJD1 1756 aa0.19□□□□□ -2.38
TOPBP1-204ENST00000505804 RGPD1P0DJD0 1748 aa0.19□□□□□ -2.38
TOPBP1-204ENST00000505804 TJP1Q07157 1748 aa0.19□□□□□ -2.38
TOPBP1-204ENST00000505804 FXYD6-FXYD2A0A087WZ82 144 aa0.19□□□□□ -2.38
TOPBP1-204ENST00000505804 H3BQF6 201 aa0.19□□□□□ -2.38
TOPBP1-204ENST00000505804 SPINK1P00995 79 aa0.19□□□□□ -2.38
TOPBP1-204ENST00000505804 FAUP35544 74 aaKnown RBP0.19□□□□□ -2.38
TOPBP1-204ENST00000505804 UGGT1Q9NYU2 1555 aa0.19□□□□□ -2.38
TOPBP1-204ENST00000505804 MAGI3Q5TCQ9 1506 aa0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 KIF14Q15058 1648 aa0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 NRXN3Q9Y4C0 1643 aa0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 H0Y9P7 68 aa0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 CFDP00746 253 aaPredicted RBP0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 GYPAP02724 150 aa0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 ARMS2P0C7Q2 107 aa0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 ETDBQ3ZM63 59 aa0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 Q5VSD8 79 aa0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 C6orf201Q7Z4U5 140 aa0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 SAMD9Q5K651 1589 aa0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 SUPT6HQ7KZ85 1726 aaKnown RBP0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 TNRC6CQ9HCJ0 1690 aaKnown RBP0.18□□□□□ -2.38
TOPBP1-204ENST00000505804 SYNE1Q8NF91 8797 aaKnown RBP0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 A0A1B0GU69 56 aa0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 HFM1A2PYH4 1435 aa0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 F8WEM9 126 aa0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 COX6B1P14854 86 aa0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 ZNF720Q7Z2F6 126 aa0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 TIAM2Q8IVF5 1701 aa0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 DEFB107AQ8IZN7 70 aa0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 C20orf78Q9BR46 151 aa0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 V9GYS6 101 aa0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 GOLGA4Q13439 2230 aaKnown RBP0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 BCORQ6W2J9 1755 aa0.17□□□□□ -2.38
TOPBP1-204ENST00000505804 CCDC141Q6ZP82 1450 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 MAST1Q9Y2H9 1570 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 K7EQZ3 153 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 SPRR1AP35321 89 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 GNGT1P63211 74 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 HMGN3Q15651 99 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 DEFB109BQ30KR1 87 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 Q9H521 79 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 PSENENQ9NZ42 101 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 HIGD1BQ9P298 99 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 U3KQA8 63 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 URB2Q14146 1524 aaKnown RBP0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 UGGT2Q9NYU1 1516 aa0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 POLR1AO95602 1720 aaPredicted RBP0.16□□□□□ -2.38
TOPBP1-204ENST00000505804 LTN1O94822 1766 aa0.15□□□□□ -2.39
TOPBP1-204ENST00000505804 LOC730098B7Z3J9 87 aa0.15□□□□□ -2.39
TOPBP1-204ENST00000505804 SMR3BP02814 79 aaPredicted RBP0.15□□□□□ -2.39
TOPBP1-204ENST00000505804 ATP7BP35670 1465 aa0.15□□□□□ -2.39
TOPBP1-204ENST00000505804 ARHGAP35Q9NRY4 1499 aa0.15□□□□□ -2.39
TOPBP1-204ENST00000505804 ZNF831Q5JPB2 1677 aa0.14□□□□□ -2.39
TOPBP1-204ENST00000505804 D6R8Y8 96 aa0.14□□□□□ -2.39
TOPBP1-204ENST00000505804 LEPROTL1O95214 131 aa0.14□□□□□ -2.39
TOPBP1-204ENST00000505804 ALKAL2Q6UX46 152 aa0.14□□□□□ -2.39
TOPBP1-204ENST00000505804 MUSTN1Q8IVN3 82 aa0.14□□□□□ -2.39
TOPBP1-204ENST00000505804 USMG5Q96IX5 58 aa0.14□□□□□ -2.39
TOPBP1-204ENST00000505804 UBE2D4Q9Y2X8 147 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms