RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 Q8NBF4 154 aa9.29□□□□□ -0.92
NEAT1-201ENST00000499732 VPS13DQ5THJ4 4388 aa9.29□□□□□ -0.92
NEAT1-201ENST00000499732 A0A1W2PNM2 257 aa9.28□□□□□ -0.92
NEAT1-201ENST00000499732 C1orf137Q5JT78 98 aa9.28□□□□□ -0.92
NEAT1-201ENST00000499732 SPRR4Q96PI1 79 aa9.28□□□□□ -0.92
NEAT1-201ENST00000499732 HYDINQ4G0P3 5121 aa9.28□□□□□ -0.92
NEAT1-201ENST00000499732 NBDYA0A0U1RRE5 68 aa9.27□□□□□ -0.93
NEAT1-201ENST00000499732 RPL37AP8A6NKH3 93 aa9.25□□□□□ -0.93
NEAT1-201ENST00000499732 SMIM29Q86T20 159 aa9.24□□□□□ -0.93
NEAT1-201ENST00000499732 FAM168BA1KXE4 195 aa9.23□□□□□ -0.93
NEAT1-201ENST00000499732 MRPL55Q7Z7F7 128 aaKnown RBP9.22□□□□□ -0.93
NEAT1-201ENST00000499732 ST20-AS1Q8NBB2 130 aa9.22□□□□□ -0.93
NEAT1-201ENST00000499732 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
NEAT1-201ENST00000499732 KRTAP7-1Q8IUC3 87 aa9.21□□□□□ -0.93
NEAT1-201ENST00000499732 PRO0628Q9UI54 55 aa9.21□□□□□ -0.93
NEAT1-201ENST00000499732 LINC00336Q6ZUF6 198 aa9.2□□□□□ -0.94
NEAT1-201ENST00000499732 FAM30AQ9NZY2 134 aa9.2□□□□□ -0.94
NEAT1-201ENST00000499732 PSCAO43653 123 aa9.19□□□□□ -0.94
NEAT1-201ENST00000499732 DSCR10P59022 87 aa9.19□□□□□ -0.94
NEAT1-201ENST00000499732 LINC00474Q9P2X8 69 aa9.19□□□□□ -0.94
NEAT1-201ENST00000499732 UBE2BP63146 152 aa9.19□□□□□ -0.94
NEAT1-201ENST00000499732 REG3GQ6UW15 175 aa9.18□□□□□ -0.94
NEAT1-201ENST00000499732 Q6ZR54 194 aa9.18□□□□□ -0.94
NEAT1-201ENST00000499732 K7EQZ3 153 aa9.15□□□□□ -0.94
NEAT1-201ENST00000499732 FAM229BQ4G0N7 80 aa9.15□□□□□ -0.94
NEAT1-201ENST00000499732 Q6ZRN7 208 aaPredicted RBP9.15□□□□□ -0.94
NEAT1-201ENST00000499732 ZCCHC13Q8WW36 166 aaKnown RBP9.15□□□□□ -0.94
NEAT1-201ENST00000499732 KMT2AQ03164 3969 aa9.15□□□□□ -0.94
NEAT1-201ENST00000499732 CNBPP62633 177 aaKnown RBP9.14□□□□□ -0.95
NEAT1-201ENST00000499732 C14orf177Q52M58 125 aa9.14□□□□□ -0.95
NEAT1-201ENST00000499732 DNAH6Q9C0G6 4158 aa9.13□□□□□ -0.95
NEAT1-201ENST00000499732 HCG22E2RYF7 251 aa9.13□□□□□ -0.95
NEAT1-201ENST00000499732 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
NEAT1-201ENST00000499732 LRCOL1A6NCL2 159 aa9.12□□□□□ -0.95
NEAT1-201ENST00000499732 FRAS1Q86XX4 4008 aa9.12□□□□□ -0.95
NEAT1-201ENST00000499732 IGFL1Q6UW32 110 aa9.1□□□□□ -0.95
NEAT1-201ENST00000499732 hDV103S1A0JD37 113 aa9.1□□□□□ -0.95
NEAT1-201ENST00000499732 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
NEAT1-201ENST00000499732 DNAH2Q9P225 4427 aa9.09□□□□□ -0.95
NEAT1-201ENST00000499732 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.08□□□□□ -0.96
NEAT1-201ENST00000499732 MPLKIPQ8TAP9 179 aa9.08□□□□□ -0.96
NEAT1-201ENST00000499732 C16orf90A8MZG2 172 aa9.07□□□□□ -0.96
NEAT1-201ENST00000499732 CYP4F30PQ9H0H9 118 aa9.06□□□□□ -0.96
NEAT1-201ENST00000499732 HECTD4Q9Y4D8 3996 aa9.06□□□□□ -0.96
NEAT1-201ENST00000499732 A0A096LNI7 61 aa9.05□□□□□ -0.96
NEAT1-201ENST00000499732 NDUFB1O75438 58 aa9.05□□□□□ -0.96
NEAT1-201ENST00000499732 A0A087WTM6 91 aa9.04□□□□□ -0.96
NEAT1-201ENST00000499732 C1orf64Q8NEQ6 169 aa9.03□□□□□ -0.96
NEAT1-201ENST00000499732 PRLHP81277 87 aa9.03□□□□□ -0.96
NEAT1-201ENST00000499732 C9orf163Q8N9P6 203 aa9.03□□□□□ -0.96
NEAT1-201ENST00000499732 BRK1Q8WUW1 75 aa9.03□□□□□ -0.96
NEAT1-201ENST00000499732 HERC2O95714 4834 aa9.02□□□□□ -0.96
NEAT1-201ENST00000499732 DNAH17Q9UFH2 4485 aa9.02□□□□□ -0.97
NEAT1-201ENST00000499732 A0A087WSZ3 146 aa9.02□□□□□ -0.97
NEAT1-201ENST00000499732 IGKV2-24A0A0C4DH68 120 aa9.02□□□□□ -0.97
NEAT1-201ENST00000499732 Q1T7F1 81 aa9.01□□□□□ -0.97
NEAT1-201ENST00000499732 MP68P56378 58 aa9.01□□□□□ -0.97
NEAT1-201ENST00000499732 A0A1W2PNN7 141 aa9□□□□□ -0.97
NEAT1-201ENST00000499732 H0Y9J4 135 aa9□□□□□ -0.97
NEAT1-201ENST00000499732 SPRR1BP22528 89 aa9□□□□□ -0.97
NEAT1-201ENST00000499732 UBE2AP49459 152 aa9□□□□□ -0.97
NEAT1-201ENST00000499732 PKIGQ9Y2B9 76 aa9□□□□□ -0.97
NEAT1-201ENST00000499732 A0A0G2JQZ4 141 aa8.99□□□□□ -0.97
NEAT1-201ENST00000499732 KRTAP29-1A8MX34 341 aaPredicted RBP8.98□□□□□ -0.97
NEAT1-201ENST00000499732 WFDC13Q8IUB5 93 aa8.98□□□□□ -0.97
NEAT1-201ENST00000499732 H3BPC8 53 aa8.98□□□□□ -0.97
NEAT1-201ENST00000499732 CHTF8P0CG12 524 aa8.98□□□□□ -0.97
NEAT1-201ENST00000499732 TRAV22A0A0B4J277 110 aa8.97□□□□□ -0.97
NEAT1-201ENST00000499732 RTL8CO15255 209 aa8.97□□□□□ -0.97
NEAT1-201ENST00000499732 DEFB116Q30KQ4 102 aa8.96□□□□□ -0.97
NEAT1-201ENST00000499732 PRR15Q8IV56 129 aa8.94□□□□□ -0.98
NEAT1-201ENST00000499732 FAT2Q9NYQ8 4349 aa8.94□□□□□ -0.98
NEAT1-201ENST00000499732 A8MWP4 228 aa8.94□□□□□ -0.98
NEAT1-201ENST00000499732 SPANXA2-OT1Q8N9U9 137 aa8.94□□□□□ -0.98
NEAT1-201ENST00000499732 KRTAP17-1Q9BYP8 105 aa8.94□□□□□ -0.98
NEAT1-201ENST00000499732 PANO1I0J062 215 aa8.93□□□□□ -0.98
NEAT1-201ENST00000499732 CASC2Q6XLA1 102 aa8.93□□□□□ -0.98
NEAT1-201ENST00000499732 RPL37AP61513 92 aaKnown RBP8.92□□□□□ -0.98
NEAT1-201ENST00000499732 LINC00472Q9H8W2 130 aa8.92□□□□□ -0.98
NEAT1-201ENST00000499732 LINC00208Q96KT6 92 aa8.91□□□□□ -0.98
NEAT1-201ENST00000499732 A0A1B0GVY2 172 aa8.91□□□□□ -0.98
NEAT1-201ENST00000499732 H0Y9P7 68 aa8.91□□□□□ -0.98
NEAT1-201ENST00000499732 PHF5AQ7RTV0 110 aaKnown RBP8.91□□□□□ -0.98
NEAT1-201ENST00000499732 V9GYY9 64 aa8.91□□□□□ -0.98
NEAT1-201ENST00000499732 IGLV5-52A0A0A0MRZ9 124 aa8.9□□□□□ -0.98
NEAT1-201ENST00000499732 DNAH11Q96DT5 4516 aa8.89□□□□□ -0.99
NEAT1-201ENST00000499732 KIAA1109Q2LD37 5005 aa8.89□□□□□ -0.99
NEAT1-201ENST00000499732 PKHD1P08F94 4074 aa8.89□□□□□ -0.99
NEAT1-201ENST00000499732 KRTAP11-1Q8IUC1 163 aa8.89□□□□□ -0.99
NEAT1-201ENST00000499732 SPACA4Q8TDM5 124 aa8.89□□□□□ -0.99
NEAT1-201ENST00000499732 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.89□□□□□ -0.99
NEAT1-201ENST00000499732 PRR4Q16378 134 aa8.88□□□□□ -0.99
NEAT1-201ENST00000499732 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
NEAT1-201ENST00000499732 C1orf195Q5TG92 126 aa8.86□□□□□ -0.99
NEAT1-201ENST00000499732 DNAH5Q8TE73 4624 aa8.84□□□□□ -0.99
NEAT1-201ENST00000499732 KRTAP10-2P60368 255 aa8.84□□□□□ -0.99
NEAT1-201ENST00000499732 MMP24-AS1A0A0U1RRL7 71 aa8.83□□□□□ -1
NEAT1-201ENST00000499732 KRTAP13-1Q8IUC0 172 aa8.83□□□□□ -1
NEAT1-201ENST00000499732 DNAH8Q96JB1 4490 aa8.83□□□□□ -1
NEAT1-201ENST00000499732 PKD1P98161 4303 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms