RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 C1orf137Q5JT78 98 aa5.9□□□□□ -1.46
HPS4-217ENST00000496385 PRR34Q9NV39 138 aa5.9□□□□□ -1.46
HPS4-217ENST00000496385 DEFB130BP0DP73 79 aa5.9□□□□□ -1.47
HPS4-217ENST00000496385 DEFB130AP0DP74 79 aa5.9□□□□□ -1.47
HPS4-217ENST00000496385 DNAH3Q8TD57 4116 aa5.89□□□□□ -1.47
HPS4-217ENST00000496385 K7EIL1 84 aa5.89□□□□□ -1.47
HPS4-217ENST00000496385 C19orf73Q9NVV2 129 aa5.89□□□□□ -1.47
HPS4-217ENST00000496385 COL7A1Q02388 2944 aa5.88□□□□□ -1.47
HPS4-217ENST00000496385 PRKDCP78527 4128 aaKnown RBP5.87□□□□□ -1.47
HPS4-217ENST00000496385 C8orf87E5RJ46 101 aa5.87□□□□□ -1.47
HPS4-217ENST00000496385 C11orf45Q8TAV5 145 aa5.87□□□□□ -1.47
HPS4-217ENST00000496385 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
HPS4-217ENST00000496385 C9orf163Q8N9P6 203 aa5.86□□□□□ -1.47
HPS4-217ENST00000496385 LELP1Q5T871 98 aa5.86□□□□□ -1.47
HPS4-217ENST00000496385 IGKV2D-24A0A075B6R9 120 aa5.85□□□□□ -1.47
HPS4-217ENST00000496385 DEFB105AQ8NG35 78 aa5.85□□□□□ -1.47
HPS4-217ENST00000496385 CAMK2N2Q96S95 79 aa5.85□□□□□ -1.47
HPS4-217ENST00000496385 A0A096LPF7 62 aa5.85□□□□□ -1.47
HPS4-217ENST00000496385 MOBPQ13875 183 aa5.85□□□□□ -1.47
HPS4-217ENST00000496385 NKAPP1Q8N9T2 125 aa5.85□□□□□ -1.47
HPS4-217ENST00000496385 PLAC8Q9NZF1 115 aa5.85□□□□□ -1.47
HPS4-217ENST00000496385 TENM3Q9P273 2699 aa5.84□□□□□ -1.47
HPS4-217ENST00000496385 IGLV7-46A0A075B6I9 117 aa5.84□□□□□ -1.47
HPS4-217ENST00000496385 H0Y9P7 68 aa5.84□□□□□ -1.47
HPS4-217ENST00000496385 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.48
HPS4-217ENST00000496385 COA5Q86WW8 74 aa5.84□□□□□ -1.48
HPS4-217ENST00000496385 Q6ZRX8 168 aa5.83□□□□□ -1.48
HPS4-217ENST00000496385 ASB16-AS1Q495Z4 193 aa5.83□□□□□ -1.48
HPS4-217ENST00000496385 A0A087X002 238 aa5.82□□□□□ -1.48
HPS4-217ENST00000496385 CNBPP62633 177 aaKnown RBP5.82□□□□□ -1.48
HPS4-217ENST00000496385 PLA2G2DQ9UNK4 145 aa5.81□□□□□ -1.48
HPS4-217ENST00000496385 X6R8D5 127 aa5.8□□□□□ -1.48
HPS4-217ENST00000496385 SPRR1AP35321 89 aa5.8□□□□□ -1.48
HPS4-217ENST00000496385 WFDC13Q8IUB5 93 aa5.8□□□□□ -1.48
HPS4-217ENST00000496385 KRTAP4-16G5E9R7 235 aaPredicted RBP5.79□□□□□ -1.48
HPS4-217ENST00000496385 C7orf33Q8WU49 177 aa5.79□□□□□ -1.48
HPS4-217ENST00000496385 STAB2Q8WWQ8 2551 aa5.79□□□□□ -1.48
HPS4-217ENST00000496385 CASC2Q6XLA1 102 aa5.78□□□□□ -1.48
HPS4-217ENST00000496385 DEFB135Q30KP9 77 aa5.78□□□□□ -1.48
HPS4-217ENST00000496385 IGLV5-37A0A075B6J1 123 aa5.77□□□□□ -1.49
HPS4-217ENST00000496385 WFDC10BQ8IUB3 73 aa5.77□□□□□ -1.49
HPS4-217ENST00000496385 IGLV8-61A0A075B6I0 122 aa5.76□□□□□ -1.49
HPS4-217ENST00000496385 J3QL48 77 aa5.75□□□□□ -1.49
HPS4-217ENST00000496385 PLA2G1BP04054 148 aaKnown RBP5.75□□□□□ -1.49
HPS4-217ENST00000496385 KRTAP26-1Q6PEX3 210 aa5.75□□□□□ -1.49
HPS4-217ENST00000496385 LINC00476Q8WZB0 136 aa5.75□□□□□ -1.49
HPS4-217ENST00000496385 DNAH9Q9NYC9 4486 aa5.75□□□□□ -1.49
HPS4-217ENST00000496385 DEFB4AO15263 64 aa5.75□□□□□ -1.49
HPS4-217ENST00000496385 TLX1NBP0CAT3 122 aa5.75□□□□□ -1.49
HPS4-217ENST00000496385 IGLV1-50A0A075B6I6 118 aa5.74□□□□□ -1.49
HPS4-217ENST00000496385 LINC01554Q52M75 96 aa5.74□□□□□ -1.49
HPS4-217ENST00000496385 C15orf56Q8N910 161 aa5.74□□□□□ -1.49
HPS4-217ENST00000496385 DEFB116Q30KQ4 102 aa5.74□□□□□ -1.49
HPS4-217ENST00000496385 RPL37AP8A6NKH3 93 aa5.73□□□□□ -1.49
HPS4-217ENST00000496385 LINC00313P59037 77 aa5.73□□□□□ -1.49
HPS4-217ENST00000496385 HUWE1Q7Z6Z7 4374 aaKnown RBP5.73□□□□□ -1.49
HPS4-217ENST00000496385 A8MWP4 228 aa5.72□□□□□ -1.49
HPS4-217ENST00000496385 H3BS24 57 aa5.72□□□□□ -1.49
HPS4-217ENST00000496385 IGFL1Q6UW32 110 aa5.72□□□□□ -1.49
HPS4-217ENST00000496385 TP53AIP1Q9HCN2 124 aa5.72□□□□□ -1.49
HPS4-217ENST00000496385 SPINK7P58062 85 aa5.72□□□□□ -1.49
HPS4-217ENST00000496385 SPAG11AQ6PDA7 123 aa5.72□□□□□ -1.49
HPS4-217ENST00000496385 SERTAD4-AS1Q5TG53 156 aa5.72□□□□□ -1.49
HPS4-217ENST00000496385 A0A087WSZ3 146 aa5.7□□□□□ -1.5
HPS4-217ENST00000496385 Q8NAQ8 132 aa5.7□□□□□ -1.5
HPS4-217ENST00000496385 SPART-AS1P0CW21 52 aa5.68□□□□□ -1.5
HPS4-217ENST00000496385 DEFB131BA0A096LNP1 70 aa5.68□□□□□ -1.5
HPS4-217ENST00000496385 TENM2Q9NT68 2774 aa5.67□□□□□ -1.5
HPS4-217ENST00000496385 H3BNG1 76 aa5.67□□□□□ -1.5
HPS4-217ENST00000496385 Q6ZR54 194 aa5.67□□□□□ -1.5
HPS4-217ENST00000496385 LINC00472Q9H8W2 130 aa5.67□□□□□ -1.5
HPS4-217ENST00000496385 CSMD3Q7Z407 3707 aa5.67□□□□□ -1.5
HPS4-217ENST00000496385 RPL37AP61513 92 aaKnown RBP5.67□□□□□ -1.5
HPS4-217ENST00000496385 HRES1P13985 223 aa5.65□□□□□ -1.5
HPS4-217ENST00000496385 MMP24-AS1A0A0U1RRL7 71 aa5.65□□□□□ -1.51
HPS4-217ENST00000496385 REG3GQ6UW15 175 aa5.64□□□□□ -1.51
HPS4-217ENST00000496385 PCOTHQ58A44 107 aa5.63□□□□□ -1.51
HPS4-217ENST00000496385 PRAC1Q96KF2 57 aa5.63□□□□□ -1.51
HPS4-217ENST00000496385 RTL8CO15255 209 aa5.62□□□□□ -1.51
HPS4-217ENST00000496385 IGKV2-24A0A0C4DH68 120 aa5.62□□□□□ -1.51
HPS4-217ENST00000496385 HTN3P15516 51 aa5.62□□□□□ -1.51
HPS4-217ENST00000496385 WWC2-AS2Q96NR7 200 aa5.61□□□□□ -1.51
HPS4-217ENST00000496385 DNAH7Q8WXX0 4024 aa5.61□□□□□ -1.51
HPS4-217ENST00000496385 STARD9Q9P2P6 4700 aa5.61□□□□□ -1.51
HPS4-217ENST00000496385 SPRR1BP22528 89 aa5.61□□□□□ -1.51
HPS4-217ENST00000496385 LINC01556Q5JQF7 62 aa5.61□□□□□ -1.51
HPS4-217ENST00000496385 LYSTQ99698 3801 aa5.6□□□□□ -1.51
HPS4-217ENST00000496385 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
HPS4-217ENST00000496385 PRR26Q8N8Z3 221 aa5.6□□□□□ -1.51
HPS4-217ENST00000496385 FAM168BA1KXE4 195 aa5.59□□□□□ -1.52
HPS4-217ENST00000496385 KRTAP7-1Q8IUC3 87 aa5.59□□□□□ -1.52
HPS4-217ENST00000496385 A0A0G2JQZ4 141 aa5.58□□□□□ -1.52
HPS4-217ENST00000496385 A0A1W2PNN7 141 aa5.58□□□□□ -1.52
HPS4-217ENST00000496385 H0Y9J4 135 aa5.58□□□□□ -1.52
HPS4-217ENST00000496385 RETNLBQ9BQ08 111 aa5.58□□□□□ -1.52
HPS4-217ENST00000496385 ACYP2P14621 99 aa5.56□□□□□ -1.52
HPS4-217ENST00000496385 CASC10Q5T4H9 136 aa5.56□□□□□ -1.52
HPS4-217ENST00000496385 ADM2Q7Z4H4 148 aa5.56□□□□□ -1.52
HPS4-217ENST00000496385 C8orf17Q9NRJ1 99 aa5.54□□□□□ -1.52
HPS4-217ENST00000496385 PLECQ15149 4684 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms