RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 NBEAL2Q6ZNJ1 2754 aa3.76□□□□□ -1.81
VPS41-214ENST00000490924 F8WEM9 126 aa3.76□□□□□ -1.81
VPS41-214ENST00000490924 HTN3P15516 51 aa3.76□□□□□ -1.81
VPS41-214ENST00000490924 ESRGQ1W209 222 aa3.76□□□□□ -1.81
VPS41-214ENST00000490924 C7orf33Q8WU49 177 aa3.76□□□□□ -1.81
VPS41-214ENST00000490924 VWFP04275 2813 aa3.75□□□□□ -1.81
VPS41-214ENST00000490924 MT3P25713 68 aa3.75□□□□□ -1.81
VPS41-214ENST00000490924 Q6ZTC4 211 aa3.75□□□□□ -1.81
VPS41-214ENST00000490924 TM2D3Q9BRN9 247 aa3.75□□□□□ -1.81
VPS41-214ENST00000490924 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
VPS41-214ENST00000490924 PKD1L1Q8TDX9 2849 aa3.74□□□□□ -1.81
VPS41-214ENST00000490924 IGKV2D-24A0A075B6R9 120 aa3.74□□□□□ -1.81
VPS41-214ENST00000490924 DEFB131BA0A096LNP1 70 aa3.74□□□□□ -1.81
VPS41-214ENST00000490924 ETDCA0A1B0GVM5 59 aa3.74□□□□□ -1.81
VPS41-214ENST00000490924 H0Y9J4 135 aa3.74□□□□□ -1.81
VPS41-214ENST00000490924 H3BPC8 53 aa3.74□□□□□ -1.81
VPS41-214ENST00000490924 NDUFB1O75438 58 aa3.74□□□□□ -1.81
VPS41-214ENST00000490924 C1orf137Q5JT78 98 aa3.74□□□□□ -1.81
VPS41-214ENST00000490924 A0A1W2PNM2 257 aa3.73□□□□□ -1.81
VPS41-214ENST00000490924 MRPL55Q7Z7F7 128 aaKnown RBP3.73□□□□□ -1.81
VPS41-214ENST00000490924 C11orf45Q8TAV5 145 aa3.73□□□□□ -1.81
VPS41-214ENST00000490924 ZCCHC13Q8WW36 166 aaKnown RBP3.73□□□□□ -1.81
VPS41-214ENST00000490924 TGP01266 2768 aa3.73□□□□□ -1.81
VPS41-214ENST00000490924 SPRR1BP22528 89 aa3.72□□□□□ -1.81
VPS41-214ENST00000490924 CNBPP62633 177 aaKnown RBP3.72□□□□□ -1.81
VPS41-214ENST00000490924 C4orf26Q17RF5 130 aa3.72□□□□□ -1.81
VPS41-214ENST00000490924 SERTAD4-AS1Q5TG53 156 aa3.72□□□□□ -1.81
VPS41-214ENST00000490924 Q9BRP9 147 aa3.72□□□□□ -1.81
VPS41-214ENST00000490924 CYP4F30PQ9H0H9 118 aa3.72□□□□□ -1.81
VPS41-214ENST00000490924 SNURFQ9Y675 71 aa3.72□□□□□ -1.81
VPS41-214ENST00000490924 RYR3Q15413 4870 aa3.71□□□□□ -1.82
VPS41-214ENST00000490924 KRTAP24-1Q3LI83 254 aa3.71□□□□□ -1.82
VPS41-214ENST00000490924 C14orf177Q52M58 125 aa3.71□□□□□ -1.82
VPS41-214ENST00000490924 REG3GQ6UW15 175 aa3.71□□□□□ -1.82
VPS41-214ENST00000490924 FP248Q71RG6 208 aaPredicted RBP3.71□□□□□ -1.82
VPS41-214ENST00000490924 MPLKIPQ8TAP9 179 aa3.71□□□□□ -1.82
VPS41-214ENST00000490924 LINC00588Q9Y4M8 146 aa3.71□□□□□ -1.82
VPS41-214ENST00000490924 KMT2CQ8NEZ4 4911 aaKnown RBP3.7□□□□□ -1.82
VPS41-214ENST00000490924 C16orf90A8MZG2 172 aa3.7□□□□□ -1.82
VPS41-214ENST00000490924 HRCT1Q6UXD1 115 aa3.7□□□□□ -1.82
VPS41-214ENST00000490924 TENM1Q9UKZ4 2725 aa3.69□□□□□ -1.82
VPS41-214ENST00000490924 HCG22E2RYF7 251 aa3.69□□□□□ -1.82
VPS41-214ENST00000490924 C3orf84H3BNL1 204 aa3.69□□□□□ -1.82
VPS41-214ENST00000490924 DSCR10P59022 87 aa3.69□□□□□ -1.82
VPS41-214ENST00000490924 RPL37AP61513 92 aaKnown RBP3.69□□□□□ -1.82
VPS41-214ENST00000490924 SCXQ7RTU7 201 aa3.69□□□□□ -1.82
VPS41-214ENST00000490924 SMIM29Q86T20 159 aa3.69□□□□□ -1.82
VPS41-214ENST00000490924 SPANXA2-OT1Q8N9U9 137 aa3.69□□□□□ -1.82
VPS41-214ENST00000490924 V9GYY9 64 aa3.69□□□□□ -1.82
VPS41-214ENST00000490924 hDV103S1A0JD37 113 aa3.68□□□□□ -1.82
VPS41-214ENST00000490924 Q1T7F1 81 aa3.68□□□□□ -1.82
VPS41-214ENST00000490924 NOTCH1P46531 2555 aa3.67□□□□□ -1.82
VPS41-214ENST00000490924 DNAH3Q8TD57 4116 aa3.67□□□□□ -1.82
VPS41-214ENST00000490924 MP68P56378 58 aa3.67□□□□□ -1.82
VPS41-214ENST00000490924 KRTAP7-1Q8IUC3 87 aa3.67□□□□□ -1.82
VPS41-214ENST00000490924 LINC00474Q9P2X8 69 aa3.67□□□□□ -1.82
VPS41-214ENST00000490924 PRKDCP78527 4128 aaKnown RBP3.66□□□□□ -1.82
VPS41-214ENST00000490924 UBE2BP63146 152 aa3.66□□□□□ -1.82
VPS41-214ENST00000490924 LINC00336Q6ZUF6 198 aa3.66□□□□□ -1.82
VPS41-214ENST00000490924 Q8N9L7 120 aa3.66□□□□□ -1.82
VPS41-214ENST00000490924 DEFB105AQ8NG35 78 aa3.66□□□□□ -1.82
VPS41-214ENST00000490924 RETNQ9HD89 108 aa3.66□□□□□ -1.82
VPS41-214ENST00000490924 TRRAPQ9Y4A5 3859 aa3.65□□□□□ -1.82
VPS41-214ENST00000490924 K7EQZ3 153 aa3.65□□□□□ -1.83
VPS41-214ENST00000490924 PSCAO43653 123 aa3.65□□□□□ -1.83
VPS41-214ENST00000490924 C1orf195Q5TG92 126 aa3.65□□□□□ -1.83
VPS41-214ENST00000490924 IGFL1Q6UW32 110 aa3.65□□□□□ -1.83
VPS41-214ENST00000490924 HIGD2AQ9BW72 106 aa3.65□□□□□ -1.83
VPS41-214ENST00000490924 DNAH1Q9P2D7 4330 aa3.64□□□□□ -1.83
VPS41-214ENST00000490924 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.64□□□□□ -1.83
VPS41-214ENST00000490924 PRR15Q8IV56 129 aa3.64□□□□□ -1.83
VPS41-214ENST00000490924 ST20-AS1Q8NBB2 130 aa3.64□□□□□ -1.83
VPS41-214ENST00000490924 MGAM2Q2M2H8 2515 aa3.64□□□□□ -1.83
VPS41-214ENST00000490924 TRAV22A0A0B4J277 110 aa3.63□□□□□ -1.83
VPS41-214ENST00000490924 FAM168BA1KXE4 195 aa3.63□□□□□ -1.83
VPS41-214ENST00000490924 A8MWP4 228 aa3.63□□□□□ -1.83
VPS41-214ENST00000490924 TP53AIP1Q9HCN2 124 aa3.63□□□□□ -1.83
VPS41-214ENST00000490924 ASB16-AS1Q495Z4 193 aa3.62□□□□□ -1.83
VPS41-214ENST00000490924 C1orf64Q8NEQ6 169 aa3.62□□□□□ -1.83
VPS41-214ENST00000490924 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
VPS41-214ENST00000490924 A0A087WSZ3 146 aa3.61□□□□□ -1.83
VPS41-214ENST00000490924 UBE2AP49459 152 aa3.61□□□□□ -1.83
VPS41-214ENST00000490924 C9orf163Q8N9P6 203 aa3.61□□□□□ -1.83
VPS41-214ENST00000490924 B9D2Q9BPU9 175 aa3.61□□□□□ -1.83
VPS41-214ENST00000490924 A0A096LNI7 61 aa3.6□□□□□ -1.83
VPS41-214ENST00000490924 MOBPQ13875 183 aa3.6□□□□□ -1.83
VPS41-214ENST00000490924 CASC10Q5T4H9 136 aa3.6□□□□□ -1.83
VPS41-214ENST00000490924 KRTAP13-1Q8IUC0 172 aa3.6□□□□□ -1.83
VPS41-214ENST00000490924 LIMD2Q9BT23 127 aa3.6□□□□□ -1.83
VPS41-214ENST00000490924 TENM3Q9P273 2699 aa3.6□□□□□ -1.83
VPS41-214ENST00000490924 FAM229BQ4G0N7 80 aa3.59□□□□□ -1.83
VPS41-214ENST00000490924 LINC00483Q53H64 154 aa3.59□□□□□ -1.83
VPS41-214ENST00000490924 CASC2Q6XLA1 102 aa3.59□□□□□ -1.83
VPS41-214ENST00000490924 ZNF706Q9Y5V0 76 aaPredicted RBP3.59□□□□□ -1.83
VPS41-214ENST00000490924 BIRC6Q9NR09 4857 aa3.58□□□□□ -1.84
VPS41-214ENST00000490924 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
VPS41-214ENST00000490924 EPPK1P58107 5090 aaKnown RBP3.58□□□□□ -1.84
VPS41-214ENST00000490924 IGLV7-46A0A075B6I9 117 aa3.57□□□□□ -1.84
VPS41-214ENST00000490924 H0Y9P7 68 aa3.57□□□□□ -1.84
VPS41-214ENST00000490924 PRLHP81277 87 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms