RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 IGLV8-61A0A075B6I0 122 aa2.46□□□□□ -2.01
PCDH11X-208ENST00000504220 IGHV3OR16-9A0A0B4J2B5 98 aa2.46□□□□□ -2.01
PCDH11X-208ENST00000504220 H0Y9P7 68 aa2.46□□□□□ -2.01
PCDH11X-208ENST00000504220 EGFEM1PQ0D2K5 195 aa2.46□□□□□ -2.01
PCDH11X-208ENST00000504220 K7ERS5 55 aa2.46□□□□□ -2.02
PCDH11X-208ENST00000504220 IGLV1-51P01701 117 aa2.46□□□□□ -2.02
PCDH11X-208ENST00000504220 COX17Q14061 63 aa2.46□□□□□ -2.02
PCDH11X-208ENST00000504220 MDFIQ99750 246 aa2.46□□□□□ -2.02
PCDH11X-208ENST00000504220 Q9BRP9 147 aa2.46□□□□□ -2.02
PCDH11X-208ENST00000504220 CMYA5Q8N3K9 4069 aa2.46□□□□□ -2.02
PCDH11X-208ENST00000504220 FSHBP01225 129 aa2.46□□□□□ -2.02
PCDH11X-208ENST00000504220 C14orf177Q52M58 125 aa2.46□□□□□ -2.02
PCDH11X-208ENST00000504220 C1orf64Q8NEQ6 169 aa2.46□□□□□ -2.02
PCDH11X-208ENST00000504220 ATP5EP56381 51 aaPredicted RBP2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 LINC01556Q5JQF7 62 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 OCR1Q9BZK8 76 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 VWFP04275 2813 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 HCG22E2RYF7 251 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 SPAG11AQ6PDA7 123 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 DNHD1Q96M86 4753 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 IGKV2D-30A0A075B6S6 120 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 IGKV2-30P06310 120 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 REG3GQ6UW15 175 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 C7orf65Q6ZTY9 151 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 IGLV5-39A0A0G2JS06 123 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 RPL37AP61513 92 aaKnown RBP2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 PRAC1Q96KF2 57 aa2.45□□□□□ -2.02
PCDH11X-208ENST00000504220 A0A0G2JQZ4 141 aa2.44□□□□□ -2.02
PCDH11X-208ENST00000504220 A0A1W2PNN7 141 aa2.44□□□□□ -2.02
PCDH11X-208ENST00000504220 LINC01554Q52M75 96 aa2.44□□□□□ -2.02
PCDH11X-208ENST00000504220 ST20-AS1Q8NBB2 130 aa2.44□□□□□ -2.02
PCDH11X-208ENST00000504220 LINC00167Q96N53 147 aa2.44□□□□□ -2.02
PCDH11X-208ENST00000504220 ATP11AUNQ6ZP68 121 aa2.44□□□□□ -2.02
PCDH11X-208ENST00000504220 C7orf33Q8WU49 177 aa2.44□□□□□ -2.02
PCDH11X-208ENST00000504220 RTL8CO15255 209 aa2.43□□□□□ -2.02
PCDH11X-208ENST00000504220 C6orf48Q9UBA6 75 aa2.43□□□□□ -2.02
PCDH11X-208ENST00000504220 ERC2-IT1O76042 136 aa2.43□□□□□ -2.02
PCDH11X-208ENST00000504220 Q8N9P0 234 aaPredicted RBP2.43□□□□□ -2.02
PCDH11X-208ENST00000504220 A0A1B0GUV1 79 aa2.43□□□□□ -2.02
PCDH11X-208ENST00000504220 LOC101927531A0A1B0GV80 90 aa2.42□□□□□ -2.02
PCDH11X-208ENST00000504220 PLA2G1BP04054 148 aaKnown RBP2.42□□□□□ -2.02
PCDH11X-208ENST00000504220 DNAH3Q8TD57 4116 aa2.42□□□□□ -2.02
PCDH11X-208ENST00000504220 CHTF8P0CG12 524 aa2.41□□□□□ -2.02
PCDH11X-208ENST00000504220 KRTAP10-3P60369 221 aa2.41□□□□□ -2.02
PCDH11X-208ENST00000504220 SPACA4Q8TDM5 124 aa2.41□□□□□ -2.02
PCDH11X-208ENST00000504220 Q6ZQT0 140 aa2.41□□□□□ -2.02
PCDH11X-208ENST00000504220 Q75L30 129 aa2.41□□□□□ -2.02
PCDH11X-208ENST00000504220 CYP4F30PQ9H0H9 118 aa2.41□□□□□ -2.02
PCDH11X-208ENST00000504220 VPREB1P12018 145 aa2.4□□□□□ -2.02
PCDH11X-208ENST00000504220 FAM168BA1KXE4 195 aa2.4□□□□□ -2.03
PCDH11X-208ENST00000504220 CXCL6P80162 114 aa2.4□□□□□ -2.03
PCDH11X-208ENST00000504220 LINC00476Q8WZB0 136 aa2.4□□□□□ -2.03
PCDH11X-208ENST00000504220 ZNF706Q9Y5V0 76 aaPredicted RBP2.4□□□□□ -2.03
PCDH11X-208ENST00000504220 IGLV5-52A0A0A0MRZ9 124 aa2.39□□□□□ -2.03
PCDH11X-208ENST00000504220 TENM1Q9UKZ4 2725 aa2.39□□□□□ -2.03
PCDH11X-208ENST00000504220 IGLV5-45A0A087WSX0 123 aa2.39□□□□□ -2.03
PCDH11X-208ENST00000504220 A0A1B0GU69 56 aa2.39□□□□□ -2.03
PCDH11X-208ENST00000504220 A0A1W2PNM2 257 aa2.39□□□□□ -2.03
PCDH11X-208ENST00000504220 K7EQZ3 153 aa2.39□□□□□ -2.03
PCDH11X-208ENST00000504220 Q6ZR54 194 aa2.39□□□□□ -2.03
PCDH11X-208ENST00000504220 Q8NBF4 154 aa2.38□□□□□ -2.03
PCDH11X-208ENST00000504220 KMT2AQ03164 3969 aa2.38□□□□□ -2.03
PCDH11X-208ENST00000504220 Q8NAQ8 132 aa2.38□□□□□ -2.03
PCDH11X-208ENST00000504220 LIMD2Q9BT23 127 aa2.38□□□□□ -2.03
PCDH11X-208ENST00000504220 CDC42SE1Q9NRR8 79 aa2.38□□□□□ -2.03
PCDH11X-208ENST00000504220 DNAH7Q8WXX0 4024 aa2.38□□□□□ -2.03
PCDH11X-208ENST00000504220 ELOF1P60002 83 aaKnown RBP2.37□□□□□ -2.03
PCDH11X-208ENST00000504220 ANAPC11Q9NYG5 84 aa2.37□□□□□ -2.03
PCDH11X-208ENST00000504220 NUPR2A6NF83 97 aa2.37□□□□□ -2.03
PCDH11X-208ENST00000504220 CNBPP62633 177 aaKnown RBP2.37□□□□□ -2.03
PCDH11X-208ENST00000504220 Q6ZRX8 168 aa2.36□□□□□ -2.03
PCDH11X-208ENST00000504220 TENM3Q9P273 2699 aa2.36□□□□□ -2.03
PCDH11X-208ENST00000504220 SPINK7P58062 85 aa2.35□□□□□ -2.03
PCDH11X-208ENST00000504220 C1orf134Q5TEV5 83 aa2.35□□□□□ -2.03
PCDH11X-208ENST00000504220 A0A087X002 238 aa2.35□□□□□ -2.03
PCDH11X-208ENST00000504220 DNAH10OSP0CZ25 163 aa2.35□□□□□ -2.03
PCDH11X-208ENST00000504220 KRTAP10-11P60412 298 aa2.35□□□□□ -2.03
PCDH11X-208ENST00000504220 LCE2AQ5TA79 106 aaPredicted RBP2.35□□□□□ -2.03
PCDH11X-208ENST00000504220 SSBP3-AS1Q7Z2R9 100 aa2.35□□□□□ -2.03
PCDH11X-208ENST00000504220 LOC110117498A0A087WWA1 95 aa2.34□□□□□ -2.03
PCDH11X-208ENST00000504220 ACYP2P14621 99 aa2.34□□□□□ -2.03
PCDH11X-208ENST00000504220 COA5Q86WW8 74 aa2.34□□□□□ -2.03
PCDH11X-208ENST00000504220 IGLV6-57P01721 117 aa2.34□□□□□ -2.04
PCDH11X-208ENST00000504220 ROMO1P60602 79 aa2.34□□□□□ -2.04
PCDH11X-208ENST00000504220 Q8N377 158 aa2.34□□□□□ -2.04
PCDH11X-208ENST00000504220 SPINT4Q6UDR6 99 aa2.33□□□□□ -2.04
PCDH11X-208ENST00000504220 NOTCH2NLQ7Z3S9 236 aa2.33□□□□□ -2.04
PCDH11X-208ENST00000504220 LINC00528Q8N1L1 170 aa2.33□□□□□ -2.04
PCDH11X-208ENST00000504220 Q8NDZ9 215 aa2.33□□□□□ -2.04
PCDH11X-208ENST00000504220 CASC10Q5T4H9 136 aa2.33□□□□□ -2.04
PCDH11X-208ENST00000504220 IGFL1Q6UW32 110 aa2.33□□□□□ -2.04
PCDH11X-208ENST00000504220 PKD1L1Q8TDX9 2849 aa2.33□□□□□ -2.04
PCDH11X-208ENST00000504220 GIG44P09565 113 aaPredicted RBP2.33□□□□□ -2.04
PCDH11X-208ENST00000504220 PRR34Q9NV39 138 aa2.33□□□□□ -2.04
PCDH11X-208ENST00000504220 COL7A1Q02388 2944 aa2.32□□□□□ -2.04
PCDH11X-208ENST00000504220 K7EIL1 84 aa2.32□□□□□ -2.04
PCDH11X-208ENST00000504220 DSCR10P59022 87 aa2.32□□□□□ -2.04
PCDH11X-208ENST00000504220 Q96NJ1 140 aa2.32□□□□□ -2.04
PCDH11X-208ENST00000504220 TGP01266 2768 aa2.32□□□□□ -2.04
PCDH11X-208ENST00000504220 TP53AIP1Q9HCN2 124 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms