RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 KRTAP12-2P59991 146 aa2.81□□□□□ -1.96
PTCD3-219ENST00000494323 MT1HP80294 61 aa2.81□□□□□ -1.96
PTCD3-219ENST00000494323 MOBPQ13875 183 aa2.81□□□□□ -1.96
PTCD3-219ENST00000494323 KRTAP19-2Q3LHN2 52 aa2.81□□□□□ -1.96
PTCD3-219ENST00000494323 TMEM170BQ5T4T1 132 aa2.81□□□□□ -1.96
PTCD3-219ENST00000494323 ETDCA0A1B0GVM5 59 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 C11orf86A6NJI1 115 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 NCR3O14931 201 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 SLC25A20O43772 301 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 SMIM13P0DJ93 91 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 PCOTHQ58A44 107 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 LINC01545Q5VT33 79 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 SSBP3-AS1Q7Z2R9 100 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 BOD1L2Q8IYS8 172 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 FAM19A2Q8N3H0 131 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 IFI27L1Q96BM0 104 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 NDUFA12Q9UI09 145 aa2.8□□□□□ -1.96
PTCD3-219ENST00000494323 A0A096LNJ9 63 aa2.79□□□□□ -1.96
PTCD3-219ENST00000494323 TRAV12-1A0A0B4J245 112 aa2.79□□□□□ -1.96
PTCD3-219ENST00000494323 TRBV10-3A0A0K0K1G6 114 aa2.79□□□□□ -1.96
PTCD3-219ENST00000494323 PLNP26678 52 aa2.79□□□□□ -1.96
PTCD3-219ENST00000494323 SPRR1AP35321 89 aa2.79□□□□□ -1.96
PTCD3-219ENST00000494323 LINC00483Q53H64 154 aa2.79□□□□□ -1.96
PTCD3-219ENST00000494323 PMCHL2Q9BQD1 86 aa2.79□□□□□ -1.96
PTCD3-219ENST00000494323 KCNQ1DNQ9H478 68 aa2.79□□□□□ -1.96
PTCD3-219ENST00000494323 A0A1B0GVX0 72 aa2.78□□□□□ -1.96
PTCD3-219ENST00000494323 C9orf92A6NGG3 77 aa2.78□□□□□ -1.96
PTCD3-219ENST00000494323 SPATA45Q537H7 98 aa2.78□□□□□ -1.96
PTCD3-219ENST00000494323 MEIG1Q5JSS6 88 aa2.78□□□□□ -1.96
PTCD3-219ENST00000494323 MIR7-3HGQ8N6C7 128 aa2.78□□□□□ -1.96
PTCD3-219ENST00000494323 UQCR10Q9UDW1 63 aa2.78□□□□□ -1.96
PTCD3-219ENST00000494323 TMEM223A0PJW6 202 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 M0R2T5 61 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 DPM2O94777 84 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 IGKCP01834 107 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 DDTP30046 118 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 HERVK_113P61574 105 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 RPS29P62273 56 aaKnown RBP2.77□□□□□ -1.97
PTCD3-219ENST00000494323 C9orf153Q5TBE3 101 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 HRCT1Q6UXD1 115 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 PCP2Q8IVA1 136 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 Q9BRP9 147 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 MIEN1Q9BRT3 115 aa2.77□□□□□ -1.97
PTCD3-219ENST00000494323 LCE3AQ5TA76 89 aa2.76□□□□□ -1.97
PTCD3-219ENST00000494323 SLC25A34Q6PIV7 304 aa2.76□□□□□ -1.97
PTCD3-219ENST00000494323 SFTA2Q6UW10 78 aa2.76□□□□□ -1.97
PTCD3-219ENST00000494323 ST20-AS1Q8NBB2 130 aa2.76□□□□□ -1.97
PTCD3-219ENST00000494323 DLEU1O43261 78 aa2.75□□□□□ -1.97
PTCD3-219ENST00000494323 Q6ZVH6 145 aa2.75□□□□□ -1.97
PTCD3-219ENST00000494323 M0R143 59 aa2.74□□□□□ -1.97
PTCD3-219ENST00000494323 COX8AP10176 69 aa2.74□□□□□ -1.97
PTCD3-219ENST00000494323 Q6ZRX8 168 aa2.74□□□□□ -1.97
PTCD3-219ENST00000494323 ATOH7Q8N100 152 aa2.74□□□□□ -1.97
PTCD3-219ENST00000494323 Q8N9L7 120 aa2.74□□□□□ -1.97
PTCD3-219ENST00000494323 PRO1933Q9H354 126 aa2.74□□□□□ -1.97
PTCD3-219ENST00000494323 MYMXA0A1B0GTQ4 84 aa2.73□□□□□ -1.97
PTCD3-219ENST00000494323 LINC00587B1AMM8 73 aa2.73□□□□□ -1.97
PTCD3-219ENST00000494323 IGLV6-57P01721 117 aa2.73□□□□□ -1.97
PTCD3-219ENST00000494323 NPC2P61916 151 aa2.73□□□□□ -1.97
PTCD3-219ENST00000494323 S100A7L2Q5SY68 101 aa2.73□□□□□ -1.97
PTCD3-219ENST00000494323 COX6B2Q6YFQ2 88 aa2.73□□□□□ -1.97
PTCD3-219ENST00000494323 HIGD1BQ9P298 99 aa2.73□□□□□ -1.97
PTCD3-219ENST00000494323 LOC107984156A0A0G2JMH3 177 aa2.72□□□□□ -1.97
PTCD3-219ENST00000494323 TRBV10-2A0A0K0K1G8 114 aa2.72□□□□□ -1.97
PTCD3-219ENST00000494323 H7C2G1 150 aa2.72□□□□□ -1.97
PTCD3-219ENST00000494323 ZNF73O43830 326 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-219ENST00000494323 TSPEAR-AS2P59090 65 aa2.72□□□□□ -1.97
PTCD3-219ENST00000494323 HSD52Q0P140 79 aa2.72□□□□□ -1.97
PTCD3-219ENST00000494323 TAL2Q16559 108 aa2.72□□□□□ -1.97
PTCD3-219ENST00000494323 ARL17AQ8IVW1 177 aa2.72□□□□□ -1.97
PTCD3-219ENST00000494323 C14orf144Q96I85 54 aa2.72□□□□□ -1.97
PTCD3-219ENST00000494323 TRAV23DV6A0A075B6W5 121 aa2.71□□□□□ -1.98
PTCD3-219ENST00000494323 A0A0G2JQZ4 141 aa2.71□□□□□ -1.98
PTCD3-219ENST00000494323 LEPROTO15243 131 aa2.71□□□□□ -1.98
PTCD3-219ENST00000494323 LGALS3P17931 250 aaKnown RBP2.71□□□□□ -1.98
PTCD3-219ENST00000494323 VAMP3Q15836 100 aa2.71□□□□□ -1.98
PTCD3-219ENST00000494323 COL5A1-AS1Q5SY13 56 aa2.71□□□□□ -1.98
PTCD3-219ENST00000494323 DEFB105AQ8NG35 78 aa2.71□□□□□ -1.98
PTCD3-219ENST00000494323 COPS9Q8WXC6 57 aa2.71□□□□□ -1.98
PTCD3-219ENST00000494323 V9GYY9 64 aa2.71□□□□□ -1.98
PTCD3-219ENST00000494323 ZNF815PA8K554 130 aa2.7□□□□□ -1.98
PTCD3-219ENST00000494323 J3QQQ9 107 aa2.7□□□□□ -1.98
PTCD3-219ENST00000494323 HINT1P49773 126 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-219ENST00000494323 DEFB116Q30KQ4 102 aa2.7□□□□□ -1.98
PTCD3-219ENST00000494323 Q6Q795 121 aa2.7□□□□□ -1.98
PTCD3-219ENST00000494323 SOSTDC1Q6X4U4 206 aa2.7□□□□□ -1.98
PTCD3-219ENST00000494323 SCGB1D4Q6XE38 83 aa2.7□□□□□ -1.98
PTCD3-219ENST00000494323 LIMD2Q9BT23 127 aa2.7□□□□□ -1.98
PTCD3-219ENST00000494323 SPANXB1Q9NS25 103 aaPredicted RBP2.7□□□□□ -1.98
PTCD3-219ENST00000494323 LAMTOR3Q9UHA4 124 aa2.7□□□□□ -1.98
PTCD3-219ENST00000494323 NDUFC2O95298 119 aa2.69□□□□□ -1.98
PTCD3-219ENST00000494323 C1orf195Q5TG92 126 aa2.69□□□□□ -1.98
PTCD3-219ENST00000494323 OR13C6PQ8NH95 151 aa2.69□□□□□ -1.98
PTCD3-219ENST00000494323 SNHG12Q9BXW3 62 aa2.69□□□□□ -1.98
PTCD3-219ENST00000494323 SMIM26A0A096LP01 95 aa2.68□□□□□ -1.98
PTCD3-219ENST00000494323 TIMM17BO60830 172 aa2.68□□□□□ -1.98
PTCD3-219ENST00000494323 SPRR1BP22528 89 aa2.68□□□□□ -1.98
PTCD3-219ENST00000494323 RPL37P61927 97 aaKnown RBP2.68□□□□□ -1.98
PTCD3-219ENST00000494323 BATFQ16520 125 aa2.68□□□□□ -1.98
PTCD3-219ENST00000494323 BVES-AS1Q5T3Y7 98 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms