RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 C5orf47Q569G3 176 aa3.34□□□□□ -1.88
SEMA3D-204ENST00000484038 SPRR4Q96PI1 79 aa3.34□□□□□ -1.88
SEMA3D-204ENST00000484038 TIMM17AQ99595 171 aa3.34□□□□□ -1.88
SEMA3D-204ENST00000484038 HIGD1BQ9P298 99 aa3.34□□□□□ -1.88
SEMA3D-204ENST00000484038 NDUFA12Q9UI09 145 aa3.34□□□□□ -1.88
SEMA3D-204ENST00000484038 ZNF815PA8K554 130 aa3.33□□□□□ -1.88
SEMA3D-204ENST00000484038 H3BUT2 72 aa3.33□□□□□ -1.88
SEMA3D-204ENST00000484038 TSPEAR-AS2P59090 65 aa3.33□□□□□ -1.88
SEMA3D-204ENST00000484038 TMEM170BQ5T4T1 132 aa3.33□□□□□ -1.88
SEMA3D-204ENST00000484038 CEND1Q8N111 149 aa3.33□□□□□ -1.88
SEMA3D-204ENST00000484038 NHP2Q9NX24 153 aaKnown RBP3.33□□□□□ -1.88
SEMA3D-204ENST00000484038 TINCRA0A1B0GVN0 87 aa3.32□□□□□ -1.88
SEMA3D-204ENST00000484038 SPINK1P00995 79 aa3.32□□□□□ -1.88
SEMA3D-204ENST00000484038 SMIM13P0DJ93 91 aa3.32□□□□□ -1.88
SEMA3D-204ENST00000484038 HERVK_113P61574 105 aa3.32□□□□□ -1.88
SEMA3D-204ENST00000484038 MT1HP80294 61 aa3.32□□□□□ -1.88
SEMA3D-204ENST00000484038 HIST1H4GQ99525 98 aa3.32□□□□□ -1.88
SEMA3D-204ENST00000484038 SND1-IT1Q9HBX3 110 aa3.32□□□□□ -1.88
SEMA3D-204ENST00000484038 ZNF706Q9Y5V0 76 aaPredicted RBP3.32□□□□□ -1.88
SEMA3D-204ENST00000484038 A0A1B0GV72 72 aa3.31□□□□□ -1.88
SEMA3D-204ENST00000484038 LINC01549A6NIU2 74 aa3.31□□□□□ -1.88
SEMA3D-204ENST00000484038 SCGB1A1P11684 91 aa3.31□□□□□ -1.88
SEMA3D-204ENST00000484038 ZNF22P17026 224 aaPredicted RBP3.31□□□□□ -1.88
SEMA3D-204ENST00000484038 Q8NDZ9 215 aa3.31□□□□□ -1.88
SEMA3D-204ENST00000484038 ERG28Q9UKR5 140 aa3.31□□□□□ -1.88
SEMA3D-204ENST00000484038 A0A1W2PPM0 123 aa3.3□□□□□ -1.88
SEMA3D-204ENST00000484038 TMEM223A0PJW6 202 aa3.3□□□□□ -1.88
SEMA3D-204ENST00000484038 KRTAP9-6A8MVA2 160 aa3.3□□□□□ -1.88
SEMA3D-204ENST00000484038 HERV-K104P63124 156 aa3.3□□□□□ -1.88
SEMA3D-204ENST00000484038 MOBPQ13875 183 aa3.3□□□□□ -1.88
SEMA3D-204ENST00000484038 TAL2Q16559 108 aa3.3□□□□□ -1.88
SEMA3D-204ENST00000484038 SCGB1D4Q6XE38 83 aa3.3□□□□□ -1.88
SEMA3D-204ENST00000484038 ZNF625Q96I27 306 aaPredicted RBP3.3□□□□□ -1.88
SEMA3D-204ENST00000484038 J3QQQ9 107 aa3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 K7EP34 96 aa3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 LEPROTO15243 131 aa3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 LGALS3P17931 250 aaKnown RBP3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 SPCS1Q9Y6A9 102 aa3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 M0R2T5 61 aa3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 FABP2P12104 132 aa3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 SEC61GP60059 68 aa3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 COX17Q14061 63 aa3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 GTF2H5Q6ZYL4 71 aa3.29□□□□□ -1.88
SEMA3D-204ENST00000484038 IGLV8-61A0A075B6I0 122 aa3.28□□□□□ -1.88
SEMA3D-204ENST00000484038 SLC25A20O43772 301 aa3.28□□□□□ -1.88
SEMA3D-204ENST00000484038 PCOTHQ58A44 107 aa3.28□□□□□ -1.88
SEMA3D-204ENST00000484038 SFTA2Q6UW10 78 aa3.28□□□□□ -1.88
SEMA3D-204ENST00000484038 SMCR5Q8TEV8 140 aa3.28□□□□□ -1.88
SEMA3D-204ENST00000484038 ETDCA0A1B0GVM5 59 aa3.27□□□□□ -1.89
SEMA3D-204ENST00000484038 A0A1B0GWB2 263 aa3.27□□□□□ -1.89
SEMA3D-204ENST00000484038 RPS29P62273 56 aaKnown RBP3.27□□□□□ -1.89
SEMA3D-204ENST00000484038 MTURNQ8N3F0 131 aa3.27□□□□□ -1.89
SEMA3D-204ENST00000484038 SPANXB1Q9NS25 103 aaPredicted RBP3.27□□□□□ -1.89
SEMA3D-204ENST00000484038 A0A0J9YXY3 114 aa3.26□□□□□ -1.89
SEMA3D-204ENST00000484038 A0A0U1RRA0 63 aa3.26□□□□□ -1.89
SEMA3D-204ENST00000484038 NCR3O14931 201 aa3.26□□□□□ -1.89
SEMA3D-204ENST00000484038 NDUFV3P56181 108 aaKnown RBP3.26□□□□□ -1.89
SEMA3D-204ENST00000484038 LINC00158P58513 81 aa3.26□□□□□ -1.89
SEMA3D-204ENST00000484038 LINC00483Q53H64 154 aa3.26□□□□□ -1.89
SEMA3D-204ENST00000484038 OCIAD2Q56VL3 154 aa3.26□□□□□ -1.89
SEMA3D-204ENST00000484038 MUSTN1Q8IVN3 82 aa3.26□□□□□ -1.89
SEMA3D-204ENST00000484038 NPC2P61916 151 aa3.25□□□□□ -1.89
SEMA3D-204ENST00000484038 C9orf153Q5TBE3 101 aa3.25□□□□□ -1.89
SEMA3D-204ENST00000484038 LOC107984156A0A0G2JMH3 177 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 C9orf92A6NGG3 77 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 H3BMG7 143 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 H7C2G1 150 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 SPRR1AP35321 89 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 PSMB2P49721 201 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 ARL17AQ8IVW1 177 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 KRTAP4-16G5E9R7 235 aaPredicted RBP3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 ERC2-IT1O76042 136 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 COX6B2Q6YFQ2 88 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 OCR1Q9BZK8 76 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 KCNQ1DNQ9H478 68 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 PRO1854Q9UHT4 67 aa3.24□□□□□ -1.89
SEMA3D-204ENST00000484038 TRBV10-3A0A0K0K1G6 114 aa3.23□□□□□ -1.89
SEMA3D-204ENST00000484038 VPS25Q9BRG1 176 aa3.23□□□□□ -1.89
SEMA3D-204ENST00000484038 SPANXDQ9BXN6 97 aa3.23□□□□□ -1.89
SEMA3D-204ENST00000484038 SPANXCQ9NY87 97 aa3.23□□□□□ -1.89
SEMA3D-204ENST00000484038 PRO0461Q9UI25 63 aa3.23□□□□□ -1.89
SEMA3D-204ENST00000484038 A0A0B4J2C4 111 aa3.22□□□□□ -1.89
SEMA3D-204ENST00000484038 TCL1BO95988 128 aa3.22□□□□□ -1.89
SEMA3D-204ENST00000484038 Q1RN00 199 aa3.22□□□□□ -1.89
SEMA3D-204ENST00000484038 MEIG1Q5JSS6 88 aa3.22□□□□□ -1.89
SEMA3D-204ENST00000484038 Q6ZVQ6 151 aa3.22□□□□□ -1.89
SEMA3D-204ENST00000484038 MIR7-3HGQ8N6C7 128 aa3.22□□□□□ -1.89
SEMA3D-204ENST00000484038 Q9BRP9 147 aa3.22□□□□□ -1.89
SEMA3D-204ENST00000484038 F8W1H4 67 aa3.21□□□□□ -1.9
SEMA3D-204ENST00000484038 K7ERU9 68 aa3.21□□□□□ -1.9
SEMA3D-204ENST00000484038 TIMM17BO60830 172 aa3.21□□□□□ -1.9
SEMA3D-204ENST00000484038 SCGB1C2P0DMR2 95 aa3.21□□□□□ -1.9
SEMA3D-204ENST00000484038 HRCT1Q6UXD1 115 aa3.21□□□□□ -1.9
SEMA3D-204ENST00000484038 ETDBQ3ZM63 59 aa3.2□□□□□ -1.9
SEMA3D-204ENST00000484038 LYRM7Q5U5X0 104 aa3.2□□□□□ -1.9
SEMA3D-204ENST00000484038 SOSTDC1Q6X4U4 206 aa3.2□□□□□ -1.9
SEMA3D-204ENST00000484038 Q6ZRX8 168 aa3.2□□□□□ -1.9
SEMA3D-204ENST00000484038 LINC00308Q8TCZ7 52 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms