RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 CSMD3Q7Z407 3707 aa7.05□□□□□ -1.28
CHMP3-209ENST00000494623 F8WEM9 126 aa7.05□□□□□ -1.28
CHMP3-209ENST00000494623 KRTAP11-1Q8IUC1 163 aa7.05□□□□□ -1.28
CHMP3-209ENST00000494623 LINC00476Q8WZB0 136 aa7.05□□□□□ -1.28
CHMP3-209ENST00000494623 A0A1B0GW54 56 aa7.04□□□□□ -1.28
CHMP3-209ENST00000494623 A0A0U1RQV1 116 aa7.04□□□□□ -1.28
CHMP3-209ENST00000494623 SPRR4Q96PI1 79 aa7.04□□□□□ -1.28
CHMP3-209ENST00000494623 NBDYA0A0U1RRE5 68 aa7.03□□□□□ -1.28
CHMP3-209ENST00000494623 LRCOL1A6NCL2 159 aa7.02□□□□□ -1.29
CHMP3-209ENST00000494623 KLKP1Q107X0 134 aa7.02□□□□□ -1.29
CHMP3-209ENST00000494623 DYNC2H1Q8NCM8 4307 aaKnown RBP7.02□□□□□ -1.29
CHMP3-209ENST00000494623 H7BZZ5 65 aa7.01□□□□□ -1.29
CHMP3-209ENST00000494623 IGFL1Q6UW32 110 aa7.01□□□□□ -1.29
CHMP3-209ENST00000494623 C9orf163Q8N9P6 203 aa7.01□□□□□ -1.29
CHMP3-209ENST00000494623 EPM2AB3EWF7 344 aa7□□□□□ -1.29
CHMP3-209ENST00000494623 UBE2AP49459 152 aa7□□□□□ -1.29
CHMP3-209ENST00000494623 SRRM2Q9UQ35 2752 aaKnown RBP7□□□□□ -1.29
CHMP3-209ENST00000494623 NUPR2A6NF83 97 aa6.99□□□□□ -1.29
CHMP3-209ENST00000494623 DSCR10P59022 87 aa6.99□□□□□ -1.29
CHMP3-209ENST00000494623 DEFB116Q30KQ4 102 aa6.99□□□□□ -1.29
CHMP3-209ENST00000494623 PANO1I0J062 215 aa6.98□□□□□ -1.29
CHMP3-209ENST00000494623 TMEM254Q8TBM7 123 aa6.98□□□□□ -1.29
CHMP3-209ENST00000494623 OCR1Q9BZK8 76 aa6.98□□□□□ -1.29
CHMP3-209ENST00000494623 FAM30AQ9NZY2 134 aa6.98□□□□□ -1.29
CHMP3-209ENST00000494623 K7EQZ3 153 aa6.97□□□□□ -1.29
CHMP3-209ENST00000494623 Q6ZRN7 208 aaPredicted RBP6.97□□□□□ -1.29
CHMP3-209ENST00000494623 A0A087WSZ3 146 aa6.96□□□□□ -1.29
CHMP3-209ENST00000494623 BRK1Q8WUW1 75 aa6.95□□□□□ -1.3
CHMP3-209ENST00000494623 IGLV8-61A0A075B6I0 122 aa6.95□□□□□ -1.3
CHMP3-209ENST00000494623 LINC00474Q9P2X8 69 aa6.95□□□□□ -1.3
CHMP3-209ENST00000494623 STARD9Q9P2P6 4700 aa6.95□□□□□ -1.3
CHMP3-209ENST00000494623 H0Y9J4 135 aa6.94□□□□□ -1.3
CHMP3-209ENST00000494623 NDUFC1O43677 76 aa6.93□□□□□ -1.3
CHMP3-209ENST00000494623 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.92□□□□□ -1.3
CHMP3-209ENST00000494623 SPRR1BP22528 89 aa6.91□□□□□ -1.3
CHMP3-209ENST00000494623 RPL37AP61513 92 aaKnown RBP6.91□□□□□ -1.3
CHMP3-209ENST00000494623 A0A087WTM6 91 aa6.9□□□□□ -1.31
CHMP3-209ENST00000494623 HCG22E2RYF7 251 aa6.9□□□□□ -1.31
CHMP3-209ENST00000494623 SERP1Q9Y6X1 66 aa6.9□□□□□ -1.31
CHMP3-209ENST00000494623 FP248Q71RG6 208 aaPredicted RBP6.89□□□□□ -1.31
CHMP3-209ENST00000494623 SPACA4Q8TDM5 124 aa6.89□□□□□ -1.31
CHMP3-209ENST00000494623 VPS13DQ5THJ4 4388 aa6.89□□□□□ -1.31
CHMP3-209ENST00000494623 WFDC13Q8IUB5 93 aa6.88□□□□□ -1.31
CHMP3-209ENST00000494623 PRKDCP78527 4128 aaKnown RBP6.88□□□□□ -1.31
CHMP3-209ENST00000494623 KRTAP13-1Q8IUC0 172 aa6.87□□□□□ -1.31
CHMP3-209ENST00000494623 IGLV9-49A0A0B4J1Y8 123 aa6.85□□□□□ -1.31
CHMP3-209ENST00000494623 RTL8CO15255 209 aa6.85□□□□□ -1.31
CHMP3-209ENST00000494623 SMIM26A0A096LP01 95 aa6.85□□□□□ -1.31
CHMP3-209ENST00000494623 PMAIP1Q13794 54 aa6.85□□□□□ -1.31
CHMP3-209ENST00000494623 KMT2AQ03164 3969 aa6.83□□□□□ -1.32
CHMP3-209ENST00000494623 LCE6AA0A183 80 aa6.83□□□□□ -1.32
CHMP3-209ENST00000494623 LINC00472Q9H8W2 130 aa6.83□□□□□ -1.32
CHMP3-209ENST00000494623 MEGF8Q7Z7M0 2845 aa6.83□□□□□ -1.32
CHMP3-209ENST00000494623 DNAH2Q9P225 4427 aa6.83□□□□□ -1.32
CHMP3-209ENST00000494623 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
CHMP3-209ENST00000494623 Q6ZR54 194 aa6.82□□□□□ -1.32
CHMP3-209ENST00000494623 HECTD4Q9Y4D8 3996 aa6.82□□□□□ -1.32
CHMP3-209ENST00000494623 PRR15Q8IV56 129 aa6.81□□□□□ -1.32
CHMP3-209ENST00000494623 PSORS1C2Q9UIG4 136 aa6.81□□□□□ -1.32
CHMP3-209ENST00000494623 C4orf48Q5BLP8 95 aa6.8□□□□□ -1.32
CHMP3-209ENST00000494623 DNHD1Q96M86 4753 aa6.8□□□□□ -1.32
CHMP3-209ENST00000494623 A8MWP4 228 aa6.8□□□□□ -1.32
CHMP3-209ENST00000494623 CASC2Q6XLA1 102 aa6.8□□□□□ -1.32
CHMP3-209ENST00000494623 IGLV5-52A0A0A0MRZ9 124 aa6.79□□□□□ -1.32
CHMP3-209ENST00000494623 ANAPC11Q9NYG5 84 aa6.79□□□□□ -1.32
CHMP3-209ENST00000494623 KRTAP29-1A8MX34 341 aaPredicted RBP6.79□□□□□ -1.32
CHMP3-209ENST00000494623 ZCCHC13Q8WW36 166 aaKnown RBP6.78□□□□□ -1.32
CHMP3-209ENST00000494623 TGP01266 2768 aa6.78□□□□□ -1.32
CHMP3-209ENST00000494623 CD164Q04900 197 aa6.78□□□□□ -1.32
CHMP3-209ENST00000494623 C1orf134Q5TEV5 83 aa6.78□□□□□ -1.32
CHMP3-209ENST00000494623 LY6G6CO95867 125 aa6.78□□□□□ -1.32
CHMP3-209ENST00000494623 DNAH17Q9UFH2 4485 aa6.77□□□□□ -1.33
CHMP3-209ENST00000494623 PLAC8Q9NZF1 115 aa6.77□□□□□ -1.33
CHMP3-209ENST00000494623 LINC00483Q53H64 154 aa6.77□□□□□ -1.33
CHMP3-209ENST00000494623 MP68P56378 58 aa6.76□□□□□ -1.33
CHMP3-209ENST00000494623 FAM229BQ4G0N7 80 aa6.76□□□□□ -1.33
CHMP3-209ENST00000494623 ZNF706Q9Y5V0 76 aaPredicted RBP6.76□□□□□ -1.33
CHMP3-209ENST00000494623 DNAH8Q96JB1 4490 aa6.75□□□□□ -1.33
CHMP3-209ENST00000494623 ZNF861PO60384 105 aa6.75□□□□□ -1.33
CHMP3-209ENST00000494623 MOBPQ13875 183 aa6.75□□□□□ -1.33
CHMP3-209ENST00000494623 NDUFB1O75438 58 aa6.74□□□□□ -1.33
CHMP3-209ENST00000494623 LINC00208Q96KT6 92 aa6.74□□□□□ -1.33
CHMP3-209ENST00000494623 WWC2-AS2Q96NR7 200 aa6.74□□□□□ -1.33
CHMP3-209ENST00000494623 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
CHMP3-209ENST00000494623 PRR4Q16378 134 aa6.74□□□□□ -1.33
CHMP3-209ENST00000494623 FBN3Q75N90 2809 aa6.73□□□□□ -1.33
CHMP3-209ENST00000494623 MPLKIPQ8TAP9 179 aa6.73□□□□□ -1.33
CHMP3-209ENST00000494623 Q96NJ1 140 aa6.73□□□□□ -1.33
CHMP3-209ENST00000494623 MMP24-AS1A0A0U1RRL7 71 aa6.72□□□□□ -1.33
CHMP3-209ENST00000494623 H0Y9P7 68 aa6.72□□□□□ -1.33
CHMP3-209ENST00000494623 hDV103S1A0JD37 113 aa6.7□□□□□ -1.34
CHMP3-209ENST00000494623 C1orf64Q8NEQ6 169 aa6.7□□□□□ -1.34
CHMP3-209ENST00000494623 TRAV22A0A0B4J277 110 aa6.69□□□□□ -1.34
CHMP3-209ENST00000494623 IGLV7-43P04211 117 aa6.69□□□□□ -1.34
CHMP3-209ENST00000494623 IGHV6-1A0A0B4J1U7 121 aa6.68□□□□□ -1.34
CHMP3-209ENST00000494623 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
CHMP3-209ENST00000494623 CDK2AP2O75956 126 aa6.67□□□□□ -1.34
CHMP3-209ENST00000494623 C8orf17Q9NRJ1 99 aa6.66□□□□□ -1.34
CHMP3-209ENST00000494623 CIRBP-AS1Q8TBR5 109 aa6.65□□□□□ -1.34
CHMP3-209ENST00000494623 DNAH6Q9C0G6 4158 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms