RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 Q8N9L7 120 aa6.05□□□□□ -1.44
NPHP3-209ENST00000493732 H7BZZ5 65 aa6.05□□□□□ -1.44
NPHP3-209ENST00000493732 IGFL1Q6UW32 110 aa6.05□□□□□ -1.44
NPHP3-209ENST00000493732 OCR1Q9BZK8 76 aa6.05□□□□□ -1.44
NPHP3-209ENST00000493732 EPM2AB3EWF7 344 aa6.04□□□□□ -1.44
NPHP3-209ENST00000493732 PHF5AQ7RTV0 110 aaKnown RBP6.04□□□□□ -1.44
NPHP3-209ENST00000493732 TMEM254Q8TBM7 123 aa6.04□□□□□ -1.44
NPHP3-209ENST00000493732 STAB2Q8WWQ8 2551 aa6.03□□□□□ -1.44
NPHP3-209ENST00000493732 Q6ZRN7 208 aaPredicted RBP6.03□□□□□ -1.44
NPHP3-209ENST00000493732 CHTF8P0CG12 524 aa6.02□□□□□ -1.45
NPHP3-209ENST00000493732 DNAH9Q9NYC9 4486 aa6.01□□□□□ -1.45
NPHP3-209ENST00000493732 DSCR10P59022 87 aa6.01□□□□□ -1.45
NPHP3-209ENST00000493732 SNURFQ9Y675 71 aa6.01□□□□□ -1.45
NPHP3-209ENST00000493732 SERP1Q9Y6X1 66 aa6.01□□□□□ -1.45
NPHP3-209ENST00000493732 DYNC2H1Q8NCM8 4307 aaKnown RBP5.99□□□□□ -1.45
NPHP3-209ENST00000493732 A0A087WSZ3 146 aa5.99□□□□□ -1.45
NPHP3-209ENST00000493732 A0A0U1RQV1 116 aa5.99□□□□□ -1.45
NPHP3-209ENST00000493732 HCG22E2RYF7 251 aa5.99□□□□□ -1.45
NPHP3-209ENST00000493732 SPACA4Q8TDM5 124 aa5.99□□□□□ -1.45
NPHP3-209ENST00000493732 J3QL48 77 aa5.98□□□□□ -1.45
NPHP3-209ENST00000493732 K7EQZ3 153 aa5.98□□□□□ -1.45
NPHP3-209ENST00000493732 RPL37AP61513 92 aaKnown RBP5.98□□□□□ -1.45
NPHP3-209ENST00000493732 A0A087WTM6 91 aa5.97□□□□□ -1.45
NPHP3-209ENST00000493732 LCE6AA0A183 80 aa5.97□□□□□ -1.45
NPHP3-209ENST00000493732 ZNF706Q9Y5V0 76 aaPredicted RBP5.97□□□□□ -1.45
NPHP3-209ENST00000493732 KRTAP13-1Q8IUC0 172 aa5.97□□□□□ -1.45
NPHP3-209ENST00000493732 KRTAP11-1Q8IUC1 163 aa5.97□□□□□ -1.45
NPHP3-209ENST00000493732 C4orf26Q17RF5 130 aa5.95□□□□□ -1.46
NPHP3-209ENST00000493732 LINC00336Q6ZUF6 198 aa5.95□□□□□ -1.46
NPHP3-209ENST00000493732 FAM30AQ9NZY2 134 aa5.95□□□□□ -1.46
NPHP3-209ENST00000493732 COL7A1Q02388 2944 aa5.94□□□□□ -1.46
NPHP3-209ENST00000493732 Q6ZR54 194 aa5.94□□□□□ -1.46
NPHP3-209ENST00000493732 RTL8CO15255 209 aa5.93□□□□□ -1.46
NPHP3-209ENST00000493732 HRCT1Q6UXD1 115 aa5.93□□□□□ -1.46
NPHP3-209ENST00000493732 C1orf195Q5TG92 126 aa5.93□□□□□ -1.46
NPHP3-209ENST00000493732 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.93□□□□□ -1.46
NPHP3-209ENST00000493732 A0A0G2JQZ4 141 aa5.92□□□□□ -1.46
NPHP3-209ENST00000493732 A8MWP4 228 aa5.92□□□□□ -1.46
NPHP3-209ENST00000493732 PANO1I0J062 215 aa5.92□□□□□ -1.46
NPHP3-209ENST00000493732 LINC00483Q53H64 154 aa5.92□□□□□ -1.46
NPHP3-209ENST00000493732 Q5XG85 94 aa5.92□□□□□ -1.46
NPHP3-209ENST00000493732 PRR15Q8IV56 129 aa5.92□□□□□ -1.46
NPHP3-209ENST00000493732 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
NPHP3-209ENST00000493732 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
NPHP3-209ENST00000493732 NDUFB1O75438 58 aa5.91□□□□□ -1.46
NPHP3-209ENST00000493732 PLAC8Q9NZF1 115 aa5.91□□□□□ -1.46
NPHP3-209ENST00000493732 OXTP01178 125 aa5.91□□□□□ -1.46
NPHP3-209ENST00000493732 MP68P56378 58 aa5.91□□□□□ -1.46
NPHP3-209ENST00000493732 C1orf134Q5TEV5 83 aa5.91□□□□□ -1.46
NPHP3-209ENST00000493732 DNAH10Q8IVF4 4471 aa5.9□□□□□ -1.46
NPHP3-209ENST00000493732 IGLV5-52A0A0A0MRZ9 124 aa5.89□□□□□ -1.47
NPHP3-209ENST00000493732 H3BPC8 53 aa5.89□□□□□ -1.47
NPHP3-209ENST00000493732 DEFB116Q30KQ4 102 aa5.89□□□□□ -1.47
NPHP3-209ENST00000493732 CASC2Q6XLA1 102 aa5.89□□□□□ -1.47
NPHP3-209ENST00000493732 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
NPHP3-209ENST00000493732 ZNF861PO60384 105 aa5.88□□□□□ -1.47
NPHP3-209ENST00000493732 WFDC13Q8IUB5 93 aa5.88□□□□□ -1.47
NPHP3-209ENST00000493732 ZCCHC13Q8WW36 166 aaKnown RBP5.88□□□□□ -1.47
NPHP3-209ENST00000493732 PSORS1C2Q9UIG4 136 aa5.87□□□□□ -1.47
NPHP3-209ENST00000493732 PLECQ15149 4684 aaKnown RBP5.87□□□□□ -1.47
NPHP3-209ENST00000493732 VPS13DQ5THJ4 4388 aa5.86□□□□□ -1.47
NPHP3-209ENST00000493732 IGLV9-49A0A0B4J1Y8 123 aa5.86□□□□□ -1.47
NPHP3-209ENST00000493732 hDV103S1A0JD37 113 aa5.84□□□□□ -1.47
NPHP3-209ENST00000493732 TENM2Q9NT68 2774 aa5.84□□□□□ -1.47
NPHP3-209ENST00000493732 MOBPQ13875 183 aa5.84□□□□□ -1.48
NPHP3-209ENST00000493732 WWC2-AS2Q96NR7 200 aa5.84□□□□□ -1.48
NPHP3-209ENST00000493732 LYSTQ99698 3801 aa5.83□□□□□ -1.48
NPHP3-209ENST00000493732 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
NPHP3-209ENST00000493732 CSMD3Q7Z407 3707 aa5.82□□□□□ -1.48
NPHP3-209ENST00000493732 CDK2AP2O75956 126 aa5.82□□□□□ -1.48
NPHP3-209ENST00000493732 LY6G6CO95867 125 aa5.82□□□□□ -1.48
NPHP3-209ENST00000493732 CD164Q04900 197 aa5.82□□□□□ -1.48
NPHP3-209ENST00000493732 CYP4F30PQ9H0H9 118 aa5.82□□□□□ -1.48
NPHP3-209ENST00000493732 MMP24-AS1A0A0U1RRL7 71 aa5.81□□□□□ -1.48
NPHP3-209ENST00000493732 H0Y9P7 68 aa5.81□□□□□ -1.48
NPHP3-209ENST00000493732 IGLV7-43P04211 117 aa5.81□□□□□ -1.48
NPHP3-209ENST00000493732 TRAV22A0A0B4J277 110 aa5.8□□□□□ -1.48
NPHP3-209ENST00000493732 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
NPHP3-209ENST00000493732 Q96NJ1 140 aa5.8□□□□□ -1.48
NPHP3-209ENST00000493732 SPANXA2-OT1Q8N9U9 137 aa5.8□□□□□ -1.48
NPHP3-209ENST00000493732 DNAH7Q8WXX0 4024 aa5.79□□□□□ -1.48
NPHP3-209ENST00000493732 ASB16-AS1Q495Z4 193 aa5.78□□□□□ -1.48
NPHP3-209ENST00000493732 FP248Q71RG6 208 aaPredicted RBP5.78□□□□□ -1.48
NPHP3-209ENST00000493732 SSBP3-AS1Q7Z2R9 100 aa5.78□□□□□ -1.48
NPHP3-209ENST00000493732 A0A1B0GVX0 72 aa5.78□□□□□ -1.48
NPHP3-209ENST00000493732 C8orf17Q9NRJ1 99 aa5.78□□□□□ -1.48
NPHP3-209ENST00000493732 STARD9Q9P2P6 4700 aa5.76□□□□□ -1.49
NPHP3-209ENST00000493732 PRKDCP78527 4128 aaKnown RBP5.76□□□□□ -1.49
NPHP3-209ENST00000493732 C1orf64Q8NEQ6 169 aa5.76□□□□□ -1.49
NPHP3-209ENST00000493732 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
NPHP3-209ENST00000493732 DNAH17Q9UFH2 4485 aa5.75□□□□□ -1.49
NPHP3-209ENST00000493732 SRRM2Q9UQ35 2752 aaKnown RBP5.74□□□□□ -1.49
NPHP3-209ENST00000493732 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
NPHP3-209ENST00000493732 KRTAP21-3Q3LHN1 58 aa5.73□□□□□ -1.49
NPHP3-209ENST00000493732 CIRBP-AS1Q8TBR5 109 aa5.73□□□□□ -1.49
NPHP3-209ENST00000493732 MRPL34Q9BQ48 92 aaKnown RBP5.73□□□□□ -1.49
NPHP3-209ENST00000493732 ANAPC11Q9NYG5 84 aa5.72□□□□□ -1.49
NPHP3-209ENST00000493732 MEGF8Q7Z7M0 2845 aa5.72□□□□□ -1.49
NPHP3-209ENST00000493732 FAM229BQ4G0N7 80 aa5.71□□□□□ -1.5
NPHP3-209ENST00000493732 Q6ZSA8 131 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms