RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 LINC00846Q9NV44 126 aa16.27■□□□□ 0.19
HOXB3-212ENST00000498678 C14orf132Q9NPU4 83 aa16.26■□□□□ 0.19
HOXB3-212ENST00000498678 LCE6AA0A183 80 aa16.26■□□□□ 0.19
HOXB3-212ENST00000498678 JMJD7-PLA2G4BH0Y9G9 81 aa16.24■□□□□ 0.19
HOXB3-212ENST00000498678 FAM19A1Q7Z5A9 133 aa16.24■□□□□ 0.19
HOXB3-212ENST00000498678 H7BZZ5 65 aa16.23■□□□□ 0.19
HOXB3-212ENST00000498678 FP248Q71RG6 208 aaPredicted RBP16.23■□□□□ 0.19
HOXB3-212ENST00000498678 PLAC8Q9NZF1 115 aa16.22■□□□□ 0.19
HOXB3-212ENST00000498678 LAMTOR3Q9UHA4 124 aa16.22■□□□□ 0.19
HOXB3-212ENST00000498678 ERC2-IT1O76042 136 aa16.21■□□□□ 0.19
HOXB3-212ENST00000498678 PRLHP81277 87 aa16.2■□□□□ 0.18
HOXB3-212ENST00000498678 C20orf197Q8N268 126 aa16.2■□□□□ 0.18
HOXB3-212ENST00000498678 ATP5EP56381 51 aaPredicted RBP16.2■□□□□ 0.18
HOXB3-212ENST00000498678 SACSQ9NZJ4 4579 aa16.19■□□□□ 0.18
HOXB3-212ENST00000498678 DNAH11Q96DT5 4516 aa16.18■□□□□ 0.18
HOXB3-212ENST00000498678 LINC01547P58512 204 aaPredicted RBP16.18■□□□□ 0.18
HOXB3-212ENST00000498678 KLKP1Q107X0 134 aa16.18■□□□□ 0.18
HOXB3-212ENST00000498678 DEFB105AQ8NG35 78 aa16.17■□□□□ 0.18
HOXB3-212ENST00000498678 TRAV7A0A075B6U4 112 aa16.17■□□□□ 0.18
HOXB3-212ENST00000498678 Q8N377 158 aa16.17■□□□□ 0.18
HOXB3-212ENST00000498678 ST20-AS1Q8NBB2 130 aa16.17■□□□□ 0.18
HOXB3-212ENST00000498678 FAT2Q9NYQ8 4349 aa16.17■□□□□ 0.18
HOXB3-212ENST00000498678 RBM3P98179 157 aaKnown RBP16.16■□□□□ 0.18
HOXB3-212ENST00000498678 H0Y9J4 135 aa16.14■□□□□ 0.17
HOXB3-212ENST00000498678 NDUFC1O43677 76 aa16.14■□□□□ 0.17
HOXB3-212ENST00000498678 BRK1Q8WUW1 75 aa16.14■□□□□ 0.17
HOXB3-212ENST00000498678 IGLV5-48A0A075B6I7 105 aa16.13■□□□□ 0.17
HOXB3-212ENST00000498678 FAM30AQ9NZY2 134 aa16.11■□□□□ 0.17
HOXB3-212ENST00000498678 HIGD2AQ9BW72 106 aa16.11■□□□□ 0.17
HOXB3-212ENST00000498678 DNAH5Q8TE73 4624 aa16.11■□□□□ 0.17
HOXB3-212ENST00000498678 CCKP06307 115 aa16.1■□□□□ 0.17
HOXB3-212ENST00000498678 UBE2AP49459 152 aa16.09■□□□□ 0.17
HOXB3-212ENST00000498678 PKD1P98161 4303 aa16.08■□□□□ 0.16
HOXB3-212ENST00000498678 KRTAP10-1P60331 282 aa16.07■□□□□ 0.16
HOXB3-212ENST00000498678 KRTAP13-1Q8IUC0 172 aa16.07■□□□□ 0.16
HOXB3-212ENST00000498678 LOC110117498A0A087WWA1 95 aa16.06■□□□□ 0.16
HOXB3-212ENST00000498678 A0A0U1RQV1 116 aa16.06■□□□□ 0.16
HOXB3-212ENST00000498678 Q6ZQT0 140 aa16.06■□□□□ 0.16
HOXB3-212ENST00000498678 Q6ZSA8 131 aa16.04■□□□□ 0.16
HOXB3-212ENST00000498678 PSORS1C2Q9UIG4 136 aa16.04■□□□□ 0.16
HOXB3-212ENST00000498678 TRBV7-4A0A0J9YYF1 115 aa16.03■□□□□ 0.16
HOXB3-212ENST00000498678 CIRBP-AS1Q8TBR5 109 aa16.03■□□□□ 0.16
HOXB3-212ENST00000498678 DNAH8Q96JB1 4490 aa16.01■□□□□ 0.15
HOXB3-212ENST00000498678 PDE6GP18545 87 aa16■□□□□ 0.15
HOXB3-212ENST00000498678 SMIM29Q86T20 159 aa15.98■□□□□ 0.15
HOXB3-212ENST00000498678 PMAIP1Q13794 54 aa15.97■□□□□ 0.15
HOXB3-212ENST00000498678 SCXQ7RTU7 201 aa15.97■□□□□ 0.15
HOXB3-212ENST00000498678 C1orf137Q5JT78 98 aa15.96■□□□□ 0.14
HOXB3-212ENST00000498678 F8WEM9 126 aa15.94■□□□□ 0.14
HOXB3-212ENST00000498678 UBL5Q9BZL1 73 aa15.94■□□□□ 0.14
HOXB3-212ENST00000498678 PRR15Q8IV56 129 aa15.93■□□□□ 0.14
HOXB3-212ENST00000498678 RYR2Q92736 4967 aa15.92■□□□□ 0.14
HOXB3-212ENST00000498678 HAMPP81172 84 aa15.91■□□□□ 0.14
HOXB3-212ENST00000498678 SPRR1BP22528 89 aa15.9■□□□□ 0.14
HOXB3-212ENST00000498678 SRRM2Q9UQ35 2752 aaKnown RBP15.88■□□□□ 0.13
HOXB3-212ENST00000498678 A0A1B0GVY2 172 aa15.87■□□□□ 0.13
HOXB3-212ENST00000498678 KMT2CQ8NEZ4 4911 aaKnown RBP15.87■□□□□ 0.13
HOXB3-212ENST00000498678 ZNF861PO60384 105 aa15.87■□□□□ 0.13
HOXB3-212ENST00000498678 CD164Q04900 197 aa15.84■□□□□ 0.13
HOXB3-212ENST00000498678 IGLV7-43P04211 117 aa15.83■□□□□ 0.12
HOXB3-212ENST00000498678 SNURFQ9Y675 71 aa15.82■□□□□ 0.12
HOXB3-212ENST00000498678 SPRR4Q96PI1 79 aa15.81■□□□□ 0.12
HOXB3-212ENST00000498678 IGLV8-61A0A075B6I0 122 aa15.8■□□□□ 0.12
HOXB3-212ENST00000498678 A0A1W2PNM2 257 aa15.77■□□□□ 0.12
HOXB3-212ENST00000498678 PKHD1P08F94 4074 aa15.77■□□□□ 0.12
HOXB3-212ENST00000498678 LINC00483Q53H64 154 aa15.75■□□□□ 0.11
HOXB3-212ENST00000498678 ZNF706Q9Y5V0 76 aaPredicted RBP15.75■□□□□ 0.11
HOXB3-212ENST00000498678 IGFL1Q6UW32 110 aa15.75■□□□□ 0.11
HOXB3-212ENST00000498678 CXCL6P80162 114 aa15.73■□□□□ 0.11
HOXB3-212ENST00000498678 A0A0G2JQZ4 141 aa15.73■□□□□ 0.11
HOXB3-212ENST00000498678 Q8NBF4 154 aa15.73■□□□□ 0.11
HOXB3-212ENST00000498678 LRP1BQ9NZR2 4599 aa15.72■□□□□ 0.11
HOXB3-212ENST00000498678 Q6ZVQ6 151 aa15.71■□□□□ 0.11
HOXB3-212ENST00000498678 MPLKIPQ8TAP9 179 aa15.71■□□□□ 0.11
HOXB3-212ENST00000498678 A0A1B0GW54 56 aa15.68■□□□□ 0.1
HOXB3-212ENST00000498678 FAM229BQ4G0N7 80 aa15.67■□□□□ 0.1
HOXB3-212ENST00000498678 ANAPC11Q9NYG5 84 aa15.65■□□□□ 0.1
HOXB3-212ENST00000498678 DYNC1H1Q14204 4646 aaKnown RBP15.64■□□□□ 0.09
HOXB3-212ENST00000498678 TMEM254Q8TBM7 123 aa15.63■□□□□ 0.09
HOXB3-212ENST00000498678 IGLV9-49A0A0B4J1Y8 123 aa15.62■□□□□ 0.09
HOXB3-212ENST00000498678 Q1T7F1 81 aa15.61■□□□□ 0.09
HOXB3-212ENST00000498678 NREPQ16612 68 aa15.59■□□□□ 0.09
HOXB3-212ENST00000498678 RPL37AP61513 92 aaKnown RBP15.53■□□□□ 0.08
HOXB3-212ENST00000498678 RYR3Q15413 4870 aa15.52■□□□□ 0.07
HOXB3-212ENST00000498678 MOBPQ13875 183 aa15.52■□□□□ 0.07
HOXB3-212ENST00000498678 VPS13BQ7Z7G8 4022 aa15.52■□□□□ 0.07
HOXB3-212ENST00000498678 A0A087WSZ3 146 aa15.5■□□□□ 0.07
HOXB3-212ENST00000498678 SMR3BP02814 79 aaPredicted RBP15.49■□□□□ 0.07
HOXB3-212ENST00000498678 BPY2O14599 106 aa15.47■□□□□ 0.07
HOXB3-212ENST00000498678 hDV103S1A0JD37 113 aa15.46■□□□□ 0.07
HOXB3-212ENST00000498678 APOBP04114 4563 aaKnown RBP15.45■□□□□ 0.06
HOXB3-212ENST00000498678 KRTAP1-4P0C5Y4 121 aa15.39■□□□□ 0.05
HOXB3-212ENST00000498678 A0A087X002 238 aa15.38■□□□□ 0.05
HOXB3-212ENST00000498678 OCR1Q9BZK8 76 aa15.38■□□□□ 0.05
HOXB3-212ENST00000498678 SPINK6Q6UWN8 80 aa15.36■□□□□ 0.05
HOXB3-212ENST00000498678 SSBP3-AS1Q7Z2R9 100 aa15.35■□□□□ 0.05
HOXB3-212ENST00000498678 KRTAP13-2Q52LG2 175 aa15.34■□□□□ 0.05
HOXB3-212ENST00000498678 Q8N9L7 120 aa15.34■□□□□ 0.05
HOXB3-212ENST00000498678 KRTAP10-4P60372 401 aaPredicted RBP15.34■□□□□ 0.05
HOXB3-212ENST00000498678 KTN1-AS1Q86SY8 53 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms