RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 MEIG1Q5JSS6 88 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 HRCT1Q6UXD1 115 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 ATOH7Q8N100 152 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 LINC00304Q8N9R0 145 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 SMCR5Q8TEV8 140 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 IFI27L1Q96BM0 104 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 SPRR4Q96PI1 79 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 Q9BRP9 147 aa1.54□□□□□ -2.16
PTCD3-218ENST00000493430 FAT4Q6V0I7 4981 aa1.53□□□□□ -2.16
PTCD3-218ENST00000493430 TRAV9-1A0A075B6T8 112 aa1.53□□□□□ -2.16
PTCD3-218ENST00000493430 C9orf92A6NGG3 77 aa1.53□□□□□ -2.16
PTCD3-218ENST00000493430 RPL28P46779 137 aaKnown RBP1.53□□□□□ -2.16
PTCD3-218ENST00000493430 KRTAP12-4P60329 112 aa1.53□□□□□ -2.16
PTCD3-218ENST00000493430 C4orf26Q17RF5 130 aa1.53□□□□□ -2.16
PTCD3-218ENST00000493430 COLCA2A8K830 154 aa1.52□□□□□ -2.17
PTCD3-218ENST00000493430 C8orf87E5RJ46 101 aa1.52□□□□□ -2.17
PTCD3-218ENST00000493430 H3BRM9 83 aa1.52□□□□□ -2.17
PTCD3-218ENST00000493430 SCGB1C2P0DMR2 95 aa1.52□□□□□ -2.17
PTCD3-218ENST00000493430 CRYGAP11844 174 aa1.52□□□□□ -2.17
PTCD3-218ENST00000493430 DEFB116Q30KQ4 102 aa1.52□□□□□ -2.17
PTCD3-218ENST00000493430 RBM12B-AS1Q9P1G2 102 aa1.52□□□□□ -2.17
PTCD3-218ENST00000493430 NDUFA12Q9UI09 145 aa1.52□□□□□ -2.17
PTCD3-218ENST00000493430 MUC2Q02817 5179 aa1.52□□□□□ -2.17
PTCD3-218ENST00000493430 HIST1H2BKO60814 126 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 LEPROTL1O95214 131 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 HIST1H2BJP06899 126 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 HIST1H2BOP23527 126 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 HIST1H2BBP33778 126 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 HIST1H2BDP58876 126 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 HIST1H2BCP62807 126 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 HIST2H2BEQ16778 126 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 KRTAP19-2Q3LHN2 52 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.51□□□□□ -2.17
PTCD3-218ENST00000493430 C9orf153Q5TBE3 101 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 SCGB1D4Q6XE38 83 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 SVBPQ8N300 66 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 HIST1H2BHQ93079 126 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 HIST1H2BNQ99877 126 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 HIST1H2BMQ99879 126 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 ANAPC13Q9BS18 74 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 PKIGQ9Y2B9 76 aa1.51□□□□□ -2.17
PTCD3-218ENST00000493430 TRAV12-1A0A0B4J245 112 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 ETDCA0A1B0GVM5 59 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 J3QQQ9 107 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 LEPROTO15243 131 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 C3orf79P0CE67 100 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 DDTP30046 118 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 SPRR1AP35321 89 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 KRTDAPP60985 99 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 SEC11AP67812 179 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 LUZP6Q538Z0 58 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 Q5W150 140 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 DEFB105AQ8NG35 78 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 C12orf57Q99622 126 aa1.5□□□□□ -2.17
PTCD3-218ENST00000493430 ZNF706Q9Y5V0 76 aaPredicted RBP1.5□□□□□ -2.17
PTCD3-218ENST00000493430 TRAV23DV6A0A075B6W5 121 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 A0A1B0GV72 72 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 ZNF815PA8K554 130 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 SYS1-DBNDD2H3BUS1 97 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 DPM2O94777 84 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 IGKCP01834 107 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 LGALS3P17931 250 aaKnown RBP1.49□□□□□ -2.17
PTCD3-218ENST00000493430 MP68P56378 58 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 NDUFA5Q16718 116 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 FAM229BQ4G0N7 80 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 LINC00483Q53H64 154 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 Q6ZRX8 168 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 OR13C6PQ8NH95 151 aa1.49□□□□□ -2.17
PTCD3-218ENST00000493430 CHCHD1Q96BP2 118 aaKnown RBP1.49□□□□□ -2.17
PTCD3-218ENST00000493430 MYMXA0A1B0GTQ4 84 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 IGLV6-57P01721 117 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 G0S2P27469 103 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 TPRXLQ17RH7 258 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 PCOTHQ58A44 107 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 S100A7L2Q5SY68 101 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 LINC01545Q5VT33 79 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 SPANXA2-OT1Q8N9U9 137 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 LINC00308Q8TCZ7 52 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 KCNQ1DNQ9H478 68 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 CRCT1Q9UGL9 99 aa1.48□□□□□ -2.17
PTCD3-218ENST00000493430 ZNF73O43830 326 aaPredicted RBP1.47□□□□□ -2.17
PTCD3-218ENST00000493430 IGKV4-1P06312 121 aa1.47□□□□□ -2.17
PTCD3-218ENST00000493430 KRTAP12-3P60328 96 aa1.47□□□□□ -2.17
PTCD3-218ENST00000493430 MT1HP80294 61 aa1.47□□□□□ -2.17
PTCD3-218ENST00000493430 COX17Q14061 63 aa1.47□□□□□ -2.17
PTCD3-218ENST00000493430 C1orf195Q5TG92 126 aa1.47□□□□□ -2.17
PTCD3-218ENST00000493430 SLC25A34Q6PIV7 304 aa1.47□□□□□ -2.17
PTCD3-218ENST00000493430 C20orf202A1L168 122 aa1.46□□□□□ -2.18
PTCD3-218ENST00000493430 H3BUT2 72 aa1.46□□□□□ -2.18
PTCD3-218ENST00000493430 ASB16-AS1Q495Z4 193 aa1.46□□□□□ -2.18
PTCD3-218ENST00000493430 MUSTN1Q8IVN3 82 aa1.46□□□□□ -2.18
PTCD3-218ENST00000493430 SMIM11BQ8TCY0 68 aa1.46□□□□□ -2.18
PTCD3-218ENST00000493430 MIEN1Q9BRT3 115 aa1.46□□□□□ -2.18
PTCD3-218ENST00000493430 HSPB8Q9UJY1 196 aa1.46□□□□□ -2.18
PTCD3-218ENST00000493430 FLGP20930 4061 aaPredicted RBP1.45□□□□□ -2.18
PTCD3-218ENST00000493430 K7ERS5 55 aa1.45□□□□□ -2.18
PTCD3-218ENST00000493430 COX7BP24311 80 aa1.45□□□□□ -2.18
PTCD3-218ENST00000493430 PLNP26678 52 aa1.45□□□□□ -2.18
PTCD3-218ENST00000493430 ELOF1P60002 83 aaKnown RBP1.45□□□□□ -2.18
PTCD3-218ENST00000493430 BATFQ16520 125 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms