RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 HAMPP81172 84 aa2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 C1orf195Q5TG92 126 aa2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 Q6ZQY7 126 aa2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 Q6ZRU5 148 aa2.26□□□□□ -2.05
CRNKL1-203ENST00000490258 DNAH9Q9NYC9 4486 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 RYR1P21817 5038 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 PRKDCP78527 4128 aaKnown RBP2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 TRGV4A0A0C4DH28 118 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 IGKV3OR2-268A0A0C4DH90 116 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 A0A1B0GVY2 172 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 HTN3P15516 51 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 FUSP35637 526 aaKnown RBP eCLIP2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 CD164Q04900 197 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 Q1T7F1 81 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 FAM229BQ4G0N7 80 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 C11orf45Q8TAV5 145 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 CHCHD10Q8WYQ3 142 aaPredicted RBP2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 DIRC1Q969H9 104 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 C11orf68Q9H3H3 251 aaKnown RBP2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 TENM3Q9P273 2699 aa2.25□□□□□ -2.05
CRNKL1-203ENST00000490258 EPPK1P58107 5090 aaKnown RBP2.24□□□□□ -2.05
CRNKL1-203ENST00000490258 IGLV5-48A0A075B6I7 105 aa2.24□□□□□ -2.05
CRNKL1-203ENST00000490258 ZNF73O43830 326 aaPredicted RBP2.24□□□□□ -2.05
CRNKL1-203ENST00000490258 SPAG11BQ08648 103 aa2.24□□□□□ -2.05
CRNKL1-203ENST00000490258 KRTAP7-1Q8IUC3 87 aa2.24□□□□□ -2.05
CRNKL1-203ENST00000490258 BRK1Q8WUW1 75 aa2.24□□□□□ -2.05
CRNKL1-203ENST00000490258 CYP4F30PQ9H0H9 118 aa2.24□□□□□ -2.05
CRNKL1-203ENST00000490258 PRR34Q9NV39 138 aa2.24□□□□□ -2.05
CRNKL1-203ENST00000490258 PKIGQ9Y2B9 76 aa2.24□□□□□ -2.05
CRNKL1-203ENST00000490258 STARD9Q9P2P6 4700 aa2.23□□□□□ -2.05
CRNKL1-203ENST00000490258 HYDINQ4G0P3 5121 aa2.23□□□□□ -2.05
CRNKL1-203ENST00000490258 REG3AQ06141 175 aa2.23□□□□□ -2.05
CRNKL1-203ENST00000490258 KRTAP13-3Q3SY46 172 aa2.23□□□□□ -2.05
CRNKL1-203ENST00000490258 PRO0255Q9UI72 69 aa2.23□□□□□ -2.05
CRNKL1-203ENST00000490258 UBR4Q5T4S7 5183 aa2.23□□□□□ -2.05
CRNKL1-203ENST00000490258 TGP01266 2768 aa2.23□□□□□ -2.05
CRNKL1-203ENST00000490258 EGFEM1PQ0D2K5 195 aa2.22□□□□□ -2.05
CRNKL1-203ENST00000490258 C9orf116Q5BN46 136 aaPredicted RBP2.22□□□□□ -2.05
CRNKL1-203ENST00000490258 LCE3CQ5T5A8 94 aa2.22□□□□□ -2.05
CRNKL1-203ENST00000490258 CLPSL2Q6UWE3 100 aa2.22□□□□□ -2.05
CRNKL1-203ENST00000490258 UNQ6190/PRO20217Q6UXQ8 127 aa2.22□□□□□ -2.05
CRNKL1-203ENST00000490258 Q6ZRP5 223 aa2.22□□□□□ -2.05
CRNKL1-203ENST00000490258 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
CRNKL1-203ENST00000490258 LINC00269Q8N2A0 174 aa2.22□□□□□ -2.05
CRNKL1-203ENST00000490258 M0R378 163 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 DEFB130BP0DP73 79 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 DEFB130AP0DP74 79 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 PMAIP1Q13794 54 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 LELP1Q5T871 98 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 SCXQ7RTU7 201 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 Q8N9L7 120 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 Q8NAQ8 132 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 HIGD2AQ9BW72 106 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 C6orf48Q9UBA6 75 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 ALMS1Q8TCU4 4167 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 LYSTQ99698 3801 aa2.21□□□□□ -2.06
CRNKL1-203ENST00000490258 TRAV22A0A0B4J277 110 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 ETDCA0A1B0GVM5 59 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 A0A1W2PNM2 257 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 APOC4P55056 127 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 DAD1P61803 113 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 KRTAP26-1Q6PEX3 210 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 MRPL55Q7Z7F7 128 aaKnown RBP2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 Q8NBF4 154 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 C1orf64Q8NEQ6 169 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 PRAC1Q96KF2 57 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 SPRR4Q96PI1 79 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 KCNQ1DNQ9H478 68 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 HERC2O95714 4834 aa2.2□□□□□ -2.06
CRNKL1-203ENST00000490258 DNAH7Q8WXX0 4024 aa2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 KRTAP4-16G5E9R7 235 aaPredicted RBP2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 PSCAO43653 123 aa2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 NDUFB1O75438 58 aa2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 ANGP03950 147 aaKnown RBP2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 SPRR1AP35321 89 aa2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 DSCR10P59022 87 aa2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 HIGD2BQ4VC39 106 aa2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 KPRPQ5T749 579 aaPredicted RBP2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 NOTCH2NLQ7Z3S9 236 aa2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 SPANXA2-OT1Q8N9U9 137 aa2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 Q9BRP9 147 aa2.19□□□□□ -2.06
CRNKL1-203ENST00000490258 IGLV10-54A0A075B6I4 117 aa2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 H3BPC8 53 aa2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 Q5VV11 94 aa2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 Q8N377 158 aa2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 XAGE1AQ9HD64 81 aa2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 DHRS4-AS1Q9P1J3 65 aa2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 KLK12Q9UKR0 248 aa2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 DNAH10Q8IVF4 4471 aa2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 DNAH1Q9P2D7 4330 aa2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 COL7A1Q02388 2944 aa2.18□□□□□ -2.06
CRNKL1-203ENST00000490258 DYNC2H1Q8NCM8 4307 aaKnown RBP2.17□□□□□ -2.06
CRNKL1-203ENST00000490258 IGLV8-61A0A075B6I0 122 aa2.17□□□□□ -2.06
CRNKL1-203ENST00000490258 LOC101927531A0A1B0GV80 90 aa2.17□□□□□ -2.06
CRNKL1-203ENST00000490258 HCG22E2RYF7 251 aa2.17□□□□□ -2.06
CRNKL1-203ENST00000490258 H3BNG1 76 aa2.17□□□□□ -2.06
CRNKL1-203ENST00000490258 TLX1NBP0CAT3 122 aa2.17□□□□□ -2.06
CRNKL1-203ENST00000490258 SYCNQ0VAF6 134 aa2.17□□□□□ -2.06
CRNKL1-203ENST00000490258 CASC10Q5T4H9 136 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms