RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 NSD1Q96L73 2696 aaPredicted RBP4.77□□□□□ -1.65
PDGFC-203ENST00000502773 H0Y9P7 68 aa4.76□□□□□ -1.65
PDGFC-203ENST00000502773 Q8N377 158 aa4.76□□□□□ -1.65
PDGFC-203ENST00000502773 TEP1Q99973 2627 aaKnown RBP4.75□□□□□ -1.65
PDGFC-203ENST00000502773 CRYBG3Q68DQ2 2970 aa4.75□□□□□ -1.65
PDGFC-203ENST00000502773 SPRR4Q96PI1 79 aa4.75□□□□□ -1.65
PDGFC-203ENST00000502773 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
PDGFC-203ENST00000502773 ATRQ13535 2644 aa4.75□□□□□ -1.65
PDGFC-203ENST00000502773 LINC00313P59037 77 aa4.74□□□□□ -1.65
PDGFC-203ENST00000502773 IGLV8-61A0A075B6I0 122 aa4.74□□□□□ -1.65
PDGFC-203ENST00000502773 KRTAP4-16G5E9R7 235 aaPredicted RBP4.74□□□□□ -1.65
PDGFC-203ENST00000502773 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.73□□□□□ -1.65
PDGFC-203ENST00000502773 A0A096LNI7 61 aa4.73□□□□□ -1.65
PDGFC-203ENST00000502773 A8MU10 97 aa4.73□□□□□ -1.65
PDGFC-203ENST00000502773 Q9BRP9 147 aa4.73□□□□□ -1.65
PDGFC-203ENST00000502773 M0R2N4 97 aa4.73□□□□□ -1.65
PDGFC-203ENST00000502773 SPRR1BP22528 89 aa4.73□□□□□ -1.65
PDGFC-203ENST00000502773 C1orf134Q5TEV5 83 aa4.72□□□□□ -1.65
PDGFC-203ENST00000502773 Q5VV11 94 aa4.72□□□□□ -1.65
PDGFC-203ENST00000502773 ANK3Q12955 4377 aaKnown RBP4.72□□□□□ -1.65
PDGFC-203ENST00000502773 EPM2AB3EWF7 344 aa4.71□□□□□ -1.66
PDGFC-203ENST00000502773 H3BPC8 53 aa4.71□□□□□ -1.66
PDGFC-203ENST00000502773 COA5Q86WW8 74 aa4.71□□□□□ -1.66
PDGFC-203ENST00000502773 TENM4Q6N022 2769 aa4.71□□□□□ -1.66
PDGFC-203ENST00000502773 LINC00476Q8WZB0 136 aa4.71□□□□□ -1.66
PDGFC-203ENST00000502773 FAM168BA1KXE4 195 aa4.7□□□□□ -1.66
PDGFC-203ENST00000502773 HIVEP1P15822 2718 aa4.7□□□□□ -1.66
PDGFC-203ENST00000502773 TNP2Q05952 138 aa4.7□□□□□ -1.66
PDGFC-203ENST00000502773 CASC10Q5T4H9 136 aa4.69□□□□□ -1.66
PDGFC-203ENST00000502773 PHF5AQ7RTV0 110 aaKnown RBP4.69□□□□□ -1.66
PDGFC-203ENST00000502773 IGLV5-52A0A0A0MRZ9 124 aa4.68□□□□□ -1.66
PDGFC-203ENST00000502773 A0A087WTM6 91 aa4.68□□□□□ -1.66
PDGFC-203ENST00000502773 SPINT4Q6UDR6 99 aa4.68□□□□□ -1.66
PDGFC-203ENST00000502773 A0A1B0GU69 56 aa4.67□□□□□ -1.66
PDGFC-203ENST00000502773 PRLHP81277 87 aa4.67□□□□□ -1.66
PDGFC-203ENST00000502773 Q8N9P0 234 aaPredicted RBP4.67□□□□□ -1.66
PDGFC-203ENST00000502773 OCR1Q9BZK8 76 aa4.67□□□□□ -1.66
PDGFC-203ENST00000502773 GCN1Q92616 2671 aaKnown RBP4.67□□□□□ -1.66
PDGFC-203ENST00000502773 A0A1W2PNM2 257 aa4.67□□□□□ -1.66
PDGFC-203ENST00000502773 A0A1W2PNN7 141 aa4.67□□□□□ -1.66
PDGFC-203ENST00000502773 ST20-AS1Q8NBB2 130 aa4.67□□□□□ -1.66
PDGFC-203ENST00000502773 K7ERS5 55 aa4.67□□□□□ -1.66
PDGFC-203ENST00000502773 MOBPQ13875 183 aa4.67□□□□□ -1.66
PDGFC-203ENST00000502773 RTL8CO15255 209 aa4.66□□□□□ -1.66
PDGFC-203ENST00000502773 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
PDGFC-203ENST00000502773 IGFL1Q6UW32 110 aa4.66□□□□□ -1.66
PDGFC-203ENST00000502773 TP53AIP1Q9HCN2 124 aa4.66□□□□□ -1.66
PDGFC-203ENST00000502773 A0A087WSZ3 146 aa4.65□□□□□ -1.66
PDGFC-203ENST00000502773 NF1P21359 2839 aa4.65□□□□□ -1.67
PDGFC-203ENST00000502773 WWC2-AS2Q96NR7 200 aa4.65□□□□□ -1.67
PDGFC-203ENST00000502773 KRTAP21-3Q3LHN1 58 aa4.64□□□□□ -1.67
PDGFC-203ENST00000502773 SPACA4Q8TDM5 124 aa4.64□□□□□ -1.67
PDGFC-203ENST00000502773 Q75L30 129 aa4.64□□□□□ -1.67
PDGFC-203ENST00000502773 A8MWP4 228 aa4.64□□□□□ -1.67
PDGFC-203ENST00000502773 CSAG1Q6PB30 78 aa4.64□□□□□ -1.67
PDGFC-203ENST00000502773 K7EQZ3 153 aa4.63□□□□□ -1.67
PDGFC-203ENST00000502773 ZNF861PO60384 105 aa4.63□□□□□ -1.67
PDGFC-203ENST00000502773 KRTAP1-5Q9BYS1 174 aa4.63□□□□□ -1.67
PDGFC-203ENST00000502773 PLAC8Q9NZF1 115 aa4.63□□□□□ -1.67
PDGFC-203ENST00000502773 FLG2Q5D862 2391 aaPredicted RBP4.63□□□□□ -1.67
PDGFC-203ENST00000502773 SSBP3-AS1Q7Z2R9 100 aa4.62□□□□□ -1.67
PDGFC-203ENST00000502773 ZFHX3Q15911 3703 aa4.62□□□□□ -1.67
PDGFC-203ENST00000502773 LY6G6CO95867 125 aa4.62□□□□□ -1.67
PDGFC-203ENST00000502773 Q6ZRN7 208 aaPredicted RBP4.61□□□□□ -1.67
PDGFC-203ENST00000502773 NIPBLQ6KC79 2804 aaeCLIP4.61□□□□□ -1.67
PDGFC-203ENST00000502773 OTOGQ6ZRI0 2925 aa4.61□□□□□ -1.67
PDGFC-203ENST00000502773 A6NN06 94 aa4.61□□□□□ -1.67
PDGFC-203ENST00000502773 Q6ZR54 194 aa4.61□□□□□ -1.67
PDGFC-203ENST00000502773 CHTF8P0CG12 524 aa4.61□□□□□ -1.67
PDGFC-203ENST00000502773 LINC00483Q53H64 154 aa4.6□□□□□ -1.67
PDGFC-203ENST00000502773 NBEAL2Q6ZNJ1 2754 aa4.6□□□□□ -1.67
PDGFC-203ENST00000502773 SPINK7P58062 85 aa4.6□□□□□ -1.67
PDGFC-203ENST00000502773 KRTAP7-1Q8IUC3 87 aa4.6□□□□□ -1.67
PDGFC-203ENST00000502773 ADM2Q7Z4H4 148 aa4.6□□□□□ -1.67
PDGFC-203ENST00000502773 CSMD2Q7Z408 3487 aa4.6□□□□□ -1.67
PDGFC-203ENST00000502773 FLNBO75369 2602 aaKnown RBP4.59□□□□□ -1.67
PDGFC-203ENST00000502773 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.68
PDGFC-203ENST00000502773 UQCR11O14957 56 aa4.58□□□□□ -1.68
PDGFC-203ENST00000502773 DSCR10P59022 87 aa4.58□□□□□ -1.68
PDGFC-203ENST00000502773 IGLV9-49A0A0B4J1Y8 123 aa4.58□□□□□ -1.68
PDGFC-203ENST00000502773 SPINK1P00995 79 aa4.58□□□□□ -1.68
PDGFC-203ENST00000502773 MAST4O15021 2626 aa4.57□□□□□ -1.68
PDGFC-203ENST00000502773 IGLV7-43P04211 117 aa4.56□□□□□ -1.68
PDGFC-203ENST00000502773 KRTAP13-1Q8IUC0 172 aa4.56□□□□□ -1.68
PDGFC-203ENST00000502773 PSORS1C2Q9UIG4 136 aa4.55□□□□□ -1.68
PDGFC-203ENST00000502773 SPANXA2-OT1Q8N9U9 137 aa4.55□□□□□ -1.68
PDGFC-203ENST00000502773 LINC00472Q9H8W2 130 aa4.55□□□□□ -1.68
PDGFC-203ENST00000502773 DMBT1Q9UGM3 2413 aaPredicted RBP4.55□□□□□ -1.68
PDGFC-203ENST00000502773 IGHV6-1A0A0B4J1U7 121 aa4.54□□□□□ -1.68
PDGFC-203ENST00000502773 LCE6AA0A183 80 aa4.54□□□□□ -1.68
PDGFC-203ENST00000502773 VPS13CQ709C8 3753 aa4.54□□□□□ -1.68
PDGFC-203ENST00000502773 SPINK6Q6UWN8 80 aa4.54□□□□□ -1.68
PDGFC-203ENST00000502773 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.54□□□□□ -1.68
PDGFC-203ENST00000502773 ACYP2P14621 99 aa4.53□□□□□ -1.68
PDGFC-203ENST00000502773 AKAP9Q99996 3911 aa4.53□□□□□ -1.68
PDGFC-203ENST00000502773 A0A1B0GVX0 72 aa4.52□□□□□ -1.69
PDGFC-203ENST00000502773 STAB1Q9NY15 2570 aa4.52□□□□□ -1.69
PDGFC-203ENST00000502773 COL6A5A8TX70 2615 aa4.52□□□□□ -1.69
PDGFC-203ENST00000502773 ASB16-AS1Q495Z4 193 aa4.51□□□□□ -1.69
PDGFC-203ENST00000502773 C8orf17Q9NRJ1 99 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms