RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 ELOF1P60002 83 aaKnown RBP5.48□□□□□ -1.53
HPS4-215ENST00000491142 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
HPS4-215ENST00000491142 TRBV7-7A0A0K0K1E9 115 aa5.47□□□□□ -1.53
HPS4-215ENST00000491142 ZNF73O43830 326 aaPredicted RBP5.47□□□□□ -1.53
HPS4-215ENST00000491142 COX7BP24311 80 aa5.47□□□□□ -1.53
HPS4-215ENST00000491142 LINC00643Q86TS7 51 aa5.47□□□□□ -1.53
HPS4-215ENST00000491142 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
HPS4-215ENST00000491142 RPL37AP61513 92 aaKnown RBP5.46□□□□□ -1.54
HPS4-215ENST00000491142 GAGE2BQ13066 116 aa5.46□□□□□ -1.54
HPS4-215ENST00000491142 GAGE2EQ4V326 116 aa5.46□□□□□ -1.54
HPS4-215ENST00000491142 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.46□□□□□ -1.54
HPS4-215ENST00000491142 IMUPQ9GZP8 106 aa5.46□□□□□ -1.54
HPS4-215ENST00000491142 C14orf132Q9NPU4 83 aa5.46□□□□□ -1.54
HPS4-215ENST00000491142 GAGE2DQ9UEU5 116 aa5.46□□□□□ -1.54
HPS4-215ENST00000491142 CCKP06307 115 aa5.45□□□□□ -1.54
HPS4-215ENST00000491142 GAGE2AQ6NT46 116 aa5.45□□□□□ -1.54
HPS4-215ENST00000491142 SMCR5Q8TEV8 140 aa5.45□□□□□ -1.54
HPS4-215ENST00000491142 LOC107984640A0A0U1RRK4 108 aa5.44□□□□□ -1.54
HPS4-215ENST00000491142 NKAPP1Q8N9T2 125 aa5.44□□□□□ -1.54
HPS4-215ENST00000491142 KCNQ1DNQ9H478 68 aa5.44□□□□□ -1.54
HPS4-215ENST00000491142 A0A1B0GV72 72 aa5.43□□□□□ -1.54
HPS4-215ENST00000491142 LOC110117498A0A087WWA1 95 aa5.42□□□□□ -1.54
HPS4-215ENST00000491142 PRYO14603 147 aa5.42□□□□□ -1.54
HPS4-215ENST00000491142 CNBPP62633 177 aaKnown RBP5.42□□□□□ -1.54
HPS4-215ENST00000491142 Q6ZQY7 126 aa5.42□□□□□ -1.54
HPS4-215ENST00000491142 C7orf33Q8WU49 177 aa5.42□□□□□ -1.54
HPS4-215ENST00000491142 KRTAP4-11Q9BYQ6 195 aa5.42□□□□□ -1.54
HPS4-215ENST00000491142 PDE6GP18545 87 aa5.41□□□□□ -1.54
HPS4-215ENST00000491142 RBM3P98179 157 aaKnown RBP5.41□□□□□ -1.54
HPS4-215ENST00000491142 C14orf177Q52M58 125 aa5.41□□□□□ -1.54
HPS4-215ENST00000491142 Q6JHZ5 121 aa5.41□□□□□ -1.54
HPS4-215ENST00000491142 IGLV1-50A0A075B6I6 118 aa5.4□□□□□ -1.54
HPS4-215ENST00000491142 SPRR1AP35321 89 aa5.4□□□□□ -1.54
HPS4-215ENST00000491142 NDUFV3P56181 108 aaKnown RBP5.4□□□□□ -1.54
HPS4-215ENST00000491142 Q6ZQT0 140 aa5.4□□□□□ -1.54
HPS4-215ENST00000491142 LINC00846Q9NV44 126 aa5.4□□□□□ -1.54
HPS4-215ENST00000491142 LPAP08519 4548 aa5.39□□□□□ -1.55
HPS4-215ENST00000491142 KRTAP4-16G5E9R7 235 aaPredicted RBP5.39□□□□□ -1.55
HPS4-215ENST00000491142 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
HPS4-215ENST00000491142 KRTAP7-1Q8IUC3 87 aa5.39□□□□□ -1.55
HPS4-215ENST00000491142 LAMTOR3Q9UHA4 124 aa5.39□□□□□ -1.55
HPS4-215ENST00000491142 DHRS4-AS1Q9P1J3 65 aa5.38□□□□□ -1.55
HPS4-215ENST00000491142 TRBV7-4A0A0J9YYF1 115 aa5.37□□□□□ -1.55
HPS4-215ENST00000491142 FAM168BA1KXE4 195 aa5.37□□□□□ -1.55
HPS4-215ENST00000491142 B5MCH6 92 aa5.37□□□□□ -1.55
HPS4-215ENST00000491142 PANO1I0J062 215 aa5.37□□□□□ -1.55
HPS4-215ENST00000491142 ATP5EP2Q5VTU8 51 aa5.37□□□□□ -1.55
HPS4-215ENST00000491142 MRPL55Q7Z7F7 128 aaKnown RBP5.37□□□□□ -1.55
HPS4-215ENST00000491142 DSCR8Q96T75 97 aa5.37□□□□□ -1.55
HPS4-215ENST00000491142 ANAPC13Q9BS18 74 aa5.37□□□□□ -1.55
HPS4-215ENST00000491142 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
HPS4-215ENST00000491142 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
HPS4-215ENST00000491142 Q6ZRX8 168 aa5.36□□□□□ -1.55
HPS4-215ENST00000491142 ETDCA0A1B0GVM5 59 aa5.35□□□□□ -1.55
HPS4-215ENST00000491142 FAM19A5Q7Z5A7 132 aaPredicted RBP5.35□□□□□ -1.55
HPS4-215ENST00000491142 A0A096LNI7 61 aa5.34□□□□□ -1.55
HPS4-215ENST00000491142 RPL37AP8A6NKH3 93 aa5.34□□□□□ -1.55
HPS4-215ENST00000491142 HIST1H4AP62805 103 aaKnown RBP5.34□□□□□ -1.55
HPS4-215ENST00000491142 C9orf163Q8N9P6 203 aa5.34□□□□□ -1.55
HPS4-215ENST00000491142 Q9BRP9 147 aa5.34□□□□□ -1.55
HPS4-215ENST00000491142 UBL5Q9BZL1 73 aa5.34□□□□□ -1.55
HPS4-215ENST00000491142 IGLV5-48A0A075B6I7 105 aa5.33□□□□□ -1.56
HPS4-215ENST00000491142 FAM236AA0A1B0GUQ0 79 aa5.33□□□□□ -1.56
HPS4-215ENST00000491142 FAM236BA0A1B0GV22 79 aa5.33□□□□□ -1.56
HPS4-215ENST00000491142 LINC01547P58512 204 aaPredicted RBP5.33□□□□□ -1.56
HPS4-215ENST00000491142 REG3GQ6UW15 175 aa5.33□□□□□ -1.56
HPS4-215ENST00000491142 Q8N377 158 aa5.33□□□□□ -1.56
HPS4-215ENST00000491142 IGKV3D-7A0A0C4DH55 119 aa5.32□□□□□ -1.56
HPS4-215ENST00000491142 MUC2Q02817 5179 aa5.32□□□□□ -1.56
HPS4-215ENST00000491142 A0A1W2PNN7 141 aa5.31□□□□□ -1.56
HPS4-215ENST00000491142 A0A1B0GW54 56 aa5.3□□□□□ -1.56
HPS4-215ENST00000491142 Q6ZVQ6 151 aa5.3□□□□□ -1.56
HPS4-215ENST00000491142 IGKV2-24A0A0C4DH68 120 aa5.29□□□□□ -1.56
HPS4-215ENST00000491142 ATOX1O00244 68 aa5.29□□□□□ -1.56
HPS4-215ENST00000491142 CXCL6P80162 114 aa5.29□□□□□ -1.56
HPS4-215ENST00000491142 DPH3Q96FX2 82 aa5.29□□□□□ -1.56
HPS4-215ENST00000491142 LINC00474Q9P2X8 69 aa5.29□□□□□ -1.56
HPS4-215ENST00000491142 H0Y9J4 135 aa5.28□□□□□ -1.56
HPS4-215ENST00000491142 CHTF8P0CG12 524 aa5.28□□□□□ -1.56
HPS4-215ENST00000491142 UBE2BP63146 152 aa5.28□□□□□ -1.56
HPS4-215ENST00000491142 ERC2-IT1O76042 136 aa5.27□□□□□ -1.57
HPS4-215ENST00000491142 KRTAP10-8P60410 259 aa5.27□□□□□ -1.57
HPS4-215ENST00000491142 DEFB105AQ8NG35 78 aa5.27□□□□□ -1.57
HPS4-215ENST00000491142 FAT4Q6V0I7 4981 aa5.27□□□□□ -1.57
HPS4-215ENST00000491142 CCDC179H3BU77 68 aa5.26□□□□□ -1.57
HPS4-215ENST00000491142 ST20-AS1Q8NBB2 130 aa5.26□□□□□ -1.57
HPS4-215ENST00000491142 SPACA4Q8TDM5 124 aa5.26□□□□□ -1.57
HPS4-215ENST00000491142 A0A087WVE0 104 aa5.25□□□□□ -1.57
HPS4-215ENST00000491142 UQCRQO14949 82 aa5.25□□□□□ -1.57
HPS4-215ENST00000491142 BCE1O60756 84 aa5.25□□□□□ -1.57
HPS4-215ENST00000491142 PHF5AQ7RTV0 110 aaKnown RBP5.25□□□□□ -1.57
HPS4-215ENST00000491142 FAM19A1Q7Z5A9 133 aa5.25□□□□□ -1.57
HPS4-215ENST00000491142 PLAC8Q9NZF1 115 aa5.25□□□□□ -1.57
HPS4-215ENST00000491142 IGLV8-61A0A075B6I0 122 aa5.24□□□□□ -1.57
HPS4-215ENST00000491142 COX7CP15954 63 aa5.24□□□□□ -1.57
HPS4-215ENST00000491142 C1orf137Q5JT78 98 aa5.24□□□□□ -1.57
HPS4-215ENST00000491142 SMIM29Q86T20 159 aa5.24□□□□□ -1.57
HPS4-215ENST00000491142 C3orf22Q8N5N4 141 aa5.24□□□□□ -1.57
HPS4-215ENST00000491142 SPRR4Q96PI1 79 aa5.24□□□□□ -1.57
HPS4-215ENST00000491142 SPRR1BP22528 89 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms