RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TEX49A0A1B0GTD5 131 aa4.77□□□□□ -1.65
HDAC3-211ENST00000491581 COA6Q5JTJ3 125 aaKnown RBP4.77□□□□□ -1.65
HDAC3-211ENST00000491581 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
HDAC3-211ENST00000491581 IGLV5-48A0A075B6I7 105 aa4.76□□□□□ -1.65
HDAC3-211ENST00000491581 PRO1933Q9H354 126 aa4.76□□□□□ -1.65
HDAC3-211ENST00000491581 C5orf52A6NGY3 159 aa4.75□□□□□ -1.65
HDAC3-211ENST00000491581 C12orf57Q99622 126 aa4.75□□□□□ -1.65
HDAC3-211ENST00000491581 A0A1B0GWB2 263 aa4.74□□□□□ -1.65
HDAC3-211ENST00000491581 AKR1D1P51857 326 aa4.74□□□□□ -1.65
HDAC3-211ENST00000491581 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
HDAC3-211ENST00000491581 SLC25A34Q6PIV7 304 aa4.73□□□□□ -1.65
HDAC3-211ENST00000491581 TRBV7-6A0A0J9YX20 115 aa4.72□□□□□ -1.65
HDAC3-211ENST00000491581 A4D1N5 150 aa4.72□□□□□ -1.65
HDAC3-211ENST00000491581 KRTAP10-6P60371 365 aaPredicted RBP4.72□□□□□ -1.65
HDAC3-211ENST00000491581 RPL37P61927 97 aaKnown RBP4.72□□□□□ -1.65
HDAC3-211ENST00000491581 CD164Q04900 197 aa4.72□□□□□ -1.65
HDAC3-211ENST00000491581 CBY1Q9Y3M2 126 aa4.72□□□□□ -1.65
HDAC3-211ENST00000491581 C20orf202A1L168 122 aa4.71□□□□□ -1.66
HDAC3-211ENST00000491581 IFITM1P13164 125 aa4.71□□□□□ -1.66
HDAC3-211ENST00000491581 Q6ZQY7 126 aa4.71□□□□□ -1.66
HDAC3-211ENST00000491581 HIST3H2BBQ8N257 126 aa4.71□□□□□ -1.66
HDAC3-211ENST00000491581 HIST1H2BLQ99880 126 aa4.71□□□□□ -1.66
HDAC3-211ENST00000491581 IGFL1Q6UW32 110 aa4.7□□□□□ -1.66
HDAC3-211ENST00000491581 LINC00575Q6W349 94 aa4.7□□□□□ -1.66
HDAC3-211ENST00000491581 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
HDAC3-211ENST00000491581 Q5XG85 94 aa4.69□□□□□ -1.66
HDAC3-211ENST00000491581 TRAV13-2A0A0B4J235 113 aa4.68□□□□□ -1.66
HDAC3-211ENST00000491581 H3BUT2 72 aa4.68□□□□□ -1.66
HDAC3-211ENST00000491581 Q6ZVH6 145 aa4.67□□□□□ -1.66
HDAC3-211ENST00000491581 hADV29S1A0JD25 119 aa4.66□□□□□ -1.66
HDAC3-211ENST00000491581 M0R2T5 61 aa4.66□□□□□ -1.66
HDAC3-211ENST00000491581 OBSCN-AS1Q96MR7 158 aa4.66□□□□□ -1.66
HDAC3-211ENST00000491581 TRBV7-7A0A0K0K1E9 115 aa4.65□□□□□ -1.67
HDAC3-211ENST00000491581 FAM218AQ96MZ4 157 aa4.65□□□□□ -1.67
HDAC3-211ENST00000491581 F8WEM9 126 aa4.64□□□□□ -1.67
HDAC3-211ENST00000491581 OCIAD2Q56VL3 154 aa4.64□□□□□ -1.67
HDAC3-211ENST00000491581 Q6Q795 121 aa4.64□□□□□ -1.67
HDAC3-211ENST00000491581 COX6B2Q6YFQ2 88 aa4.64□□□□□ -1.67
HDAC3-211ENST00000491581 COPS9Q8WXC6 57 aa4.64□□□□□ -1.67
HDAC3-211ENST00000491581 CLEC2BQ92478 149 aa4.64□□□□□ -1.67
HDAC3-211ENST00000491581 NHP2Q9NX24 153 aaKnown RBP4.64□□□□□ -1.67
HDAC3-211ENST00000491581 TCL1BO95988 128 aa4.63□□□□□ -1.67
HDAC3-211ENST00000491581 S100A2P29034 98 aa4.63□□□□□ -1.67
HDAC3-211ENST00000491581 SNRPEP62304 92 aaKnown RBP4.63□□□□□ -1.67
HDAC3-211ENST00000491581 SCGB1D1O95968 90 aa4.62□□□□□ -1.67
HDAC3-211ENST00000491581 VAMP3Q15836 100 aa4.62□□□□□ -1.67
HDAC3-211ENST00000491581 C14orf144Q96I85 54 aa4.62□□□□□ -1.67
HDAC3-211ENST00000491581 HIST1H4GQ99525 98 aa4.62□□□□□ -1.67
HDAC3-211ENST00000491581 CFC1BP0CG36 223 aa4.61□□□□□ -1.67
HDAC3-211ENST00000491581 CFC1P0CG37 223 aa4.61□□□□□ -1.67
HDAC3-211ENST00000491581 A0A1B0GV72 72 aa4.6□□□□□ -1.67
HDAC3-211ENST00000491581 HSBP1L1C9JCN9 74 aa4.6□□□□□ -1.67
HDAC3-211ENST00000491581 COX8AP10176 69 aa4.6□□□□□ -1.67
HDAC3-211ENST00000491581 Q96NJ1 140 aa4.6□□□□□ -1.67
HDAC3-211ENST00000491581 Q6JHZ5 121 aa4.59□□□□□ -1.67
HDAC3-211ENST00000491581 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.59□□□□□ -1.67
HDAC3-211ENST00000491581 C2orf91Q6ZV80 131 aa4.59□□□□□ -1.67
HDAC3-211ENST00000491581 KRTAP16-1A8MUX0 517 aa4.58□□□□□ -1.68
HDAC3-211ENST00000491581 DSCR10P59022 87 aa4.58□□□□□ -1.68
HDAC3-211ENST00000491581 SNHG12Q9BXW3 62 aa4.58□□□□□ -1.68
HDAC3-211ENST00000491581 PAM16Q9Y3D7 125 aa4.58□□□□□ -1.68
HDAC3-211ENST00000491581 LST1O00453 97 aa4.57□□□□□ -1.68
HDAC3-211ENST00000491581 S100A6P06703 90 aa4.57□□□□□ -1.68
HDAC3-211ENST00000491581 Q75L30 129 aa4.57□□□□□ -1.68
HDAC3-211ENST00000491581 A0A087WSZ3 146 aa4.56□□□□□ -1.68
HDAC3-211ENST00000491581 NDUFV3P56181 108 aaKnown RBP4.56□□□□□ -1.68
HDAC3-211ENST00000491581 BVES-AS1Q5T3Y7 98 aa4.56□□□□□ -1.68
HDAC3-211ENST00000491581 ATP11AUNQ6ZP68 121 aa4.56□□□□□ -1.68
HDAC3-211ENST00000491581 A0A1W2PNM2 257 aa4.55□□□□□ -1.68
HDAC3-211ENST00000491581 SPATA45Q537H7 98 aa4.55□□□□□ -1.68
HDAC3-211ENST00000491581 NOTCH2NLQ7Z3S9 236 aa4.55□□□□□ -1.68
HDAC3-211ENST00000491581 RAB37Q96AX2 223 aa4.55□□□□□ -1.68
HDAC3-211ENST00000491581 FXYD2P54710 66 aa4.54□□□□□ -1.68
HDAC3-211ENST00000491581 DEFB116Q30KQ4 102 aa4.54□□□□□ -1.68
HDAC3-211ENST00000491581 A8MUU9 505 aa4.53□□□□□ -1.68
HDAC3-211ENST00000491581 H3BMG7 143 aa4.53□□□□□ -1.68
HDAC3-211ENST00000491581 K7ERJ3 54 aa4.53□□□□□ -1.68
HDAC3-211ENST00000491581 DLEU1O43261 78 aa4.53□□□□□ -1.68
HDAC3-211ENST00000491581 FABP2P12104 132 aa4.53□□□□□ -1.68
HDAC3-211ENST00000491581 A0A0B4J2C4 111 aa4.52□□□□□ -1.69
HDAC3-211ENST00000491581 TRIAP1O43715 76 aa4.52□□□□□ -1.69
HDAC3-211ENST00000491581 C20orf166-AS1Q96NR2 134 aa4.52□□□□□ -1.69
HDAC3-211ENST00000491581 TEN1Q86WV5 123 aa4.51□□□□□ -1.69
HDAC3-211ENST00000491581 CEND1Q8N111 149 aa4.51□□□□□ -1.69
HDAC3-211ENST00000491581 PPDPFLQ8WWR9 84 aa4.51□□□□□ -1.69
HDAC3-211ENST00000491581 S100A1P23297 94 aa4.5□□□□□ -1.69
HDAC3-211ENST00000491581 SIGMAR1Q99720 223 aa4.5□□□□□ -1.69
HDAC3-211ENST00000491581 HIGD1BQ9P298 99 aa4.5□□□□□ -1.69
HDAC3-211ENST00000491581 VAMP8Q9BV40 100 aa4.49□□□□□ -1.69
HDAC3-211ENST00000491581 PRO1854Q9UHT4 67 aa4.49□□□□□ -1.69
HDAC3-211ENST00000491581 H0YGX0 51 aa4.48□□□□□ -1.69
HDAC3-211ENST00000491581 MT2AP02795 61 aa4.48□□□□□ -1.69
HDAC3-211ENST00000491581 USH2AO75445 5202 aa4.48□□□□□ -1.69
HDAC3-211ENST00000491581 IGKV4-1P06312 121 aa4.47□□□□□ -1.69
HDAC3-211ENST00000491581 SS18L2Q9UHA2 77 aa4.47□□□□□ -1.69
HDAC3-211ENST00000491581 SSPOA2VEC9 5147 aa4.46□□□□□ -1.7
HDAC3-211ENST00000491581 MT1FP04733 61 aa4.46□□□□□ -1.7
HDAC3-211ENST00000491581 HRES1P13985 223 aa4.45□□□□□ -1.7
HDAC3-211ENST00000491581 PYY3Q5JQD4 70 aa4.45□□□□□ -1.7
HDAC3-211ENST00000491581 LINC00313P59037 77 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms