RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 PKHD1P08F94 4074 aa3.79□□□□□ -1.8
VAMP3-203ENST00000487194 ZNF861PO60384 105 aa3.79□□□□□ -1.8
VAMP3-203ENST00000487194 CCKP06307 115 aa3.79□□□□□ -1.8
VAMP3-203ENST00000487194 SPRR1BP22528 89 aa3.79□□□□□ -1.8
VAMP3-203ENST00000487194 GAGE2AQ6NT46 116 aa3.79□□□□□ -1.8
VAMP3-203ENST00000487194 ST20-AS1Q8NBB2 130 aa3.79□□□□□ -1.8
VAMP3-203ENST00000487194 TRBV7-4A0A0J9YYF1 115 aa3.78□□□□□ -1.8
VAMP3-203ENST00000487194 A0A1B0GV72 72 aa3.78□□□□□ -1.8
VAMP3-203ENST00000487194 F8WEM9 126 aa3.78□□□□□ -1.8
VAMP3-203ENST00000487194 IGLV7-43P04211 117 aa3.78□□□□□ -1.8
VAMP3-203ENST00000487194 Q6ZQT0 140 aa3.78□□□□□ -1.8
VAMP3-203ENST00000487194 A0A1B0GW54 56 aa3.76□□□□□ -1.81
VAMP3-203ENST00000487194 SMIM29Q86T20 159 aa3.76□□□□□ -1.81
VAMP3-203ENST00000487194 SPRR4Q96PI1 79 aa3.76□□□□□ -1.81
VAMP3-203ENST00000487194 CDIP1Q9H305 208 aa3.76□□□□□ -1.81
VAMP3-203ENST00000487194 FAT1Q14517 4588 aa3.76□□□□□ -1.81
VAMP3-203ENST00000487194 IGLV8-61A0A075B6I0 122 aa3.75□□□□□ -1.81
VAMP3-203ENST00000487194 LINC00483Q53H64 154 aa3.75□□□□□ -1.81
VAMP3-203ENST00000487194 Q6JHZ5 121 aa3.75□□□□□ -1.81
VAMP3-203ENST00000487194 C3orf22Q8N5N4 141 aa3.75□□□□□ -1.81
VAMP3-203ENST00000487194 SIGMAR1Q99720 223 aa3.75□□□□□ -1.81
VAMP3-203ENST00000487194 RPL37AP61513 92 aaKnown RBP3.74□□□□□ -1.81
VAMP3-203ENST00000487194 LINC00643Q86TS7 51 aa3.74□□□□□ -1.81
VAMP3-203ENST00000487194 UBL5Q9BZL1 73 aa3.74□□□□□ -1.81
VAMP3-203ENST00000487194 VPS13BQ7Z7G8 4022 aa3.73□□□□□ -1.81
VAMP3-203ENST00000487194 HAMPP81172 84 aa3.73□□□□□ -1.81
VAMP3-203ENST00000487194 Q8NBF4 154 aa3.73□□□□□ -1.81
VAMP3-203ENST00000487194 LINC00846Q9NV44 126 aa3.73□□□□□ -1.81
VAMP3-203ENST00000487194 XGP55808 180 aa3.72□□□□□ -1.81
VAMP3-203ENST00000487194 A0A1W2PNM2 257 aa3.71□□□□□ -1.82
VAMP3-203ENST00000487194 CRYGAP11844 174 aa3.71□□□□□ -1.82
VAMP3-203ENST00000487194 C9orf153Q5TBE3 101 aa3.71□□□□□ -1.82
VAMP3-203ENST00000487194 ATP5EP2Q5VTU8 51 aa3.71□□□□□ -1.82
VAMP3-203ENST00000487194 IGFL1Q6UW32 110 aa3.71□□□□□ -1.82
VAMP3-203ENST00000487194 SRRM2Q9UQ35 2752 aaKnown RBP3.7□□□□□ -1.82
VAMP3-203ENST00000487194 IGLV9-49A0A0B4J1Y8 123 aa3.7□□□□□ -1.82
VAMP3-203ENST00000487194 MT-ATP8P03928 68 aa3.7□□□□□ -1.82
VAMP3-203ENST00000487194 FAM229BQ4G0N7 80 aa3.7□□□□□ -1.82
VAMP3-203ENST00000487194 Q6Q795 121 aa3.7□□□□□ -1.82
VAMP3-203ENST00000487194 HERC1Q15751 4861 aa3.7□□□□□ -1.82
VAMP3-203ENST00000487194 TRBV7-7A0A0K0K1E9 115 aa3.69□□□□□ -1.82
VAMP3-203ENST00000487194 NREPQ16612 68 aa3.69□□□□□ -1.82
VAMP3-203ENST00000487194 SPINK6Q6UWN8 80 aa3.69□□□□□ -1.82
VAMP3-203ENST00000487194 Q6ZVQ6 151 aa3.69□□□□□ -1.82
VAMP3-203ENST00000487194 IMUPQ9GZP8 106 aa3.69□□□□□ -1.82
VAMP3-203ENST00000487194 HSPG2P98160 4391 aa3.69□□□□□ -1.82
VAMP3-203ENST00000487194 SMR3BP02814 79 aaPredicted RBP3.68□□□□□ -1.82
VAMP3-203ENST00000487194 SCGB1A1P11684 91 aa3.68□□□□□ -1.82
VAMP3-203ENST00000487194 MOBPQ13875 183 aa3.68□□□□□ -1.82
VAMP3-203ENST00000487194 SSBP3-AS1Q7Z2R9 100 aa3.68□□□□□ -1.82
VAMP3-203ENST00000487194 CDK2AP2O75956 126 aa3.67□□□□□ -1.82
VAMP3-203ENST00000487194 PLA2G1BP04054 148 aaKnown RBP3.67□□□□□ -1.82
VAMP3-203ENST00000487194 CXCL6P80162 114 aa3.67□□□□□ -1.82
VAMP3-203ENST00000487194 ANAPC11Q9NYG5 84 aa3.67□□□□□ -1.82
VAMP3-203ENST00000487194 A0A087WSZ3 146 aa3.66□□□□□ -1.82
VAMP3-203ENST00000487194 IGKV3D-7A0A0C4DH55 119 aa3.66□□□□□ -1.82
VAMP3-203ENST00000487194 A0A0G2JQZ4 141 aa3.66□□□□□ -1.82
VAMP3-203ENST00000487194 FAM229AH3BQW9 127 aa3.66□□□□□ -1.82
VAMP3-203ENST00000487194 SS18L2Q9UHA2 77 aa3.66□□□□□ -1.82
VAMP3-203ENST00000487194 PKHD1L1Q86WI1 4243 aa3.65□□□□□ -1.82
VAMP3-203ENST00000487194 ABCA13Q86UQ4 5058 aa3.65□□□□□ -1.82
VAMP3-203ENST00000487194 BPY2O14599 106 aa3.65□□□□□ -1.83
VAMP3-203ENST00000487194 KRTAP1-4P0C5Y4 121 aa3.65□□□□□ -1.83
VAMP3-203ENST00000487194 CD164Q04900 197 aa3.65□□□□□ -1.83
VAMP3-203ENST00000487194 KIAA1109Q2LD37 5005 aa3.64□□□□□ -1.83
VAMP3-203ENST00000487194 KRTAP10-4P60372 401 aaPredicted RBP3.64□□□□□ -1.83
VAMP3-203ENST00000487194 HIST1H4AP62805 103 aaKnown RBP3.64□□□□□ -1.83
VAMP3-203ENST00000487194 A0A087X002 238 aa3.63□□□□□ -1.83
VAMP3-203ENST00000487194 J3KT08 172 aa3.63□□□□□ -1.83
VAMP3-203ENST00000487194 KRTAP13-2Q52LG2 175 aa3.62□□□□□ -1.83
VAMP3-203ENST00000487194 HRCT1Q6UXD1 115 aa3.62□□□□□ -1.83
VAMP3-203ENST00000487194 TYMSOSQ8TAI1 123 aa3.62□□□□□ -1.83
VAMP3-203ENST00000487194 C4orf48Q5BLP8 95 aa3.61□□□□□ -1.83
VAMP3-203ENST00000487194 LINC00472Q9H8W2 130 aa3.61□□□□□ -1.83
VAMP3-203ENST00000487194 FAM236AA0A1B0GUQ0 79 aa3.6□□□□□ -1.83
VAMP3-203ENST00000487194 FAM236BA0A1B0GV22 79 aa3.6□□□□□ -1.83
VAMP3-203ENST00000487194 ASB16-AS1Q495Z4 193 aa3.6□□□□□ -1.83
VAMP3-203ENST00000487194 Q5VSD8 79 aa3.6□□□□□ -1.83
VAMP3-203ENST00000487194 Q5XG85 94 aa3.6□□□□□ -1.83
VAMP3-203ENST00000487194 SPAG11AQ6PDA7 123 aa3.6□□□□□ -1.83
VAMP3-203ENST00000487194 LIMD2Q9BT23 127 aa3.6□□□□□ -1.83
VAMP3-203ENST00000487194 A0A087WVE0 104 aa3.59□□□□□ -1.83
VAMP3-203ENST00000487194 NDUFB1O75438 58 aa3.59□□□□□ -1.83
VAMP3-203ENST00000487194 SPINK1P00995 79 aa3.59□□□□□ -1.83
VAMP3-203ENST00000487194 IGKV4-1P06312 121 aa3.59□□□□□ -1.83
VAMP3-203ENST00000487194 DSCR10P59022 87 aa3.59□□□□□ -1.83
VAMP3-203ENST00000487194 PRR26Q8N8Z3 221 aa3.59□□□□□ -1.83
VAMP3-203ENST00000487194 FAT3Q8TDW7 4589 aa3.58□□□□□ -1.84
VAMP3-203ENST00000487194 DMBT1Q9UGM3 2413 aaPredicted RBP3.58□□□□□ -1.84
VAMP3-203ENST00000487194 A8MWP4 228 aa3.58□□□□□ -1.84
VAMP3-203ENST00000487194 ATOX1O00244 68 aa3.58□□□□□ -1.84
VAMP3-203ENST00000487194 PCP4P48539 62 aa3.58□□□□□ -1.84
VAMP3-203ENST00000487194 RPS29P62273 56 aaKnown RBP3.58□□□□□ -1.84
VAMP3-203ENST00000487194 DEFB116Q30KQ4 102 aa3.58□□□□□ -1.84
VAMP3-203ENST00000487194 Q8N9L7 120 aa3.58□□□□□ -1.84
VAMP3-203ENST00000487194 K7EQZ3 153 aa3.57□□□□□ -1.84
VAMP3-203ENST00000487194 PRR15Q8IV56 129 aa3.57□□□□□ -1.84
VAMP3-203ENST00000487194 Q8N1X5 172 aa3.57□□□□□ -1.84
VAMP3-203ENST00000487194 LINC00304Q8N9R0 145 aa3.57□□□□□ -1.84
VAMP3-203ENST00000487194 Q96NJ1 140 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms