RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 PDE6GP18545 87 aa7.45□□□□□ -1.22
SNRNP200-208ENST00000497539 LIMD2Q9BT23 127 aa7.45□□□□□ -1.22
SNRNP200-208ENST00000497539 ELOF1P60002 83 aaKnown RBP7.44□□□□□ -1.22
SNRNP200-208ENST00000497539 KRTAP1-5Q9BYS1 174 aa7.44□□□□□ -1.22
SNRNP200-208ENST00000497539 DEFB105AQ8NG35 78 aa7.44□□□□□ -1.22
SNRNP200-208ENST00000497539 C3orf84H3BNL1 204 aa7.43□□□□□ -1.22
SNRNP200-208ENST00000497539 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
SNRNP200-208ENST00000497539 CDC42SE1Q9NRR8 79 aa7.42□□□□□ -1.22
SNRNP200-208ENST00000497539 HIGD2AQ9BW72 106 aa7.42□□□□□ -1.22
SNRNP200-208ENST00000497539 KCNQ1DNQ9H478 68 aa7.42□□□□□ -1.22
SNRNP200-208ENST00000497539 LCE6AA0A183 80 aa7.41□□□□□ -1.22
SNRNP200-208ENST00000497539 MP68P56378 58 aa7.41□□□□□ -1.22
SNRNP200-208ENST00000497539 UBE2DNLQ8IWF7 75 aa7.41□□□□□ -1.22
SNRNP200-208ENST00000497539 MGAM2Q2M2H8 2515 aa7.41□□□□□ -1.22
SNRNP200-208ENST00000497539 Q75L30 129 aa7.41□□□□□ -1.22
SNRNP200-208ENST00000497539 C14orf177Q52M58 125 aa7.4□□□□□ -1.23
SNRNP200-208ENST00000497539 LINC00528Q8N1L1 170 aa7.39□□□□□ -1.23
SNRNP200-208ENST00000497539 IGKV4-1P06312 121 aa7.38□□□□□ -1.23
SNRNP200-208ENST00000497539 C7orf33Q8WU49 177 aa7.38□□□□□ -1.23
SNRNP200-208ENST00000497539 Q8N9P0 234 aaPredicted RBP7.38□□□□□ -1.23
SNRNP200-208ENST00000497539 ZCCHC13Q8WW36 166 aaKnown RBP7.37□□□□□ -1.23
SNRNP200-208ENST00000497539 NBDYA0A0U1RRE5 68 aa7.37□□□□□ -1.23
SNRNP200-208ENST00000497539 SPRR1AP35321 89 aa7.37□□□□□ -1.23
SNRNP200-208ENST00000497539 MOBPQ13875 183 aa7.37□□□□□ -1.23
SNRNP200-208ENST00000497539 LOC101927531A0A1B0GV80 90 aa7.36□□□□□ -1.23
SNRNP200-208ENST00000497539 KRTAP7-1Q8IUC3 87 aa7.36□□□□□ -1.23
SNRNP200-208ENST00000497539 COL7A1Q02388 2944 aa7.35□□□□□ -1.23
SNRNP200-208ENST00000497539 IGLV1-50A0A075B6I6 118 aa7.35□□□□□ -1.23
SNRNP200-208ENST00000497539 KRTAP4-16G5E9R7 235 aaPredicted RBP7.35□□□□□ -1.23
SNRNP200-208ENST00000497539 Q6ZRN7 208 aaPredicted RBP7.35□□□□□ -1.23
SNRNP200-208ENST00000497539 H0Y9J4 135 aa7.34□□□□□ -1.23
SNRNP200-208ENST00000497539 FAM30AQ9NZY2 134 aa7.34□□□□□ -1.24
SNRNP200-208ENST00000497539 RPL37AP8A6NKH3 93 aa7.33□□□□□ -1.24
SNRNP200-208ENST00000497539 Q8N377 158 aa7.33□□□□□ -1.24
SNRNP200-208ENST00000497539 DNAH7Q8WXX0 4024 aa7.33□□□□□ -1.24
SNRNP200-208ENST00000497539 STAB2Q8WWQ8 2551 aa7.32□□□□□ -1.24
SNRNP200-208ENST00000497539 A6NED7 52 aa7.32□□□□□ -1.24
SNRNP200-208ENST00000497539 FAM168BA1KXE4 195 aa7.32□□□□□ -1.24
SNRNP200-208ENST00000497539 PRR15LQ9BU68 103 aa7.31□□□□□ -1.24
SNRNP200-208ENST00000497539 DHRS4-AS1Q9P1J3 65 aa7.31□□□□□ -1.24
SNRNP200-208ENST00000497539 Q6ZRX8 168 aa7.31□□□□□ -1.24
SNRNP200-208ENST00000497539 SMIM29Q86T20 159 aa7.31□□□□□ -1.24
SNRNP200-208ENST00000497539 ASB16-AS1Q495Z4 193 aa7.3□□□□□ -1.24
SNRNP200-208ENST00000497539 ST20-AS1Q8NBB2 130 aa7.3□□□□□ -1.24
SNRNP200-208ENST00000497539 A0A096LNI7 61 aa7.29□□□□□ -1.24
SNRNP200-208ENST00000497539 PLA2G1BP04054 148 aaKnown RBP7.29□□□□□ -1.24
SNRNP200-208ENST00000497539 C9orf163Q8N9P6 203 aa7.29□□□□□ -1.24
SNRNP200-208ENST00000497539 A0A087X002 238 aa7.28□□□□□ -1.24
SNRNP200-208ENST00000497539 A0A1W2PNM2 257 aa7.28□□□□□ -1.24
SNRNP200-208ENST00000497539 VPS13DQ5THJ4 4388 aa7.28□□□□□ -1.24
SNRNP200-208ENST00000497539 A0A0A0MQY5 61 aa7.28□□□□□ -1.24
SNRNP200-208ENST00000497539 FBN3Q75N90 2809 aa7.28□□□□□ -1.24
SNRNP200-208ENST00000497539 A0A0G2JQZ4 141 aa7.27□□□□□ -1.25
SNRNP200-208ENST00000497539 A0A1W2PNN7 141 aa7.27□□□□□ -1.25
SNRNP200-208ENST00000497539 Q6ZR54 194 aa7.27□□□□□ -1.25
SNRNP200-208ENST00000497539 Q9BRP9 147 aa7.26□□□□□ -1.25
SNRNP200-208ENST00000497539 PLECQ15149 4684 aaKnown RBP7.26□□□□□ -1.25
SNRNP200-208ENST00000497539 IGLV5-48A0A075B6I7 105 aa7.26□□□□□ -1.25
SNRNP200-208ENST00000497539 CSMD3Q7Z407 3707 aa7.26□□□□□ -1.25
SNRNP200-208ENST00000497539 REG3GQ6UW15 175 aa7.25□□□□□ -1.25
SNRNP200-208ENST00000497539 PRAC1Q96KF2 57 aa7.25□□□□□ -1.25
SNRNP200-208ENST00000497539 PRKDCP78527 4128 aaKnown RBP7.25□□□□□ -1.25
SNRNP200-208ENST00000497539 ETDCA0A1B0GVM5 59 aa7.25□□□□□ -1.25
SNRNP200-208ENST00000497539 C1orf137Q5JT78 98 aa7.25□□□□□ -1.25
SNRNP200-208ENST00000497539 NDUFB1O75438 58 aa7.24□□□□□ -1.25
SNRNP200-208ENST00000497539 PRR4Q16378 134 aa7.24□□□□□ -1.25
SNRNP200-208ENST00000497539 DEFB116Q30KQ4 102 aa7.23□□□□□ -1.25
SNRNP200-208ENST00000497539 SRRM2Q9UQ35 2752 aaKnown RBP7.23□□□□□ -1.25
SNRNP200-208ENST00000497539 K7EQZ3 153 aa7.22□□□□□ -1.25
SNRNP200-208ENST00000497539 STARD9Q9P2P6 4700 aa7.22□□□□□ -1.25
SNRNP200-208ENST00000497539 DNAH6Q9C0G6 4158 aa7.21□□□□□ -1.25
SNRNP200-208ENST00000497539 A0A087WTM6 91 aa7.21□□□□□ -1.25
SNRNP200-208ENST00000497539 DSCR10P59022 87 aa7.21□□□□□ -1.25
SNRNP200-208ENST00000497539 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.21□□□□□ -1.26
SNRNP200-208ENST00000497539 TNP2Q05952 138 aa7.21□□□□□ -1.26
SNRNP200-208ENST00000497539 ZNF706Q9Y5V0 76 aaPredicted RBP7.21□□□□□ -1.26
SNRNP200-208ENST00000497539 MEGF8Q7Z7M0 2845 aa7.21□□□□□ -1.26
SNRNP200-208ENST00000497539 A0A1B0GW54 56 aa7.2□□□□□ -1.26
SNRNP200-208ENST00000497539 DNAH10Q8IVF4 4471 aa7.19□□□□□ -1.26
SNRNP200-208ENST00000497539 IGKV2-24A0A0C4DH68 120 aa7.19□□□□□ -1.26
SNRNP200-208ENST00000497539 CASC2Q6XLA1 102 aa7.19□□□□□ -1.26
SNRNP200-208ENST00000497539 Q8NBF4 154 aa7.19□□□□□ -1.26
SNRNP200-208ENST00000497539 LINC00208Q96KT6 92 aa7.19□□□□□ -1.26
SNRNP200-208ENST00000497539 LYSTQ99698 3801 aa7.19□□□□□ -1.26
SNRNP200-208ENST00000497539 SPANXA2-OT1Q8N9U9 137 aa7.18□□□□□ -1.26
SNRNP200-208ENST00000497539 SPACA4Q8TDM5 124 aa7.18□□□□□ -1.26
SNRNP200-208ENST00000497539 PLAC8Q9NZF1 115 aa7.18□□□□□ -1.26
SNRNP200-208ENST00000497539 IGHV6-1A0A0B4J1U7 121 aa7.16□□□□□ -1.26
SNRNP200-208ENST00000497539 CHTF8P0CG12 524 aa7.16□□□□□ -1.26
SNRNP200-208ENST00000497539 WFDC13Q8IUB5 93 aa7.15□□□□□ -1.26
SNRNP200-208ENST00000497539 LINC00476Q8WZB0 136 aa7.15□□□□□ -1.26
SNRNP200-208ENST00000497539 SPRR1BP22528 89 aa7.14□□□□□ -1.27
SNRNP200-208ENST00000497539 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
SNRNP200-208ENST00000497539 ADM2Q7Z4H4 148 aa7.14□□□□□ -1.27
SNRNP200-208ENST00000497539 KRTAP11-1Q8IUC1 163 aa7.14□□□□□ -1.27
SNRNP200-208ENST00000497539 WWC2-AS2Q96NR7 200 aa7.14□□□□□ -1.27
SNRNP200-208ENST00000497539 SPRR4Q96PI1 79 aa7.14□□□□□ -1.27
SNRNP200-208ENST00000497539 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
SNRNP200-208ENST00000497539 LINC01558Q9Y6Z2 57 aa7.14□□□□□ -1.27
SNRNP200-208ENST00000497539 ALMS1Q8TCU4 4167 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms