RNA–Protein interactions for RNA: ENST00000488848.1

USP11-209, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 904 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-209ENST00000488848 Q8N377 158 aa6.47□□□□□ -1.37
USP11-209ENST00000488848 SPRR4Q96PI1 79 aa6.47□□□□□ -1.37
USP11-209ENST00000488848 IGLV8-61A0A075B6I0 122 aa6.45□□□□□ -1.38
USP11-209ENST00000488848 SPINK6Q6UWN8 80 aa6.45□□□□□ -1.38
USP11-209ENST00000488848 SMIM29Q86T20 159 aa6.45□□□□□ -1.38
USP11-209ENST00000488848 TEN1Q86WV5 123 aa6.45□□□□□ -1.38
USP11-209ENST00000488848 C21orf62-AS1Q17RA5 79 aa6.44□□□□□ -1.38
USP11-209ENST00000488848 ST20-AS1Q8NBB2 130 aa6.44□□□□□ -1.38
USP11-209ENST00000488848 JMJD7-PLA2G4BH0Y9G9 81 aa6.43□□□□□ -1.38
USP11-209ENST00000488848 J3QL48 77 aa6.43□□□□□ -1.38
USP11-209ENST00000488848 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
USP11-209ENST00000488848 FAM229BQ4G0N7 80 aa6.43□□□□□ -1.38
USP11-209ENST00000488848 C4orf48Q5BLP8 95 aa6.42□□□□□ -1.38
USP11-209ENST00000488848 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
USP11-209ENST00000488848 FAM229AH3BQW9 127 aa6.41□□□□□ -1.38
USP11-209ENST00000488848 SMR3BP02814 79 aaPredicted RBP6.41□□□□□ -1.38
USP11-209ENST00000488848 KRTAP1-4P0C5Y4 121 aa6.41□□□□□ -1.38
USP11-209ENST00000488848 NDUFV3P56181 108 aaKnown RBP6.41□□□□□ -1.38
USP11-209ENST00000488848 Q8N1X5 172 aa6.41□□□□□ -1.38
USP11-209ENST00000488848 MTURNQ8N3F0 131 aa6.41□□□□□ -1.38
USP11-209ENST00000488848 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
USP11-209ENST00000488848 LOC110117498A0A087WWA1 95 aa6.39□□□□□ -1.39
USP11-209ENST00000488848 TRBV7-4A0A0J9YYF1 115 aa6.39□□□□□ -1.39
USP11-209ENST00000488848 PDE6GP18545 87 aa6.39□□□□□ -1.39
USP11-209ENST00000488848 ETDBQ3ZM63 59 aa6.39□□□□□ -1.39
USP11-209ENST00000488848 Q5VSD8 79 aa6.39□□□□□ -1.39
USP11-209ENST00000488848 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
USP11-209ENST00000488848 TNXBP22105 4242 aa6.38□□□□□ -1.39
USP11-209ENST00000488848 HERC1Q15751 4861 aa6.38□□□□□ -1.39
USP11-209ENST00000488848 RBM3P98179 157 aaKnown RBP6.37□□□□□ -1.39
USP11-209ENST00000488848 GAGE2AQ6NT46 116 aa6.37□□□□□ -1.39
USP11-209ENST00000488848 LAMTOR3Q9UHA4 124 aa6.37□□□□□ -1.39
USP11-209ENST00000488848 LRP1Q07954 4544 aaKnown RBP6.37□□□□□ -1.39
USP11-209ENST00000488848 A0A1B0GW54 56 aa6.36□□□□□ -1.39
USP11-209ENST00000488848 Q6JHZ5 121 aa6.36□□□□□ -1.39
USP11-209ENST00000488848 Q6Q795 121 aa6.35□□□□□ -1.39
USP11-209ENST00000488848 DEFB105AQ8NG35 78 aa6.35□□□□□ -1.39
USP11-209ENST00000488848 F8WEM9 126 aa6.34□□□□□ -1.39
USP11-209ENST00000488848 Q6ZQT0 140 aa6.34□□□□□ -1.39
USP11-209ENST00000488848 C3orf22Q8N5N4 141 aa6.34□□□□□ -1.39
USP11-209ENST00000488848 Q8NBF4 154 aa6.34□□□□□ -1.39
USP11-209ENST00000488848 FAM240AA0A1B0GVK7 77 aa6.33□□□□□ -1.4
USP11-209ENST00000488848 SSBP3-AS1Q7Z2R9 100 aa6.33□□□□□ -1.4
USP11-209ENST00000488848 CRYGAP11844 174 aa6.32□□□□□ -1.4
USP11-209ENST00000488848 DSCR8Q96T75 97 aa6.32□□□□□ -1.4
USP11-209ENST00000488848 A0A087X002 238 aa6.31□□□□□ -1.4
USP11-209ENST00000488848 LCE2BO14633 110 aa6.31□□□□□ -1.4
USP11-209ENST00000488848 KRTAP13-2Q52LG2 175 aa6.31□□□□□ -1.4
USP11-209ENST00000488848 C14orf132Q9NPU4 83 aa6.31□□□□□ -1.4
USP11-209ENST00000488848 FLG2Q5D862 2391 aaPredicted RBP6.31□□□□□ -1.4
USP11-209ENST00000488848 CCKP06307 115 aa6.3□□□□□ -1.4
USP11-209ENST00000488848 CD164Q04900 197 aa6.3□□□□□ -1.4
USP11-209ENST00000488848 IGFL1Q6UW32 110 aa6.3□□□□□ -1.4
USP11-209ENST00000488848 J3QR89 54 aa6.29□□□□□ -1.4
USP11-209ENST00000488848 A0A1W2PNM2 257 aa6.28□□□□□ -1.4
USP11-209ENST00000488848 ACYP1P07311 99 aa6.28□□□□□ -1.4
USP11-209ENST00000488848 ANAPC11Q9NYG5 84 aa6.28□□□□□ -1.4
USP11-209ENST00000488848 K7ERU9 68 aa6.27□□□□□ -1.41
USP11-209ENST00000488848 MOBPQ13875 183 aa6.27□□□□□ -1.41
USP11-209ENST00000488848 Q5XG85 94 aa6.27□□□□□ -1.41
USP11-209ENST00000488848 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
USP11-209ENST00000488848 IGLV9-49A0A0B4J1Y8 123 aa6.25□□□□□ -1.41
USP11-209ENST00000488848 C9orf153Q5TBE3 101 aa6.25□□□□□ -1.41
USP11-209ENST00000488848 TRBV7-7A0A0K0K1E9 115 aa6.24□□□□□ -1.41
USP11-209ENST00000488848 KRTAP10-8P60410 259 aa6.24□□□□□ -1.41
USP11-209ENST00000488848 OXTP01178 125 aa6.23□□□□□ -1.41
USP11-209ENST00000488848 ASB16-AS1Q495Z4 193 aa6.22□□□□□ -1.41
USP11-209ENST00000488848 SPAG11AQ6PDA7 123 aa6.22□□□□□ -1.41
USP11-209ENST00000488848 PRR26Q8N8Z3 221 aa6.22□□□□□ -1.41
USP11-209ENST00000488848 TYMSOSQ8TAI1 123 aa6.22□□□□□ -1.41
USP11-209ENST00000488848 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
USP11-209ENST00000488848 A0A1B0GV72 72 aa6.21□□□□□ -1.42
USP11-209ENST00000488848 SPINK1P00995 79 aa6.2□□□□□ -1.42
USP11-209ENST00000488848 SS18L2Q9UHA2 77 aa6.2□□□□□ -1.42
USP11-209ENST00000488848 MT1HL1P0DM35 61 aa6.19□□□□□ -1.42
USP11-209ENST00000488848 LINC00846Q9NV44 126 aa6.19□□□□□ -1.42
USP11-209ENST00000488848 DMBT1Q9UGM3 2413 aaPredicted RBP6.19□□□□□ -1.42
USP11-209ENST00000488848 A0A0G2JQZ4 141 aa6.18□□□□□ -1.42
USP11-209ENST00000488848 KRTAP29-1A8MX34 341 aaPredicted RBP6.18□□□□□ -1.42
USP11-209ENST00000488848 LINC00304Q8N9R0 145 aa6.18□□□□□ -1.42
USP11-209ENST00000488848 CDIP1Q9H305 208 aa6.17□□□□□ -1.42
USP11-209ENST00000488848 A0A087WSZ3 146 aa6.16□□□□□ -1.42
USP11-209ENST00000488848 LIMD2Q9BT23 127 aa6.16□□□□□ -1.42
USP11-209ENST00000488848 ATP5EP2Q5VTU8 51 aa6.15□□□□□ -1.42
USP11-209ENST00000488848 Q6ZVQ6 151 aa6.15□□□□□ -1.42
USP11-209ENST00000488848 VPS25Q9BRG1 176 aa6.15□□□□□ -1.42
USP11-209ENST00000488848 UBL5Q9BZL1 73 aa6.15□□□□□ -1.42
USP11-209ENST00000488848 LINC00472Q9H8W2 130 aa6.15□□□□□ -1.42
USP11-209ENST00000488848 LINC00643Q86TS7 51 aa6.14□□□□□ -1.43
USP11-209ENST00000488848 Q96NJ1 140 aa6.14□□□□□ -1.43
USP11-209ENST00000488848 CXCL6P80162 114 aa6.12□□□□□ -1.43
USP11-209ENST00000488848 NREPQ16612 68 aa6.12□□□□□ -1.43
USP11-209ENST00000488848 J3KT08 172 aa6.11□□□□□ -1.43
USP11-209ENST00000488848 C1orf195Q5TG92 126 aa6.08□□□□□ -1.44
USP11-209ENST00000488848 HRCT1Q6UXD1 115 aa6.08□□□□□ -1.44
USP11-209ENST00000488848 KRTAP9-6A0A140TA67 174 aa6.06□□□□□ -1.44
USP11-209ENST00000488848 SIGMAR1Q99720 223 aa6.06□□□□□ -1.44
USP11-209ENST00000488848 IMUPQ9GZP8 106 aa6.06□□□□□ -1.44
USP11-209ENST00000488848 BPY2O14599 106 aa6.05□□□□□ -1.44
USP11-209ENST00000488848 DSCR10P59022 87 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms