RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 J3QL48 77 aa6.92□□□□□ -1.3
CMSS1-208ENST00000496116 UBE2AP49459 152 aa6.92□□□□□ -1.3
CMSS1-208ENST00000496116 KLKP1Q107X0 134 aa6.92□□□□□ -1.3
CMSS1-208ENST00000496116 IGFL1Q6UW32 110 aa6.92□□□□□ -1.3
CMSS1-208ENST00000496116 DPH3Q96FX2 82 aa6.92□□□□□ -1.3
CMSS1-208ENST00000496116 KRTAP11-1Q8IUC1 163 aa6.91□□□□□ -1.3
CMSS1-208ENST00000496116 SPRR1BP22528 89 aa6.89□□□□□ -1.31
CMSS1-208ENST00000496116 PLECQ15149 4684 aaKnown RBP6.89□□□□□ -1.31
CMSS1-208ENST00000496116 TENM2Q9NT68 2774 aa6.88□□□□□ -1.31
CMSS1-208ENST00000496116 H7BZZ5 65 aa6.88□□□□□ -1.31
CMSS1-208ENST00000496116 SNURFQ9Y675 71 aa6.88□□□□□ -1.31
CMSS1-208ENST00000496116 A0A087WTM6 91 aa6.87□□□□□ -1.31
CMSS1-208ENST00000496116 NDUFC1O43677 76 aa6.87□□□□□ -1.31
CMSS1-208ENST00000496116 DSCR10P59022 87 aa6.87□□□□□ -1.31
CMSS1-208ENST00000496116 SPACA4Q8TDM5 124 aa6.87□□□□□ -1.31
CMSS1-208ENST00000496116 OCR1Q9BZK8 76 aa6.87□□□□□ -1.31
CMSS1-208ENST00000496116 A0A087WSZ3 146 aa6.86□□□□□ -1.31
CMSS1-208ENST00000496116 A0A0G2JQZ4 141 aa6.86□□□□□ -1.31
CMSS1-208ENST00000496116 FAM236DA0A1B0GTK5 79 aa6.86□□□□□ -1.31
CMSS1-208ENST00000496116 PANO1I0J062 215 aa6.86□□□□□ -1.31
CMSS1-208ENST00000496116 FAM236CP0DP71 79 aa6.86□□□□□ -1.31
CMSS1-208ENST00000496116 TMEM254Q8TBM7 123 aa6.86□□□□□ -1.31
CMSS1-208ENST00000496116 K7EQZ3 153 aa6.85□□□□□ -1.31
CMSS1-208ENST00000496116 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.84□□□□□ -1.31
CMSS1-208ENST00000496116 FBN3Q75N90 2809 aa6.83□□□□□ -1.32
CMSS1-208ENST00000496116 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
CMSS1-208ENST00000496116 RTL8CO15255 209 aa6.82□□□□□ -1.32
CMSS1-208ENST00000496116 STARD9Q9P2P6 4700 aa6.82□□□□□ -1.32
CMSS1-208ENST00000496116 HCG22E2RYF7 251 aa6.82□□□□□ -1.32
CMSS1-208ENST00000496116 Q6ZR54 194 aa6.82□□□□□ -1.32
CMSS1-208ENST00000496116 FAM30AQ9NZY2 134 aa6.8□□□□□ -1.32
CMSS1-208ENST00000496116 A0A0U1RQV1 116 aa6.8□□□□□ -1.32
CMSS1-208ENST00000496116 DEFB116Q30KQ4 102 aa6.8□□□□□ -1.32
CMSS1-208ENST00000496116 OXTP01178 125 aa6.79□□□□□ -1.32
CMSS1-208ENST00000496116 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
CMSS1-208ENST00000496116 PRKDCP78527 4128 aaKnown RBP6.78□□□□□ -1.32
CMSS1-208ENST00000496116 ZNF706Q9Y5V0 76 aaPredicted RBP6.78□□□□□ -1.32
CMSS1-208ENST00000496116 SERP1Q9Y6X1 66 aa6.78□□□□□ -1.32
CMSS1-208ENST00000496116 VPS13DQ5THJ4 4388 aa6.78□□□□□ -1.32
CMSS1-208ENST00000496116 C1orf134Q5TEV5 83 aa6.77□□□□□ -1.33
CMSS1-208ENST00000496116 IGLV5-52A0A0A0MRZ9 124 aa6.77□□□□□ -1.33
CMSS1-208ENST00000496116 PLAC8Q9NZF1 115 aa6.76□□□□□ -1.33
CMSS1-208ENST00000496116 LCE6AA0A183 80 aa6.76□□□□□ -1.33
CMSS1-208ENST00000496116 RPL37AP61513 92 aaKnown RBP6.76□□□□□ -1.33
CMSS1-208ENST00000496116 LINC00483Q53H64 154 aa6.75□□□□□ -1.33
CMSS1-208ENST00000496116 C5orf47Q569G3 176 aa6.75□□□□□ -1.33
CMSS1-208ENST00000496116 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
CMSS1-208ENST00000496116 PSORS1C2Q9UIG4 136 aa6.75□□□□□ -1.33
CMSS1-208ENST00000496116 IGLV9-49A0A0B4J1Y8 123 aa6.74□□□□□ -1.33
CMSS1-208ENST00000496116 A8MWP4 228 aa6.74□□□□□ -1.33
CMSS1-208ENST00000496116 WFDC13Q8IUB5 93 aa6.74□□□□□ -1.33
CMSS1-208ENST00000496116 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
CMSS1-208ENST00000496116 LY6G6CO95867 125 aa6.73□□□□□ -1.33
CMSS1-208ENST00000496116 PRR15Q8IV56 129 aa6.73□□□□□ -1.33
CMSS1-208ENST00000496116 MEGF8Q7Z7M0 2845 aa6.72□□□□□ -1.33
CMSS1-208ENST00000496116 HECTD4Q9Y4D8 3996 aa6.72□□□□□ -1.33
CMSS1-208ENST00000496116 ZNF861PO60384 105 aa6.72□□□□□ -1.33
CMSS1-208ENST00000496116 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
CMSS1-208ENST00000496116 DNHD1Q96M86 4753 aa6.72□□□□□ -1.33
CMSS1-208ENST00000496116 CASC2Q6XLA1 102 aa6.71□□□□□ -1.34
CMSS1-208ENST00000496116 KRTAP29-1A8MX34 341 aaPredicted RBP6.7□□□□□ -1.34
CMSS1-208ENST00000496116 NDUFB1O75438 58 aa6.7□□□□□ -1.34
CMSS1-208ENST00000496116 Q5XG85 94 aa6.7□□□□□ -1.34
CMSS1-208ENST00000496116 WWC2-AS2Q96NR7 200 aa6.69□□□□□ -1.34
CMSS1-208ENST00000496116 MP68P56378 58 aa6.68□□□□□ -1.34
CMSS1-208ENST00000496116 ZCCHC13Q8WW36 166 aaKnown RBP6.68□□□□□ -1.34
CMSS1-208ENST00000496116 MOBPQ13875 183 aa6.67□□□□□ -1.34
CMSS1-208ENST00000496116 DNAH2Q9P225 4427 aa6.67□□□□□ -1.34
CMSS1-208ENST00000496116 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
CMSS1-208ENST00000496116 HRCT1Q6UXD1 115 aa6.66□□□□□ -1.34
CMSS1-208ENST00000496116 IGLV7-43P04211 117 aa6.65□□□□□ -1.34
CMSS1-208ENST00000496116 C4orf26Q17RF5 130 aa6.65□□□□□ -1.34
CMSS1-208ENST00000496116 Q96NJ1 140 aa6.65□□□□□ -1.35
CMSS1-208ENST00000496116 DNAH17Q9UFH2 4485 aa6.64□□□□□ -1.35
CMSS1-208ENST00000496116 MMP24-AS1A0A0U1RRL7 71 aa6.64□□□□□ -1.35
CMSS1-208ENST00000496116 H3BPC8 53 aa6.64□□□□□ -1.35
CMSS1-208ENST00000496116 hDV103S1A0JD37 113 aa6.63□□□□□ -1.35
CMSS1-208ENST00000496116 ANAPC11Q9NYG5 84 aa6.63□□□□□ -1.35
CMSS1-208ENST00000496116 TGP01266 2768 aa6.62□□□□□ -1.35
CMSS1-208ENST00000496116 H0Y9P7 68 aa6.62□□□□□ -1.35
CMSS1-208ENST00000496116 CDK2AP2O75956 126 aa6.61□□□□□ -1.35
CMSS1-208ENST00000496116 LINC00208Q96KT6 92 aa6.61□□□□□ -1.35
CMSS1-208ENST00000496116 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
CMSS1-208ENST00000496116 TRAV22A0A0B4J277 110 aa6.6□□□□□ -1.35
CMSS1-208ENST00000496116 KRTAP10-2P60368 255 aa6.6□□□□□ -1.35
CMSS1-208ENST00000496116 CIRBP-AS1Q8TBR5 109 aa6.6□□□□□ -1.35
CMSS1-208ENST00000496116 FRAS1Q86XX4 4008 aa6.6□□□□□ -1.35
CMSS1-208ENST00000496116 DNAH8Q96JB1 4490 aa6.59□□□□□ -1.35
CMSS1-208ENST00000496116 A0A1B0GVX0 72 aa6.58□□□□□ -1.36
CMSS1-208ENST00000496116 TP53AIP1Q9HCN2 124 aa6.58□□□□□ -1.36
CMSS1-208ENST00000496116 C8orf17Q9NRJ1 99 aa6.58□□□□□ -1.36
CMSS1-208ENST00000496116 ASB16-AS1Q495Z4 193 aa6.58□□□□□ -1.36
CMSS1-208ENST00000496116 IGHV6-1A0A0B4J1U7 121 aa6.57□□□□□ -1.36
CMSS1-208ENST00000496116 DNAH6Q9C0G6 4158 aa6.57□□□□□ -1.36
CMSS1-208ENST00000496116 CD164Q04900 197 aa6.56□□□□□ -1.36
CMSS1-208ENST00000496116 FAM229BQ4G0N7 80 aa6.56□□□□□ -1.36
CMSS1-208ENST00000496116 SSBP3-AS1Q7Z2R9 100 aa6.56□□□□□ -1.36
CMSS1-208ENST00000496116 CYP4F30PQ9H0H9 118 aa6.56□□□□□ -1.36
CMSS1-208ENST00000496116 C1orf64Q8NEQ6 169 aa6.56□□□□□ -1.36
CMSS1-208ENST00000496116 Q6ZSA8 131 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms