RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 A6NDN8 102 aa5.88□□□□□ -1.47
CACNA1C-228ENST00000492150 KRTAP5-9P26371 169 aa5.88□□□□□ -1.47
CACNA1C-228ENST00000492150 Q96NJ1 140 aa5.88□□□□□ -1.47
CACNA1C-228ENST00000492150 F8WEM9 126 aa5.87□□□□□ -1.47
CACNA1C-228ENST00000492150 SYS1-DBNDD2H3BUS1 97 aa5.87□□□□□ -1.47
CACNA1C-228ENST00000492150 IGFL1Q6UW32 110 aa5.87□□□□□ -1.47
CACNA1C-228ENST00000492150 NHP2Q9NX24 153 aaKnown RBP5.87□□□□□ -1.47
CACNA1C-228ENST00000492150 TRBV20-1A0A075B6N2 111 aa5.86□□□□□ -1.47
CACNA1C-228ENST00000492150 LINC01545Q5VT33 79 aa5.86□□□□□ -1.47
CACNA1C-228ENST00000492150 Q6JHZ5 121 aa5.86□□□□□ -1.47
CACNA1C-228ENST00000492150 CLEC2BQ92478 149 aa5.86□□□□□ -1.47
CACNA1C-228ENST00000492150 C20orf166-AS1Q96NR2 134 aa5.86□□□□□ -1.47
CACNA1C-228ENST00000492150 GPR98Q8WXG9 6306 aa5.86□□□□□ -1.47
CACNA1C-228ENST00000492150 A8MUU9 505 aa5.85□□□□□ -1.47
CACNA1C-228ENST00000492150 SMIM11BQ8TCY0 68 aa5.85□□□□□ -1.47
CACNA1C-228ENST00000492150 IFITM1P13164 125 aa5.84□□□□□ -1.47
CACNA1C-228ENST00000492150 MUSTN1Q8IVN3 82 aa5.83□□□□□ -1.48
CACNA1C-228ENST00000492150 LST1O00453 97 aa5.82□□□□□ -1.48
CACNA1C-228ENST00000492150 OCIAD2Q56VL3 154 aa5.82□□□□□ -1.48
CACNA1C-228ENST00000492150 PET117Q6UWS5 81 aa5.82□□□□□ -1.48
CACNA1C-228ENST00000492150 LINC00575Q6W349 94 aa5.82□□□□□ -1.48
CACNA1C-228ENST00000492150 SCGB1D4Q6XE38 83 aa5.82□□□□□ -1.48
CACNA1C-228ENST00000492150 COPS9Q8WXC6 57 aa5.82□□□□□ -1.48
CACNA1C-228ENST00000492150 TRAV13-2A0A0B4J235 113 aa5.81□□□□□ -1.48
CACNA1C-228ENST00000492150 Q6ZQY7 126 aa5.81□□□□□ -1.48
CACNA1C-228ENST00000492150 SLC7A5P1Q8MH63 180 aa5.81□□□□□ -1.48
CACNA1C-228ENST00000492150 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
CACNA1C-228ENST00000492150 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
CACNA1C-228ENST00000492150 KRTAP16-1A8MUX0 517 aa5.8□□□□□ -1.48
CACNA1C-228ENST00000492150 Q6ZVH6 145 aa5.8□□□□□ -1.48
CACNA1C-228ENST00000492150 COLCA2A8K830 154 aa5.79□□□□□ -1.48
CACNA1C-228ENST00000492150 FAM236DA0A1B0GTK5 79 aa5.78□□□□□ -1.48
CACNA1C-228ENST00000492150 hADV29S1A0JD25 119 aa5.78□□□□□ -1.48
CACNA1C-228ENST00000492150 FAM236CP0DP71 79 aa5.78□□□□□ -1.48
CACNA1C-228ENST00000492150 VAMP3Q15836 100 aa5.78□□□□□ -1.48
CACNA1C-228ENST00000492150 ANKRD39Q53RE8 183 aa5.78□□□□□ -1.48
CACNA1C-228ENST00000492150 C3orf79P0CE67 100 aa5.77□□□□□ -1.49
CACNA1C-228ENST00000492150 MPLKIPQ8TAP9 179 aa5.77□□□□□ -1.49
CACNA1C-228ENST00000492150 H3BUT2 72 aa5.75□□□□□ -1.49
CACNA1C-228ENST00000492150 HRES1P13985 223 aa5.75□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST1H2BKO60814 126 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST1H2BJP06899 126 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST1H2BOP23527 126 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST1H2BBP33778 126 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST1H2BDP58876 126 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 DSCR10P59022 87 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST1H2BCP62807 126 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST2H2BEQ16778 126 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST1H2BHQ93079 126 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST1H2BNQ99877 126 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 HIST1H2BMQ99879 126 aa5.74□□□□□ -1.49
CACNA1C-228ENST00000492150 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.73□□□□□ -1.49
CACNA1C-228ENST00000492150 SS18L2Q9UHA2 77 aa5.73□□□□□ -1.49
CACNA1C-228ENST00000492150 PPDPFLQ8WWR9 84 aa5.72□□□□□ -1.49
CACNA1C-228ENST00000492150 SNHG12Q9BXW3 62 aa5.72□□□□□ -1.49
CACNA1C-228ENST00000492150 KRTDAPP60985 99 aa5.71□□□□□ -1.5
CACNA1C-228ENST00000492150 RBM12B-AS1Q9P1G2 102 aa5.71□□□□□ -1.5
CACNA1C-228ENST00000492150 SCGB1D1O95968 90 aa5.7□□□□□ -1.5
CACNA1C-228ENST00000492150 ATOH7Q8N100 152 aa5.7□□□□□ -1.5
CACNA1C-228ENST00000492150 NOTCH2NLQ7Z3S9 236 aa5.69□□□□□ -1.5
CACNA1C-228ENST00000492150 TEN1Q86WV5 123 aa5.69□□□□□ -1.5
CACNA1C-228ENST00000492150 A0A087WSZ3 146 aa5.68□□□□□ -1.5
CACNA1C-228ENST00000492150 LINC00313P59037 77 aa5.65□□□□□ -1.5
CACNA1C-228ENST00000492150 BVES-AS1Q5T3Y7 98 aa5.64□□□□□ -1.51
CACNA1C-228ENST00000492150 SIGMAR1Q99720 223 aa5.64□□□□□ -1.51
CACNA1C-228ENST00000492150 NDUFV3P56181 108 aaKnown RBP5.63□□□□□ -1.51
CACNA1C-228ENST00000492150 COA6Q5JTJ3 125 aaKnown RBP5.63□□□□□ -1.51
CACNA1C-228ENST00000492150 C12orf57Q99622 126 aa5.61□□□□□ -1.51
CACNA1C-228ENST00000492150 A0A1W2PNM2 257 aa5.6□□□□□ -1.51
CACNA1C-228ENST00000492150 SNRPEP62304 92 aaKnown RBP5.6□□□□□ -1.51
CACNA1C-228ENST00000492150 H3BMG7 143 aa5.59□□□□□ -1.51
CACNA1C-228ENST00000492150 IGKV4-1P06312 121 aa5.59□□□□□ -1.51
CACNA1C-228ENST00000492150 MTURNQ8N3F0 131 aa5.58□□□□□ -1.52
CACNA1C-228ENST00000492150 FAM218AQ96MZ4 157 aa5.58□□□□□ -1.52
CACNA1C-228ENST00000492150 A8MWP4 228 aa5.57□□□□□ -1.52
CACNA1C-228ENST00000492150 A6NN06 94 aa5.56□□□□□ -1.52
CACNA1C-228ENST00000492150 Q8N9P0 234 aaPredicted RBP5.56□□□□□ -1.52
CACNA1C-228ENST00000492150 DEFB116Q30KQ4 102 aa5.55□□□□□ -1.52
CACNA1C-228ENST00000492150 IGHV6-1A0A0B4J1U7 121 aa5.54□□□□□ -1.52
CACNA1C-228ENST00000492150 H0YGX0 51 aa5.54□□□□□ -1.52
CACNA1C-228ENST00000492150 SNCGO76070 127 aa5.54□□□□□ -1.52
CACNA1C-228ENST00000492150 SPRR2EP22531 72 aa5.54□□□□□ -1.52
CACNA1C-228ENST00000492150 SPRR2BP35325 72 aa5.54□□□□□ -1.52
CACNA1C-228ENST00000492150 SPRR2AP35326 72 aa5.54□□□□□ -1.52
CACNA1C-228ENST00000492150 LINC00472Q9H8W2 130 aa5.54□□□□□ -1.52
CACNA1C-228ENST00000492150 SPINK7P58062 85 aa5.53□□□□□ -1.52
CACNA1C-228ENST00000492150 HIST1H4GQ99525 98 aa5.53□□□□□ -1.52
CACNA1C-228ENST00000492150 TRBV7-4A0A0J9YYF1 115 aa5.52□□□□□ -1.53
CACNA1C-228ENST00000492150 FABP2P12104 132 aa5.52□□□□□ -1.53
CACNA1C-228ENST00000492150 ZCCHC13Q8WW36 166 aaKnown RBP5.51□□□□□ -1.53
CACNA1C-228ENST00000492150 HSBP1L1C9JCN9 74 aa5.5□□□□□ -1.53
CACNA1C-228ENST00000492150 KRTAP3-3Q9BYR6 98 aa5.5□□□□□ -1.53
CACNA1C-228ENST00000492150 KRTAP3-2Q9BYR7 98 aa5.5□□□□□ -1.53
CACNA1C-228ENST00000492150 ANKRD29Q8N6D5 301 aa5.49□□□□□ -1.53
CACNA1C-228ENST00000492150 A0A1B0GX51 115 aa5.48□□□□□ -1.53
CACNA1C-228ENST00000492150 GHRHP01286 108 aa5.48□□□□□ -1.53
CACNA1C-228ENST00000492150 RAB37Q96AX2 223 aa5.48□□□□□ -1.53
CACNA1C-228ENST00000492150 C8orf87E5RJ46 101 aa5.47□□□□□ -1.53
CACNA1C-228ENST00000492150 A0A1B0GV72 72 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms