RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 KRTAP4-16G5E9R7 235 aaPredicted RBP4.82□□□□□ -1.64
SMC6-209ENST00000489535 BAALC-AS2P0C853 105 aa4.82□□□□□ -1.64
SMC6-209ENST00000489535 ETDBQ3ZM63 59 aa4.82□□□□□ -1.64
SMC6-209ENST00000489535 FAM19A1Q7Z5A9 133 aa4.82□□□□□ -1.64
SMC6-209ENST00000489535 KRTAP11-1Q8IUC1 163 aa4.82□□□□□ -1.64
SMC6-209ENST00000489535 PLAC8Q9NZF1 115 aa4.82□□□□□ -1.64
SMC6-209ENST00000489535 ORMDL1Q9P0S3 153 aa4.82□□□□□ -1.64
SMC6-209ENST00000489535 PCP4P48539 62 aa4.81□□□□□ -1.64
SMC6-209ENST00000489535 KRTAP10-1P60331 282 aa4.81□□□□□ -1.64
SMC6-209ENST00000489535 Q6ZRX8 168 aa4.81□□□□□ -1.64
SMC6-209ENST00000489535 LINC01600Q96MT4 127 aa4.81□□□□□ -1.64
SMC6-209ENST00000489535 INAFM2P0DMQ5 153 aa4.8□□□□□ -1.64
SMC6-209ENST00000489535 Q6ZQY7 126 aa4.8□□□□□ -1.64
SMC6-209ENST00000489535 TEN1Q86WV5 123 aa4.8□□□□□ -1.64
SMC6-209ENST00000489535 Q9BRP9 147 aa4.8□□□□□ -1.64
SMC6-209ENST00000489535 DHRS4-AS1Q9P1J3 65 aa4.8□□□□□ -1.64
SMC6-209ENST00000489535 PRLHP81277 87 aa4.79□□□□□ -1.64
SMC6-209ENST00000489535 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.79□□□□□ -1.64
SMC6-209ENST00000489535 DYNC1H1Q14204 4646 aaKnown RBP4.79□□□□□ -1.64
SMC6-209ENST00000489535 A0A1B0GVY2 172 aa4.78□□□□□ -1.64
SMC6-209ENST00000489535 TMEM256-PLSCR3K7ERE1 68 aa4.78□□□□□ -1.64
SMC6-209ENST00000489535 UBE2AP49459 152 aa4.78□□□□□ -1.64
SMC6-209ENST00000489535 OCIAD2Q56VL3 154 aa4.78□□□□□ -1.64
SMC6-209ENST00000489535 Q6ZSA8 131 aa4.78□□□□□ -1.64
SMC6-209ENST00000489535 RYR3Q15413 4870 aa4.78□□□□□ -1.64
SMC6-209ENST00000489535 PKHD1P08F94 4074 aa4.77□□□□□ -1.65
SMC6-209ENST00000489535 H3BQ85 93 aa4.77□□□□□ -1.65
SMC6-209ENST00000489535 BCE1O60756 84 aa4.77□□□□□ -1.65
SMC6-209ENST00000489535 HAMPP81172 84 aa4.77□□□□□ -1.65
SMC6-209ENST00000489535 SCXQ7RTU7 201 aa4.77□□□□□ -1.65
SMC6-209ENST00000489535 CIRBP-AS1Q8TBR5 109 aa4.77□□□□□ -1.65
SMC6-209ENST00000489535 SMCR5Q8TEV8 140 aa4.77□□□□□ -1.65
SMC6-209ENST00000489535 PPDPFLQ8WWR9 84 aa4.77□□□□□ -1.65
SMC6-209ENST00000489535 LRP1BQ9NZR2 4599 aa4.77□□□□□ -1.65
SMC6-209ENST00000489535 TEX49A0A1B0GTD5 131 aa4.76□□□□□ -1.65
SMC6-209ENST00000489535 A0A1B0GV72 72 aa4.76□□□□□ -1.65
SMC6-209ENST00000489535 ERC2-IT1O76042 136 aa4.76□□□□□ -1.65
SMC6-209ENST00000489535 HIGD2AQ9BW72 106 aa4.76□□□□□ -1.65
SMC6-209ENST00000489535 PSORS1C2Q9UIG4 136 aa4.76□□□□□ -1.65
SMC6-209ENST00000489535 H0Y9J4 135 aa4.75□□□□□ -1.65
SMC6-209ENST00000489535 C1orf137Q5JT78 98 aa4.75□□□□□ -1.65
SMC6-209ENST00000489535 ST20-AS1Q8NBB2 130 aa4.75□□□□□ -1.65
SMC6-209ENST00000489535 DEFB105AQ8NG35 78 aa4.75□□□□□ -1.65
SMC6-209ENST00000489535 LAMTOR3Q9UHA4 124 aa4.75□□□□□ -1.65
SMC6-209ENST00000489535 K7ERU9 68 aa4.74□□□□□ -1.65
SMC6-209ENST00000489535 LINC01547P58512 204 aaPredicted RBP4.74□□□□□ -1.65
SMC6-209ENST00000489535 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
SMC6-209ENST00000489535 APOBP04114 4563 aaKnown RBP4.74□□□□□ -1.65
SMC6-209ENST00000489535 JMJD7-PLA2G4BH0Y9G9 81 aa4.73□□□□□ -1.65
SMC6-209ENST00000489535 J3QR89 54 aa4.73□□□□□ -1.65
SMC6-209ENST00000489535 KRTAP13-1Q8IUC0 172 aa4.73□□□□□ -1.65
SMC6-209ENST00000489535 Q8N377 158 aa4.73□□□□□ -1.65
SMC6-209ENST00000489535 C14orf132Q9NPU4 83 aa4.73□□□□□ -1.65
SMC6-209ENST00000489535 IGLV5-48A0A075B6I7 105 aa4.72□□□□□ -1.65
SMC6-209ENST00000489535 NDUFV3P56181 108 aaKnown RBP4.72□□□□□ -1.65
SMC6-209ENST00000489535 OBSCN-AS1Q96MR7 158 aa4.72□□□□□ -1.65
SMC6-209ENST00000489535 PKHD1L1Q86WI1 4243 aa4.71□□□□□ -1.66
SMC6-209ENST00000489535 VPS13BQ7Z7G8 4022 aa4.71□□□□□ -1.66
SMC6-209ENST00000489535 IGLV7-43P04211 117 aa4.71□□□□□ -1.66
SMC6-209ENST00000489535 RBM3P98179 157 aaKnown RBP4.71□□□□□ -1.66
SMC6-209ENST00000489535 C3orf22Q8N5N4 141 aa4.71□□□□□ -1.66
SMC6-209ENST00000489535 ZNF861PO60384 105 aa4.7□□□□□ -1.66
SMC6-209ENST00000489535 GAGE2AQ6NT46 116 aa4.69□□□□□ -1.66
SMC6-209ENST00000489535 DSCR8Q96T75 97 aa4.69□□□□□ -1.66
SMC6-209ENST00000489535 VPS25Q9BRG1 176 aa4.69□□□□□ -1.66
SMC6-209ENST00000489535 F8WEM9 126 aa4.68□□□□□ -1.66
SMC6-209ENST00000489535 SPRR1BP22528 89 aa4.68□□□□□ -1.66
SMC6-209ENST00000489535 XGP55808 180 aa4.68□□□□□ -1.66
SMC6-209ENST00000489535 SMIM29Q86T20 159 aa4.68□□□□□ -1.66
SMC6-209ENST00000489535 ZNF706Q9Y5V0 76 aaPredicted RBP4.68□□□□□ -1.66
SMC6-209ENST00000489535 LOC110117498A0A087WWA1 95 aa4.67□□□□□ -1.66
SMC6-209ENST00000489535 CCKP06307 115 aa4.67□□□□□ -1.66
SMC6-209ENST00000489535 Q6ZQT0 140 aa4.67□□□□□ -1.66
SMC6-209ENST00000489535 SPRR4Q96PI1 79 aa4.67□□□□□ -1.66
SMC6-209ENST00000489535 TRBV7-4A0A0J9YYF1 115 aa4.66□□□□□ -1.66
SMC6-209ENST00000489535 RPL37AP61513 92 aaKnown RBP4.66□□□□□ -1.66
SMC6-209ENST00000489535 FAM240AA0A1B0GVK7 77 aa4.65□□□□□ -1.67
SMC6-209ENST00000489535 SMR3BP02814 79 aaPredicted RBP4.65□□□□□ -1.67
SMC6-209ENST00000489535 ACYP1P07311 99 aa4.65□□□□□ -1.67
SMC6-209ENST00000489535 SCGB1A1P11684 91 aa4.65□□□□□ -1.67
SMC6-209ENST00000489535 PDE6GP18545 87 aa4.65□□□□□ -1.67
SMC6-209ENST00000489535 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.67
SMC6-209ENST00000489535 LINC00483Q53H64 154 aa4.64□□□□□ -1.67
SMC6-209ENST00000489535 IGLV8-61A0A075B6I0 122 aa4.63□□□□□ -1.67
SMC6-209ENST00000489535 IGLV9-49A0A0B4J1Y8 123 aa4.63□□□□□ -1.67
SMC6-209ENST00000489535 C9orf153Q5TBE3 101 aa4.63□□□□□ -1.67
SMC6-209ENST00000489535 MPLKIPQ8TAP9 179 aa4.63□□□□□ -1.67
SMC6-209ENST00000489535 RYR1P21817 5038 aa4.63□□□□□ -1.67
SMC6-209ENST00000489535 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
SMC6-209ENST00000489535 IGFL1Q6UW32 110 aa4.62□□□□□ -1.67
SMC6-209ENST00000489535 ANAPC11Q9NYG5 84 aa4.62□□□□□ -1.67
SMC6-209ENST00000489535 A0A0G2JQZ4 141 aa4.61□□□□□ -1.67
SMC6-209ENST00000489535 A0A1W2PNM2 257 aa4.61□□□□□ -1.67
SMC6-209ENST00000489535 LINC00846Q9NV44 126 aa4.61□□□□□ -1.67
SMC6-209ENST00000489535 HSPG2P98160 4391 aa4.6□□□□□ -1.67
SMC6-209ENST00000489535 EPPK1P58107 5090 aaKnown RBP4.6□□□□□ -1.67
SMC6-209ENST00000489535 MOBPQ13875 183 aa4.6□□□□□ -1.67
SMC6-209ENST00000489535 Q6JHZ5 121 aa4.6□□□□□ -1.67
SMC6-209ENST00000489535 SPINK6Q6UWN8 80 aa4.6□□□□□ -1.67
SMC6-209ENST00000489535 Q8NBF4 154 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 329.4 ms