RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 E9PLD3 99 aa3.76□□□□□ -1.81
PDPN-205ENST00000487038 COPS9Q8WXC6 57 aa3.76□□□□□ -1.81
PDPN-205ENST00000487038 HSPB8Q9UJY1 196 aa3.76□□□□□ -1.81
PDPN-205ENST00000487038 A6NDN8 102 aa3.75□□□□□ -1.81
PDPN-205ENST00000487038 Q6ZVH6 145 aa3.75□□□□□ -1.81
PDPN-205ENST00000487038 SLC7A5P1Q8MH63 180 aa3.75□□□□□ -1.81
PDPN-205ENST00000487038 LITAFQ99732 161 aa3.75□□□□□ -1.81
PDPN-205ENST00000487038 PMCHL2Q9BQD1 86 aa3.75□□□□□ -1.81
PDPN-205ENST00000487038 A8MWP4 228 aa3.73□□□□□ -1.81
PDPN-205ENST00000487038 SERF1AO75920 110 aa3.73□□□□□ -1.81
PDPN-205ENST00000487038 HRES1P13985 223 aa3.73□□□□□ -1.81
PDPN-205ENST00000487038 MPLKIPQ8TAP9 179 aa3.73□□□□□ -1.81
PDPN-205ENST00000487038 KMT2DO14686 5537 aa3.72□□□□□ -1.81
PDPN-205ENST00000487038 SCGB1D1O95968 90 aa3.72□□□□□ -1.81
PDPN-205ENST00000487038 FABP4P15090 132 aa3.71□□□□□ -1.82
PDPN-205ENST00000487038 VAMP3Q15836 100 aa3.71□□□□□ -1.82
PDPN-205ENST00000487038 OCIAD2Q56VL3 154 aa3.71□□□□□ -1.82
PDPN-205ENST00000487038 Q6ZQY7 126 aa3.71□□□□□ -1.82
PDPN-205ENST00000487038 DSCR10P59022 87 aa3.7□□□□□ -1.82
PDPN-205ENST00000487038 hADV29S1A0JD25 119 aa3.69□□□□□ -1.82
PDPN-205ENST00000487038 IFITM1P13164 125 aa3.69□□□□□ -1.82
PDPN-205ENST00000487038 ANKRD39Q53RE8 183 aa3.69□□□□□ -1.82
PDPN-205ENST00000487038 SCGB1D4Q6XE38 83 aa3.69□□□□□ -1.82
PDPN-205ENST00000487038 Q8N9P0 234 aaPredicted RBP3.69□□□□□ -1.82
PDPN-205ENST00000487038 PPDPFLQ8WWR9 84 aa3.69□□□□□ -1.82
PDPN-205ENST00000487038 KRTAP16-1A8MUX0 517 aa3.68□□□□□ -1.82
PDPN-205ENST00000487038 SNAPINO95295 136 aa3.68□□□□□ -1.82
PDPN-205ENST00000487038 SMIM11BQ8TCY0 68 aa3.68□□□□□ -1.82
PDPN-205ENST00000487038 SIGMAR1Q99720 223 aa3.68□□□□□ -1.82
PDPN-205ENST00000487038 LINC00313P59037 77 aa3.67□□□□□ -1.82
PDPN-205ENST00000487038 NDUFA5Q16718 116 aa3.67□□□□□ -1.82
PDPN-205ENST00000487038 LINC00575Q6W349 94 aa3.67□□□□□ -1.82
PDPN-205ENST00000487038 NOTCH2NLQ7Z3S9 236 aa3.67□□□□□ -1.82
PDPN-205ENST00000487038 SNHG12Q9BXW3 62 aa3.67□□□□□ -1.82
PDPN-205ENST00000487038 APOC3P02656 99 aa3.66□□□□□ -1.82
PDPN-205ENST00000487038 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.66□□□□□ -1.82
PDPN-205ENST00000487038 TEN1Q86WV5 123 aa3.66□□□□□ -1.82
PDPN-205ENST00000487038 SVBPQ8N300 66 aa3.66□□□□□ -1.82
PDPN-205ENST00000487038 A0A087WSZ3 146 aa3.65□□□□□ -1.83
PDPN-205ENST00000487038 A6NJY4 79 aa3.65□□□□□ -1.83
PDPN-205ENST00000487038 H3BUT2 72 aa3.65□□□□□ -1.83
PDPN-205ENST00000487038 GHRHP01286 108 aa3.65□□□□□ -1.83
PDPN-205ENST00000487038 LINC00310P59036 64 aa3.65□□□□□ -1.83
PDPN-205ENST00000487038 TTTY13Q9BZ97 58 aa3.65□□□□□ -1.83
PDPN-205ENST00000487038 COLCA2A8K830 154 aa3.64□□□□□ -1.83
PDPN-205ENST00000487038 MUSTN1Q8IVN3 82 aa3.64□□□□□ -1.83
PDPN-205ENST00000487038 SYS1-DBNDD2H3BUS1 97 aa3.63□□□□□ -1.83
PDPN-205ENST00000487038 TRGC2P03986 189 aa3.63□□□□□ -1.83
PDPN-205ENST00000487038 YPEL4Q96NS1 127 aa3.63□□□□□ -1.83
PDPN-205ENST00000487038 A6NN06 94 aa3.62□□□□□ -1.83
PDPN-205ENST00000487038 LINC01545Q5VT33 79 aa3.62□□□□□ -1.83
PDPN-205ENST00000487038 C12orf57Q99622 126 aa3.62□□□□□ -1.83
PDPN-205ENST00000487038 IGKV4-1P06312 121 aa3.61□□□□□ -1.83
PDPN-205ENST00000487038 BVES-AS1Q5T3Y7 98 aa3.61□□□□□ -1.83
PDPN-205ENST00000487038 PET117Q6UWS5 81 aa3.61□□□□□ -1.83
PDPN-205ENST00000487038 SNCGO76070 127 aa3.6□□□□□ -1.83
PDPN-205ENST00000487038 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
PDPN-205ENST00000487038 SPINK7P58062 85 aa3.59□□□□□ -1.83
PDPN-205ENST00000487038 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
PDPN-205ENST00000487038 WFDC13Q8IUB5 93 aa3.58□□□□□ -1.84
PDPN-205ENST00000487038 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
PDPN-205ENST00000487038 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
PDPN-205ENST00000487038 IGHV6-1A0A0B4J1U7 121 aa3.57□□□□□ -1.84
PDPN-205ENST00000487038 C3orf79P0CE67 100 aa3.57□□□□□ -1.84
PDPN-205ENST00000487038 NDUFV3P56181 108 aaKnown RBP3.57□□□□□ -1.84
PDPN-205ENST00000487038 ZCCHC13Q8WW36 166 aaKnown RBP3.57□□□□□ -1.84
PDPN-205ENST00000487038 FAM218AQ96MZ4 157 aa3.57□□□□□ -1.84
PDPN-205ENST00000487038 A0A1W2PNM2 257 aa3.56□□□□□ -1.84
PDPN-205ENST00000487038 C8orf87E5RJ46 101 aa3.56□□□□□ -1.84
PDPN-205ENST00000487038 H3BMG7 143 aa3.55□□□□□ -1.84
PDPN-205ENST00000487038 TRBV7-4A0A0J9YYF1 115 aa3.53□□□□□ -1.84
PDPN-205ENST00000487038 RAB37Q96AX2 223 aa3.53□□□□□ -1.84
PDPN-205ENST00000487038 A0A1B0GVX0 72 aa3.52□□□□□ -1.85
PDPN-205ENST00000487038 KRTDAPP60985 99 aa3.52□□□□□ -1.85
PDPN-205ENST00000487038 DEFB116Q30KQ4 102 aa3.52□□□□□ -1.85
PDPN-205ENST00000487038 Q5VV11 94 aa3.52□□□□□ -1.85
PDPN-205ENST00000487038 DSCR8Q96T75 97 aa3.52□□□□□ -1.85
PDPN-205ENST00000487038 LYRM7Q5U5X0 104 aa3.51□□□□□ -1.85
PDPN-205ENST00000487038 H0YGX0 51 aa3.5□□□□□ -1.85
PDPN-205ENST00000487038 FABP2P12104 132 aa3.5□□□□□ -1.85
PDPN-205ENST00000487038 SNRPEP62304 92 aaKnown RBP3.5□□□□□ -1.85
PDPN-205ENST00000487038 H1FX-AS1Q4G0G2 97 aa3.5□□□□□ -1.85
PDPN-205ENST00000487038 ANKRD29Q8N6D5 301 aa3.5□□□□□ -1.85
PDPN-205ENST00000487038 LINC00472Q9H8W2 130 aa3.5□□□□□ -1.85
PDPN-205ENST00000487038 FAM236AA0A1B0GUQ0 79 aa3.49□□□□□ -1.85
PDPN-205ENST00000487038 FAM236BA0A1B0GV22 79 aa3.49□□□□□ -1.85
PDPN-205ENST00000487038 TRACP01848 142 aa3.49□□□□□ -1.85
PDPN-205ENST00000487038 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
PDPN-205ENST00000487038 ATOH7Q8N100 152 aa3.49□□□□□ -1.85
PDPN-205ENST00000487038 A0A1B0GX51 115 aa3.48□□□□□ -1.85
PDPN-205ENST00000487038 HIST1H2BKO60814 126 aa3.48□□□□□ -1.85
PDPN-205ENST00000487038 HIST1H2BJP06899 126 aa3.48□□□□□ -1.85
PDPN-205ENST00000487038 HIST1H2BOP23527 126 aa3.48□□□□□ -1.85
PDPN-205ENST00000487038 HIST1H2BBP33778 126 aa3.48□□□□□ -1.85
PDPN-205ENST00000487038 HIST1H2BDP58876 126 aa3.48□□□□□ -1.85
PDPN-205ENST00000487038 HIST1H2BCP62807 126 aa3.48□□□□□ -1.85
PDPN-205ENST00000487038 HIST2H2BEQ16778 126 aa3.48□□□□□ -1.85
PDPN-205ENST00000487038 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.48□□□□□ -1.85
PDPN-205ENST00000487038 HIST1H2BHQ93079 126 aa3.48□□□□□ -1.85
PDPN-205ENST00000487038 HIST1H2BNQ99877 126 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms