RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 PTPN23Q9H3S7 1636 aa-0.52□□□□□ -2.49
PHC3-216ENST00000497171 RPS29P62273 56 aaKnown RBP-0.52□□□□□ -2.49
PHC3-216ENST00000497171 DEFB110Q30KQ9 67 aa-0.52□□□□□ -2.49
PHC3-216ENST00000497171 DPY30Q9C005 99 aa-0.52□□□□□ -2.49
PHC3-216ENST00000497171 TRRAPQ9Y4A5 3859 aa-0.52□□□□□ -2.49
PHC3-216ENST00000497171 DNAH5Q8TE73 4624 aa-0.52□□□□□ -2.49
PHC3-216ENST00000497171 NRXN1Q9ULB1 1477 aa-0.53□□□□□ -2.49
PHC3-216ENST00000497171 MYO15AQ9UKN7 3530 aa-0.53□□□□□ -2.49
PHC3-216ENST00000497171 DNAH8Q96JB1 4490 aa-0.53□□□□□ -2.49
PHC3-216ENST00000497171 MMP24-AS1A0A0U1RRL7 71 aa-0.53□□□□□ -2.49
PHC3-216ENST00000497171 F8WEM9 126 aa-0.53□□□□□ -2.49
PHC3-216ENST00000497171 SMR3BP02814 79 aaPredicted RBP-0.53□□□□□ -2.49
PHC3-216ENST00000497171 MT1FP04733 61 aa-0.53□□□□□ -2.49
PHC3-216ENST00000497171 TNP1P09430 55 aa-0.53□□□□□ -2.49
PHC3-216ENST00000497171 S4R3F8 94 aa-0.53□□□□□ -2.49
PHC3-216ENST00000497171 DNAH17Q9UFH2 4485 aa-0.53□□□□□ -2.49
PHC3-216ENST00000497171 PEG3Q9GZU2 1588 aa-0.53□□□□□ -2.49
PHC3-216ENST00000497171 KIAA1551Q9HCM1 1747 aa-0.54□□□□□ -2.5
PHC3-216ENST00000497171 C3orf79P0CE67 100 aa-0.54□□□□□ -2.5
PHC3-216ENST00000497171 PRLHP81277 87 aa-0.54□□□□□ -2.5
PHC3-216ENST00000497171 KRTAP19-6Q3LI70 58 aa-0.54□□□□□ -2.5
PHC3-216ENST00000497171 KRTAP19-5Q3LI72 72 aa-0.54□□□□□ -2.5
PHC3-216ENST00000497171 NCMAPQ5T1S8 102 aa-0.54□□□□□ -2.5
PHC3-216ENST00000497171 ACBD7Q8N6N7 88 aa-0.54□□□□□ -2.5
PHC3-216ENST00000497171 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.54□□□□□ -2.5
PHC3-216ENST00000497171 ADAMTS12P58397 1594 aa-0.54□□□□□ -2.5
PHC3-216ENST00000497171 SPTBN5Q9NRC6 3674 aaKnown RBP-0.54□□□□□ -2.5
PHC3-216ENST00000497171 KIF20BQ96Q89 1820 aa-0.54□□□□□ -2.5
PHC3-216ENST00000497171 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.55□□□□□ -2.5
PHC3-216ENST00000497171 IGLC2P0DOY2 106 aa-0.55□□□□□ -2.5
PHC3-216ENST00000497171 IGLC3P0DOY3 106 aa-0.55□□□□□ -2.5
PHC3-216ENST00000497171 HMGA1P17096 107 aaKnown RBP-0.55□□□□□ -2.5
PHC3-216ENST00000497171 RPL38P63173 70 aaKnown RBP-0.55□□□□□ -2.5
PHC3-216ENST00000497171 HMGN3Q15651 99 aa-0.55□□□□□ -2.5
PHC3-216ENST00000497171 ALKAL2Q6UX46 152 aa-0.55□□□□□ -2.5
PHC3-216ENST00000497171 SAMD9Q5K651 1589 aa-0.55□□□□□ -2.5
PHC3-216ENST00000497171 SPEGQ15772 3267 aa-0.55□□□□□ -2.5
PHC3-216ENST00000497171 TEX14Q8IWB6 1497 aa-0.55□□□□□ -2.5
PHC3-216ENST00000497171 CEP350Q5VT06 3117 aa-0.55□□□□□ -2.5
PHC3-216ENST00000497171 LELP1Q5T871 98 aa-0.56□□□□□ -2.5
PHC3-216ENST00000497171 KRTAP8-1Q8IUC2 63 aa-0.56□□□□□ -2.5
PHC3-216ENST00000497171 UBE2D4Q9Y2X8 147 aa-0.56□□□□□ -2.5
PHC3-216ENST00000497171 CLTCQ00610 1675 aaKnown RBP-0.56□□□□□ -2.5
PHC3-216ENST00000497171 NOP10Q9NPE3 64 aaKnown RBP-0.57□□□□□ -2.5
PHC3-216ENST00000497171 CICQ96RK0 1608 aaPredicted RBP-0.57□□□□□ -2.5
PHC3-216ENST00000497171 MAP3K1Q13233 1512 aa-0.58□□□□□ -2.5
PHC3-216ENST00000497171 CRYBG3Q68DQ2 2970 aa-0.58□□□□□ -2.5
PHC3-216ENST00000497171 LINC01546A6NGU7 62 aa-0.58□□□□□ -2.5
PHC3-216ENST00000497171 M0R143 59 aa-0.58□□□□□ -2.5
PHC3-216ENST00000497171 WFDC13Q8IUB5 93 aa-0.58□□□□□ -2.5
PHC3-216ENST00000497171 CRYBG1Q9Y4K1 1723 aa-0.58□□□□□ -2.5
PHC3-216ENST00000497171 BCORQ6W2J9 1755 aa-0.59□□□□□ -2.5
PHC3-216ENST00000497171 H3BUA1 57 aa-0.59□□□□□ -2.5
PHC3-216ENST00000497171 M0QZ58 72 aa-0.59□□□□□ -2.5
PHC3-216ENST00000497171 DEFB136Q30KP8 78 aa-0.59□□□□□ -2.5
PHC3-216ENST00000497171 BVES-AS1Q5T3Y7 98 aa-0.59□□□□□ -2.5
PHC3-216ENST00000497171 MGAQ8IWI9 3026 aa-0.59□□□□□ -2.5
PHC3-216ENST00000497171 CDC42BPGQ6DT37 1551 aa-0.59□□□□□ -2.5
PHC3-216ENST00000497171 DNAH10Q8IVF4 4471 aa-0.59□□□□□ -2.5
PHC3-216ENST00000497171 WDFY3Q8IZQ1 3526 aa-0.6□□□□□ -2.5
PHC3-216ENST00000497171 A8MTW9 85 aa-0.6□□□□□ -2.51
PHC3-216ENST00000497171 SPART-AS1P0CW21 52 aa-0.6□□□□□ -2.51
PHC3-216ENST00000497171 CEP250Q9BV73 2442 aa-0.6□□□□□ -2.51
PHC3-216ENST00000497171 PKD1L3Q7Z443 1732 aa-0.61□□□□□ -2.51
PHC3-216ENST00000497171 FRYLO94915 3013 aa-0.61□□□□□ -2.51
PHC3-216ENST00000497171 LOC400499M0QZD8 3231 aa-0.61□□□□□ -2.51
PHC3-216ENST00000497171 DMDP11532 3685 aa-0.61□□□□□ -2.51
PHC3-216ENST00000497171 UBR3Q6ZT12 1888 aa-0.62□□□□□ -2.51
PHC3-216ENST00000497171 DEFB4AO15263 64 aa-0.62□□□□□ -2.51
PHC3-216ENST00000497171 ACYP1P07311 99 aa-0.62□□□□□ -2.51
PHC3-216ENST00000497171 PRO3102Q9H379 93 aa-0.62□□□□□ -2.51
PHC3-216ENST00000497171 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.62□□□□□ -2.51
PHC3-216ENST00000497171 RGPD2P0DJD1 1756 aa-0.62□□□□□ -2.51
PHC3-216ENST00000497171 MYH4Q9Y623 1939 aa-0.63□□□□□ -2.51
PHC3-216ENST00000497171 IGLV5-48A0A075B6I7 105 aa-0.63□□□□□ -2.51
PHC3-216ENST00000497171 LYNX1G3V0Z9 82 aa-0.63□□□□□ -2.51
PHC3-216ENST00000497171 IFI6P09912 130 aa-0.63□□□□□ -2.51
PHC3-216ENST00000497171 SMIM11AP58511 58 aa-0.63□□□□□ -2.51
PHC3-216ENST00000497171 EP400Q96L91 3159 aa-0.63□□□□□ -2.51
PHC3-216ENST00000497171 MAGI2Q86UL8 1455 aa-0.64□□□□□ -2.51
PHC3-216ENST00000497171 MRPL33O75394 65 aaKnown RBP-0.64□□□□□ -2.51
PHC3-216ENST00000497171 COX7BP24311 80 aa-0.64□□□□□ -2.51
PHC3-216ENST00000497171 LINC00158P58513 81 aa-0.64□□□□□ -2.51
PHC3-216ENST00000497171 EPRSP07814 1512 aaKnown RBP-0.64□□□□□ -2.51
PHC3-216ENST00000497171 PCNTO95613 3336 aa-0.65□□□□□ -2.51
PHC3-216ENST00000497171 LCE6AA0A183 80 aa-0.65□□□□□ -2.51
PHC3-216ENST00000497171 PEA15Q15121 130 aa-0.65□□□□□ -2.51
PHC3-216ENST00000497171 CDC42BPAQ5VT25 1732 aa-0.65□□□□□ -2.51
PHC3-216ENST00000497171 VPS13CQ709C8 3753 aa-0.65□□□□□ -2.51
PHC3-216ENST00000497171 MAGI3Q5TCQ9 1506 aa-0.65□□□□□ -2.51
PHC3-216ENST00000497171 MKI67P46013 3256 aaKnown RBP-0.65□□□□□ -2.51
PHC3-216ENST00000497171 FANCAO15360 1455 aa-0.66□□□□□ -2.51
PHC3-216ENST00000497171 ATP10BO94823 1461 aa-0.66□□□□□ -2.51
PHC3-216ENST00000497171 WDFY4Q6ZS81 3184 aa-0.66□□□□□ -2.51
PHC3-216ENST00000497171 SZT2Q5T011 3432 aa-0.66□□□□□ -2.51
PHC3-216ENST00000497171 ALKQ9UM73 1620 aa-0.66□□□□□ -2.51
PHC3-216ENST00000497171 MUC3AQ02505 3323 aa-0.66□□□□□ -2.52
PHC3-216ENST00000497171 M0QY20 66 aa-0.66□□□□□ -2.52
PHC3-216ENST00000497171 NDUFB1O75438 58 aa-0.66□□□□□ -2.52
PHC3-216ENST00000497171 DEFB106AQ8N104 65 aa-0.66□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms