RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 Q8N377 158 aa9.05□□□□□ -0.96
POLR2J3-204ENST00000486319 SIGMAR1Q99720 223 aa9.05□□□□□ -0.96
POLR2J3-204ENST00000486319 ERC2-IT1O76042 136 aa9.04□□□□□ -0.96
POLR2J3-204ENST00000486319 C21orf62-AS1Q17RA5 79 aa9.04□□□□□ -0.96
POLR2J3-204ENST00000486319 ABCA13Q86UQ4 5058 aa9.03□□□□□ -0.96
POLR2J3-204ENST00000486319 UBE2AP49459 152 aa9.03□□□□□ -0.96
POLR2J3-204ENST00000486319 ST20-AS1Q8NBB2 130 aa9.03□□□□□ -0.96
POLR2J3-204ENST00000486319 FAT1Q14517 4588 aa9.02□□□□□ -0.97
POLR2J3-204ENST00000486319 FAM229AH3BQW9 127 aa9.02□□□□□ -0.97
POLR2J3-204ENST00000486319 Q5VSD8 79 aa9.02□□□□□ -0.97
POLR2J3-204ENST00000486319 HIGD2AQ9BW72 106 aa9.02□□□□□ -0.97
POLR2J3-204ENST00000486319 DNAH8Q96JB1 4490 aa9.02□□□□□ -0.97
POLR2J3-204ENST00000486319 Q6ZQT0 140 aa9.01□□□□□ -0.97
POLR2J3-204ENST00000486319 SCXQ7RTU7 201 aa9.01□□□□□ -0.97
POLR2J3-204ENST00000486319 TRBV7-4A0A0J9YYF1 115 aa9□□□□□ -0.97
POLR2J3-204ENST00000486319 CIRBP-AS1Q8TBR5 109 aa8.99□□□□□ -0.97
POLR2J3-204ENST00000486319 KRTAP13-1Q8IUC0 172 aa8.98□□□□□ -0.97
POLR2J3-204ENST00000486319 PSORS1C2Q9UIG4 136 aa8.96□□□□□ -0.97
POLR2J3-204ENST00000486319 MT-ATP8P03928 68 aa8.95□□□□□ -0.98
POLR2J3-204ENST00000486319 LINC00643Q86TS7 51 aa8.95□□□□□ -0.98
POLR2J3-204ENST00000486319 LINC00846Q9NV44 126 aa8.95□□□□□ -0.98
POLR2J3-204ENST00000486319 C3orf22Q8N5N4 141 aa8.95□□□□□ -0.98
POLR2J3-204ENST00000486319 F8WEM9 126 aa8.94□□□□□ -0.98
POLR2J3-204ENST00000486319 PLA2G1BP04054 148 aaKnown RBP8.94□□□□□ -0.98
POLR2J3-204ENST00000486319 SPRR1BP22528 89 aa8.94□□□□□ -0.98
POLR2J3-204ENST00000486319 C1orf137Q5JT78 98 aa8.94□□□□□ -0.98
POLR2J3-204ENST00000486319 SMIM29Q86T20 159 aa8.93□□□□□ -0.98
POLR2J3-204ENST00000486319 SRRM2Q9UQ35 2752 aaKnown RBP8.91□□□□□ -0.98
POLR2J3-204ENST00000486319 UBL5Q9BZL1 73 aa8.9□□□□□ -0.98
POLR2J3-204ENST00000486319 ZNF861PO60384 105 aa8.9□□□□□ -0.99
POLR2J3-204ENST00000486319 SCGB1A1P11684 91 aa8.89□□□□□ -0.99
POLR2J3-204ENST00000486319 ZNF706Q9Y5V0 76 aaPredicted RBP8.89□□□□□ -0.99
POLR2J3-204ENST00000486319 VPS13BQ7Z7G8 4022 aa8.88□□□□□ -0.99
POLR2J3-204ENST00000486319 IGLV8-61A0A075B6I0 122 aa8.88□□□□□ -0.99
POLR2J3-204ENST00000486319 A0A1B0GW54 56 aa8.88□□□□□ -0.99
POLR2J3-204ENST00000486319 Q6JHZ5 121 aa8.87□□□□□ -0.99
POLR2J3-204ENST00000486319 Q6Q795 121 aa8.87□□□□□ -0.99
POLR2J3-204ENST00000486319 TRBV7-7A0A0K0K1E9 115 aa8.86□□□□□ -0.99
POLR2J3-204ENST00000486319 IGLV7-43P04211 117 aa8.86□□□□□ -0.99
POLR2J3-204ENST00000486319 SPRR4Q96PI1 79 aa8.86□□□□□ -0.99
POLR2J3-204ENST00000486319 IMUPQ9GZP8 106 aa8.85□□□□□ -0.99
POLR2J3-204ENST00000486319 RPL37AP61513 92 aaKnown RBP8.85□□□□□ -0.99
POLR2J3-204ENST00000486319 ATP5EP2Q5VTU8 51 aa8.85□□□□□ -0.99
POLR2J3-204ENST00000486319 Q8NBF4 154 aa8.85□□□□□ -0.99
POLR2J3-204ENST00000486319 A0A1W2PNM2 257 aa8.83□□□□□ -1
POLR2J3-204ENST00000486319 KRTAP10-4P60372 401 aaPredicted RBP8.83□□□□□ -1
POLR2J3-204ENST00000486319 LINC00483Q53H64 154 aa8.83□□□□□ -1
POLR2J3-204ENST00000486319 Q6ZVQ6 151 aa8.83□□□□□ -1
POLR2J3-204ENST00000486319 IGFL1Q6UW32 110 aa8.82□□□□□ -1
POLR2J3-204ENST00000486319 FLG2Q5D862 2391 aaPredicted RBP8.82□□□□□ -1
POLR2J3-204ENST00000486319 MYCBP2O75592 4640 aa8.8□□□□□ -1
POLR2J3-204ENST00000486319 IGKV3D-7A0A0C4DH55 119 aa8.8□□□□□ -1
POLR2J3-204ENST00000486319 CRYGAP11844 174 aa8.79□□□□□ -1
POLR2J3-204ENST00000486319 NREPQ16612 68 aa8.78□□□□□ -1
POLR2J3-204ENST00000486319 PCP4P48539 62 aa8.77□□□□□ -1.01
POLR2J3-204ENST00000486319 CXCL6P80162 114 aa8.76□□□□□ -1.01
POLR2J3-204ENST00000486319 IGLV9-49A0A0B4J1Y8 123 aa8.75□□□□□ -1.01
POLR2J3-204ENST00000486319 C9orf153Q5TBE3 101 aa8.75□□□□□ -1.01
POLR2J3-204ENST00000486319 A0A0G2JQZ4 141 aa8.74□□□□□ -1.01
POLR2J3-204ENST00000486319 J3QL48 77 aa8.73□□□□□ -1.01
POLR2J3-204ENST00000486319 KRTAP29-1A8MX34 341 aaPredicted RBP8.72□□□□□ -1.01
POLR2J3-204ENST00000486319 DMBT1Q9UGM3 2413 aaPredicted RBP8.72□□□□□ -1.01
POLR2J3-204ENST00000486319 HIST1H4AP62805 103 aaKnown RBP8.71□□□□□ -1.01
POLR2J3-204ENST00000486319 BPY2O14599 106 aa8.7□□□□□ -1.02
POLR2J3-204ENST00000486319 A0A087WSZ3 146 aa8.69□□□□□ -1.02
POLR2J3-204ENST00000486319 FAM236AA0A1B0GUQ0 79 aa8.69□□□□□ -1.02
POLR2J3-204ENST00000486319 FAM236BA0A1B0GV22 79 aa8.69□□□□□ -1.02
POLR2J3-204ENST00000486319 OXTP01178 125 aa8.69□□□□□ -1.02
POLR2J3-204ENST00000486319 MOBPQ13875 183 aa8.69□□□□□ -1.02
POLR2J3-204ENST00000486319 ANAPC11Q9NYG5 84 aa8.69□□□□□ -1.02
POLR2J3-204ENST00000486319 HERC1Q15751 4861 aa8.68□□□□□ -1.02
POLR2J3-204ENST00000486319 LRP1Q07954 4544 aaKnown RBP8.67□□□□□ -1.02
POLR2J3-204ENST00000486319 A0A087WVE0 104 aa8.66□□□□□ -1.02
POLR2J3-204ENST00000486319 FAM229BQ4G0N7 80 aa8.65□□□□□ -1.02
POLR2J3-204ENST00000486319 SSBP3-AS1Q7Z2R9 100 aa8.64□□□□□ -1.03
POLR2J3-204ENST00000486319 ANAPC13Q9BS18 74 aa8.64□□□□□ -1.03
POLR2J3-204ENST00000486319 SPINK6Q6UWN8 80 aa8.63□□□□□ -1.03
POLR2J3-204ENST00000486319 PKHD1L1Q86WI1 4243 aa8.62□□□□□ -1.03
POLR2J3-204ENST00000486319 FAT3Q8TDW7 4589 aa8.61□□□□□ -1.03
POLR2J3-204ENST00000486319 SS18L2Q9UHA2 77 aa8.61□□□□□ -1.03
POLR2J3-204ENST00000486319 ATOX1O00244 68 aa8.6□□□□□ -1.03
POLR2J3-204ENST00000486319 IGKV4-1P06312 121 aa8.59□□□□□ -1.03
POLR2J3-204ENST00000486319 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.03
POLR2J3-204ENST00000486319 CD164Q04900 197 aa8.59□□□□□ -1.03
POLR2J3-204ENST00000486319 HRCT1Q6UXD1 115 aa8.59□□□□□ -1.03
POLR2J3-204ENST00000486319 DSCR10P59022 87 aa8.58□□□□□ -1.04
POLR2J3-204ENST00000486319 A0A087X002 238 aa8.57□□□□□ -1.04
POLR2J3-204ENST00000486319 Q8N9L7 120 aa8.57□□□□□ -1.04
POLR2J3-204ENST00000486319 LINC00472Q9H8W2 130 aa8.57□□□□□ -1.04
POLR2J3-204ENST00000486319 J3KT08 172 aa8.55□□□□□ -1.04
POLR2J3-204ENST00000486319 KRTAP13-2Q52LG2 175 aa8.55□□□□□ -1.04
POLR2J3-204ENST00000486319 MT1HL1P0DM35 61 aa8.54□□□□□ -1.04
POLR2J3-204ENST00000486319 DEFB116Q30KQ4 102 aa8.54□□□□□ -1.04
POLR2J3-204ENST00000486319 K7EQZ3 153 aa8.53□□□□□ -1.04
POLR2J3-204ENST00000486319 A8MWP4 228 aa8.49□□□□□ -1.05
POLR2J3-204ENST00000486319 SMIM20Q8N5G0 67 aa8.49□□□□□ -1.05
POLR2J3-204ENST00000486319 Q96NJ1 140 aa8.49□□□□□ -1.05
POLR2J3-204ENST00000486319 TYMSOSQ8TAI1 123 aa8.49□□□□□ -1.05
POLR2J3-204ENST00000486319 SERP2Q8N6R1 65 aa8.48□□□□□ -1.05
POLR2J3-204ENST00000486319 NDUFB1O75438 58 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms