RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 DNAH2Q9P225 4427 aa-0.65□□□□□ -2.51
LTN1-206ENST00000486427 WIZO95785 1651 aa-0.65□□□□□ -2.51
LTN1-206ENST00000486427 MYMXA0A1B0GTQ4 84 aa-0.65□□□□□ -2.51
LTN1-206ENST00000486427 MAP3K4Q9Y6R4 1608 aa-0.66□□□□□ -2.51
LTN1-206ENST00000486427 LINC00158P58513 81 aa-0.66□□□□□ -2.52
LTN1-206ENST00000486427 PRO3102Q9H379 93 aa-0.66□□□□□ -2.52
LTN1-206ENST00000486427 MAGI3Q5TCQ9 1506 aa-0.66□□□□□ -2.52
LTN1-206ENST00000486427 DEPDC5O75140 1603 aa-0.67□□□□□ -2.52
LTN1-206ENST00000486427 ABCC3O15438 1527 aa-0.67□□□□□ -2.52
LTN1-206ENST00000486427 MAP3K1Q13233 1512 aa-0.67□□□□□ -2.52
LTN1-206ENST00000486427 C9orf92A6NGG3 77 aa-0.67□□□□□ -2.52
LTN1-206ENST00000486427 PLECQ15149 4684 aaKnown RBP-0.67□□□□□ -2.52
LTN1-206ENST00000486427 NCOA2Q15596 1464 aa-0.67□□□□□ -2.52
LTN1-206ENST00000486427 ARFGEF2Q9Y6D5 1785 aa-0.68□□□□□ -2.52
LTN1-206ENST00000486427 CEBPZOSA8MTT3 80 aa-0.68□□□□□ -2.52
LTN1-206ENST00000486427 K7EP34 96 aa-0.68□□□□□ -2.52
LTN1-206ENST00000486427 C3orf79P0CE67 100 aa-0.68□□□□□ -2.52
LTN1-206ENST00000486427 PYY3Q5JQD4 70 aa-0.68□□□□□ -2.52
LTN1-206ENST00000486427 S100A16Q96FQ6 103 aaKnown RBP-0.68□□□□□ -2.52
LTN1-206ENST00000486427 LRRK2Q5S007 2527 aa-0.68□□□□□ -2.52
LTN1-206ENST00000486427 PPLO60437 1756 aa-0.68□□□□□ -2.52
LTN1-206ENST00000486427 NBEAQ8NFP9 2946 aa-0.68□□□□□ -2.52
LTN1-206ENST00000486427 MTORP42345 2549 aa-0.69□□□□□ -2.52
LTN1-206ENST00000486427 WDR87Q6ZQQ6 2873 aa-0.69□□□□□ -2.52
LTN1-206ENST00000486427 DIP2BQ9P265 1576 aa-0.69□□□□□ -2.52
LTN1-206ENST00000486427 H0YAA0 97 aa-0.69□□□□□ -2.52
LTN1-206ENST00000486427 SNRPFP62306 86 aaKnown RBP-0.69□□□□□ -2.52
LTN1-206ENST00000486427 DEFA5Q01523 94 aa-0.69□□□□□ -2.52
LTN1-206ENST00000486427 LINC00643Q86TS7 51 aa-0.69□□□□□ -2.52
LTN1-206ENST00000486427 KIF14Q15058 1648 aa-0.69□□□□□ -2.52
LTN1-206ENST00000486427 URB2Q14146 1524 aaKnown RBP-0.69□□□□□ -2.52
LTN1-206ENST00000486427 CCNB3Q8WWL7 1395 aa-0.7□□□□□ -2.52
LTN1-206ENST00000486427 PLIN4Q96Q06 1357 aa-0.7□□□□□ -2.52
LTN1-206ENST00000486427 UTP20O75691 2785 aaKnown RBP-0.7□□□□□ -2.52
LTN1-206ENST00000486427 NDUFB1O75438 58 aa-0.7□□□□□ -2.52
LTN1-206ENST00000486427 Q9H521 79 aa-0.7□□□□□ -2.52
LTN1-206ENST00000486427 RABAC1Q9UI14 185 aa-0.7□□□□□ -2.52
LTN1-206ENST00000486427 CCDC88BA6NC98 1476 aa-0.7□□□□□ -2.52
LTN1-206ENST00000486427 ACACAQ13085 2346 aa-0.7□□□□□ -2.52
LTN1-206ENST00000486427 DDX60LQ5H9U9 1706 aaKnown RBP-0.7□□□□□ -2.52
LTN1-206ENST00000486427 TTC37Q6PGP7 1564 aa-0.7□□□□□ -2.52
LTN1-206ENST00000486427 SACSQ9NZJ4 4579 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 PIK3C2BO00750 1634 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 RYR3Q15413 4870 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 MGAM2Q2M2H8 2515 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 DNAH1Q9P2D7 4330 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 A0A0C4DFX4 3053 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 LCE6AA0A183 80 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 ACYP1P07311 99 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 DOPEY1Q5JWR5 2465 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 RANBP2P49792 3224 aaKnown RBP-0.71□□□□□ -2.52
LTN1-206ENST00000486427 THOC2Q8NI27 1593 aaKnown RBP-0.71□□□□□ -2.52
LTN1-206ENST00000486427 RYR2Q92736 4967 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 LAMA3Q16787 3333 aa-0.71□□□□□ -2.52
LTN1-206ENST00000486427 PLCH1Q4KWH8 1693 aa-0.72□□□□□ -2.52
LTN1-206ENST00000486427 CEP290O15078 2479 aa-0.72□□□□□ -2.52
LTN1-206ENST00000486427 TRIOO75962 3097 aa-0.72□□□□□ -2.52
LTN1-206ENST00000486427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.72□□□□□ -2.52
LTN1-206ENST00000486427 RNF213Q63HN8 5207 aa-0.72□□□□□ -2.52
LTN1-206ENST00000486427 V9GYS6 101 aa-0.72□□□□□ -2.52
LTN1-206ENST00000486427 DNAH8Q96JB1 4490 aa-0.72□□□□□ -2.52
LTN1-206ENST00000486427 DNHD1Q96M86 4753 aa-0.72□□□□□ -2.52
LTN1-206ENST00000486427 CFAP43Q8NDM7 1665 aa-0.72□□□□□ -2.53
LTN1-206ENST00000486427 NBEAL2Q6ZNJ1 2754 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 CCDC168Q8NDH2 2452 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 DNAH7Q8WXX0 4024 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 PVALEFA0A1B0GWK0 134 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 IFI6P09912 130 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 DEFB130BP0DP73 79 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 DEFB130AP0DP74 79 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 PRLHP81277 87 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 TDRG1Q3Y452 100 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 FAM186AA6NE01 2351 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 NEBP20929 6669 aa-0.73□□□□□ -2.53
LTN1-206ENST00000486427 TEX15Q9BXT5 2789 aa-0.74□□□□□ -2.53
LTN1-206ENST00000486427 UMAD1C9J7I0 102 aa-0.74□□□□□ -2.53
LTN1-206ENST00000486427 LYNX1G3V0Z9 82 aa-0.74□□□□□ -2.53
LTN1-206ENST00000486427 IFI27P40305 119 aaPredicted RBP-0.74□□□□□ -2.53
LTN1-206ENST00000486427 S4R3F8 94 aa-0.74□□□□□ -2.53
LTN1-206ENST00000486427 PKD1L2Q7Z442 2459 aa-0.74□□□□□ -2.53
LTN1-206ENST00000486427 LAMA2P24043 3122 aaKnown RBP-0.74□□□□□ -2.53
LTN1-206ENST00000486427 RELNP78509 3460 aa-0.74□□□□□ -2.53
LTN1-206ENST00000486427 ITSN1Q15811 1721 aa-0.75□□□□□ -2.53
LTN1-206ENST00000486427 RICTORQ6R327 1708 aa-0.75□□□□□ -2.53
LTN1-206ENST00000486427 CMYA5Q8N3K9 4069 aa-0.75□□□□□ -2.53
LTN1-206ENST00000486427 KIAA1109Q2LD37 5005 aa-0.75□□□□□ -2.53
LTN1-206ENST00000486427 NDUFA4O00483 81 aa-0.75□□□□□ -2.53
LTN1-206ENST00000486427 TJP1Q07157 1748 aa-0.75□□□□□ -2.53
LTN1-206ENST00000486427 ACACBO00763 2458 aa-0.76□□□□□ -2.53
LTN1-206ENST00000486427 IAPPP10997 89 aa-0.76□□□□□ -2.53
LTN1-206ENST00000486427 ZC3H13Q5T200 1668 aaKnown RBP-0.76□□□□□ -2.53
LTN1-206ENST00000486427 ANKRD36CQ5JPF3 1778 aa-0.76□□□□□ -2.53
LTN1-206ENST00000486427 RNF17Q9BXT8 1623 aaKnown RBP-0.77□□□□□ -2.53
LTN1-206ENST00000486427 NREPQ16612 68 aa-0.77□□□□□ -2.53
LTN1-206ENST00000486427 KANTRA0A1W2PQU2 76 aa-0.78□□□□□ -2.53
LTN1-206ENST00000486427 DEFB110Q30KQ9 67 aa-0.78□□□□□ -2.53
LTN1-206ENST00000486427 DEFB106AQ8N104 65 aa-0.78□□□□□ -2.53
LTN1-206ENST00000486427 DYNC1H1Q14204 4646 aaKnown RBP-0.78□□□□□ -2.53
LTN1-206ENST00000486427 ITSN2Q9NZM3 1697 aa-0.78□□□□□ -2.53
LTN1-206ENST00000486427 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.78□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms