RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 LINC00336Q6ZUF6 198 aa5□□□□□ -1.61
PDZRN3-212ENST00000498048 C3orf22Q8N5N4 141 aa5□□□□□ -1.61
PDZRN3-212ENST00000498048 MT-ATP8P03928 68 aa4.99□□□□□ -1.61
PDZRN3-212ENST00000498048 KRTAP13-1Q8IUC0 172 aa4.99□□□□□ -1.61
PDZRN3-212ENST00000498048 SIGMAR1Q99720 223 aa4.99□□□□□ -1.61
PDZRN3-212ENST00000498048 PSORS1C2Q9UIG4 136 aa4.99□□□□□ -1.61
PDZRN3-212ENST00000498048 KRTAP10-1P60331 282 aa4.98□□□□□ -1.61
PDZRN3-212ENST00000498048 C1orf137Q5JT78 98 aa4.98□□□□□ -1.61
PDZRN3-212ENST00000498048 Q6ZSA8 131 aa4.98□□□□□ -1.61
PDZRN3-212ENST00000498048 SCXQ7RTU7 201 aa4.98□□□□□ -1.61
PDZRN3-212ENST00000498048 LINC00846Q9NV44 126 aa4.97□□□□□ -1.61
PDZRN3-212ENST00000498048 FAM30AQ9NZY2 134 aa4.97□□□□□ -1.61
PDZRN3-212ENST00000498048 HAMPP81172 84 aa4.96□□□□□ -1.62
PDZRN3-212ENST00000498048 LINC00643Q86TS7 51 aa4.96□□□□□ -1.62
PDZRN3-212ENST00000498048 CIRBP-AS1Q8TBR5 109 aa4.96□□□□□ -1.62
PDZRN3-212ENST00000498048 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.62
PDZRN3-212ENST00000498048 ZNF706Q9Y5V0 76 aaPredicted RBP4.96□□□□□ -1.62
PDZRN3-212ENST00000498048 SPRR1BP22528 89 aa4.95□□□□□ -1.62
PDZRN3-212ENST00000498048 Q6JHZ5 121 aa4.95□□□□□ -1.62
PDZRN3-212ENST00000498048 UBL5Q9BZL1 73 aa4.95□□□□□ -1.62
PDZRN3-212ENST00000498048 RYR2Q92736 4967 aa4.94□□□□□ -1.62
PDZRN3-212ENST00000498048 ATP5EP2Q5VTU8 51 aa4.94□□□□□ -1.62
PDZRN3-212ENST00000498048 SMIM29Q86T20 159 aa4.94□□□□□ -1.62
PDZRN3-212ENST00000498048 TRBV7-7A0A0K0K1E9 115 aa4.93□□□□□ -1.62
PDZRN3-212ENST00000498048 ZNF861PO60384 105 aa4.93□□□□□ -1.62
PDZRN3-212ENST00000498048 IGLV7-43P04211 117 aa4.93□□□□□ -1.62
PDZRN3-212ENST00000498048 Q8NBF4 154 aa4.93□□□□□ -1.62
PDZRN3-212ENST00000498048 SPRR4Q96PI1 79 aa4.93□□□□□ -1.62
PDZRN3-212ENST00000498048 A0A1B0GVY2 172 aa4.92□□□□□ -1.62
PDZRN3-212ENST00000498048 SCGB1A1P11684 91 aa4.92□□□□□ -1.62
PDZRN3-212ENST00000498048 Q6ZVQ6 151 aa4.92□□□□□ -1.62
PDZRN3-212ENST00000498048 IGLV8-61A0A075B6I0 122 aa4.91□□□□□ -1.62
PDZRN3-212ENST00000498048 IGKV3D-7A0A0C4DH55 119 aa4.91□□□□□ -1.62
PDZRN3-212ENST00000498048 A0A1W2PNM2 257 aa4.91□□□□□ -1.62
PDZRN3-212ENST00000498048 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
PDZRN3-212ENST00000498048 C9orf153Q5TBE3 101 aa4.91□□□□□ -1.62
PDZRN3-212ENST00000498048 Q6Q795 121 aa4.91□□□□□ -1.62
PDZRN3-212ENST00000498048 IGFL1Q6UW32 110 aa4.91□□□□□ -1.62
PDZRN3-212ENST00000498048 LINC00483Q53H64 154 aa4.9□□□□□ -1.63
PDZRN3-212ENST00000498048 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.63
PDZRN3-212ENST00000498048 PKHD1P08F94 4074 aa4.89□□□□□ -1.63
PDZRN3-212ENST00000498048 IGLV9-49A0A0B4J1Y8 123 aa4.89□□□□□ -1.63
PDZRN3-212ENST00000498048 A0A1B0GW54 56 aa4.88□□□□□ -1.63
PDZRN3-212ENST00000498048 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
PDZRN3-212ENST00000498048 IMUPQ9GZP8 106 aa4.88□□□□□ -1.63
PDZRN3-212ENST00000498048 A0A0G2JQZ4 141 aa4.87□□□□□ -1.63
PDZRN3-212ENST00000498048 MOBPQ13875 183 aa4.87□□□□□ -1.63
PDZRN3-212ENST00000498048 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
PDZRN3-212ENST00000498048 FAM236AA0A1B0GUQ0 79 aa4.86□□□□□ -1.63
PDZRN3-212ENST00000498048 FAM236BA0A1B0GV22 79 aa4.86□□□□□ -1.63
PDZRN3-212ENST00000498048 CRYGAP11844 174 aa4.86□□□□□ -1.63
PDZRN3-212ENST00000498048 PCP4P48539 62 aa4.86□□□□□ -1.63
PDZRN3-212ENST00000498048 RPL37AP61513 92 aaKnown RBP4.86□□□□□ -1.63
PDZRN3-212ENST00000498048 HIST1H4AP62805 103 aaKnown RBP4.86□□□□□ -1.63
PDZRN3-212ENST00000498048 CXCL6P80162 114 aa4.86□□□□□ -1.63
PDZRN3-212ENST00000498048 NREPQ16612 68 aa4.86□□□□□ -1.63
PDZRN3-212ENST00000498048 LRP1BQ9NZR2 4599 aa4.86□□□□□ -1.63
PDZRN3-212ENST00000498048 DYNC1H1Q14204 4646 aaKnown RBP4.85□□□□□ -1.63
PDZRN3-212ENST00000498048 A0A087WSZ3 146 aa4.85□□□□□ -1.63
PDZRN3-212ENST00000498048 KMT2CQ8NEZ4 4911 aaKnown RBP4.85□□□□□ -1.63
PDZRN3-212ENST00000498048 A0A087WVE0 104 aa4.84□□□□□ -1.63
PDZRN3-212ENST00000498048 KRTAP9-6A0A140TA67 174 aa4.84□□□□□ -1.63
PDZRN3-212ENST00000498048 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
PDZRN3-212ENST00000498048 SRRM2Q9UQ35 2752 aaKnown RBP4.84□□□□□ -1.63
PDZRN3-212ENST00000498048 BPY2O14599 106 aa4.83□□□□□ -1.64
PDZRN3-212ENST00000498048 ANAPC11Q9NYG5 84 aa4.83□□□□□ -1.64
PDZRN3-212ENST00000498048 APOBP04114 4563 aaKnown RBP4.83□□□□□ -1.64
PDZRN3-212ENST00000498048 ANAPC13Q9BS18 74 aa4.82□□□□□ -1.64
PDZRN3-212ENST00000498048 FAM229BQ4G0N7 80 aa4.81□□□□□ -1.64
PDZRN3-212ENST00000498048 ATOX1O00244 68 aa4.8□□□□□ -1.64
PDZRN3-212ENST00000498048 IGKV4-1P06312 121 aa4.8□□□□□ -1.64
PDZRN3-212ENST00000498048 HRCT1Q6UXD1 115 aa4.8□□□□□ -1.64
PDZRN3-212ENST00000498048 SS18L2Q9UHA2 77 aa4.8□□□□□ -1.64
PDZRN3-212ENST00000498048 SMR3BP02814 79 aaPredicted RBP4.79□□□□□ -1.64
PDZRN3-212ENST00000498048 Q8N9L7 120 aa4.79□□□□□ -1.64
PDZRN3-212ENST00000498048 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
PDZRN3-212ENST00000498048 PKHD1L1Q86WI1 4243 aa4.79□□□□□ -1.64
PDZRN3-212ENST00000498048 A0A087X002 238 aa4.78□□□□□ -1.64
PDZRN3-212ENST00000498048 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
PDZRN3-212ENST00000498048 SPINK6Q6UWN8 80 aa4.78□□□□□ -1.64
PDZRN3-212ENST00000498048 KRTAP1-4P0C5Y4 121 aa4.77□□□□□ -1.65
PDZRN3-212ENST00000498048 K7EQZ3 153 aa4.76□□□□□ -1.65
PDZRN3-212ENST00000498048 DSCR10P59022 87 aa4.76□□□□□ -1.65
PDZRN3-212ENST00000498048 KRTAP13-2Q52LG2 175 aa4.76□□□□□ -1.65
PDZRN3-212ENST00000498048 CD164Q04900 197 aa4.75□□□□□ -1.65
PDZRN3-212ENST00000498048 DEFB116Q30KQ4 102 aa4.75□□□□□ -1.65
PDZRN3-212ENST00000498048 SSBP3-AS1Q7Z2R9 100 aa4.75□□□□□ -1.65
PDZRN3-212ENST00000498048 RYR3Q15413 4870 aa4.75□□□□□ -1.65
PDZRN3-212ENST00000498048 J3KT08 172 aa4.74□□□□□ -1.65
PDZRN3-212ENST00000498048 LINC00472Q9H8W2 130 aa4.74□□□□□ -1.65
PDZRN3-212ENST00000498048 CDK2AP2O75956 126 aa4.73□□□□□ -1.65
PDZRN3-212ENST00000498048 KRTAP10-4P60372 401 aaPredicted RBP4.73□□□□□ -1.65
PDZRN3-212ENST00000498048 Q96NJ1 140 aa4.73□□□□□ -1.65
PDZRN3-212ENST00000498048 A8MWP4 228 aa4.72□□□□□ -1.65
PDZRN3-212ENST00000498048 HCG22E2RYF7 251 aa4.72□□□□□ -1.65
PDZRN3-212ENST00000498048 TYMSOSQ8TAI1 123 aa4.72□□□□□ -1.65
PDZRN3-212ENST00000498048 Q5VSD8 79 aa4.71□□□□□ -1.66
PDZRN3-212ENST00000498048 SERP2Q8N6R1 65 aa4.71□□□□□ -1.66
PDZRN3-212ENST00000498048 LIMD2Q9BT23 127 aa4.71□□□□□ -1.66
PDZRN3-212ENST00000498048 NDUFB1O75438 58 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms