RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 LINC00528Q8N1L1 170 aa6.48□□□□□ -1.37
HLA-DQA1-206ENST00000482745 BRK1Q8WUW1 75 aa6.48□□□□□ -1.37
HLA-DQA1-206ENST00000482745 PRR3P79522 188 aaKnown RBP6.46□□□□□ -1.37
HLA-DQA1-206ENST00000482745 NREPQ16612 68 aa6.46□□□□□ -1.37
HLA-DQA1-206ENST00000482745 C1orf195Q5TG92 126 aa6.46□□□□□ -1.37
HLA-DQA1-206ENST00000482745 LINC00474Q9P2X8 69 aa6.46□□□□□ -1.37
HLA-DQA1-206ENST00000482745 V9GYY9 64 aa6.46□□□□□ -1.37
HLA-DQA1-206ENST00000482745 C9orf163Q8N9P6 203 aa6.46□□□□□ -1.38
HLA-DQA1-206ENST00000482745 TMEM254Q8TBM7 123 aa6.46□□□□□ -1.38
HLA-DQA1-206ENST00000482745 CIRBP-AS1Q8TBR5 109 aa6.46□□□□□ -1.38
HLA-DQA1-206ENST00000482745 CHCHD10Q8WYQ3 142 aaPredicted RBP6.46□□□□□ -1.38
HLA-DQA1-206ENST00000482745 PLA2G1BP04054 148 aaKnown RBP6.45□□□□□ -1.38
HLA-DQA1-206ENST00000482745 FLG2Q5D862 2391 aaPredicted RBP6.45□□□□□ -1.38
HLA-DQA1-206ENST00000482745 CNBPP62633 177 aaKnown RBP6.44□□□□□ -1.38
HLA-DQA1-206ENST00000482745 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
HLA-DQA1-206ENST00000482745 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
HLA-DQA1-206ENST00000482745 BPY2O14599 106 aa6.43□□□□□ -1.38
HLA-DQA1-206ENST00000482745 HIGD2BQ4VC39 106 aa6.43□□□□□ -1.38
HLA-DQA1-206ENST00000482745 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.43□□□□□ -1.38
HLA-DQA1-206ENST00000482745 DMBT1Q9UGM3 2413 aaPredicted RBP6.42□□□□□ -1.38
HLA-DQA1-206ENST00000482745 SEC61GP60059 68 aa6.42□□□□□ -1.38
HLA-DQA1-206ENST00000482745 KIAA0087Q14695 138 aa6.42□□□□□ -1.38
HLA-DQA1-206ENST00000482745 Q6ZQY7 126 aa6.42□□□□□ -1.38
HLA-DQA1-206ENST00000482745 PANO1I0J062 215 aa6.41□□□□□ -1.38
HLA-DQA1-206ENST00000482745 PRYO14603 147 aa6.41□□□□□ -1.38
HLA-DQA1-206ENST00000482745 IGLV6-57P01721 117 aa6.41□□□□□ -1.38
HLA-DQA1-206ENST00000482745 A0A0U1RQV1 116 aa6.4□□□□□ -1.38
HLA-DQA1-206ENST00000482745 CD164L2Q6UWJ8 174 aa6.4□□□□□ -1.38
HLA-DQA1-206ENST00000482745 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.4□□□□□ -1.38
HLA-DQA1-206ENST00000482745 GVQW2A0A096LPI5 108 aaPredicted RBP6.39□□□□□ -1.39
HLA-DQA1-206ENST00000482745 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
HLA-DQA1-206ENST00000482745 FAM229BQ4G0N7 80 aa6.39□□□□□ -1.39
HLA-DQA1-206ENST00000482745 Q8NDZ9 215 aa6.39□□□□□ -1.39
HLA-DQA1-206ENST00000482745 MPLKIPQ8TAP9 179 aa6.38□□□□□ -1.39
HLA-DQA1-206ENST00000482745 OCR1Q9BZK8 76 aa6.38□□□□□ -1.39
HLA-DQA1-206ENST00000482745 COX7BP24311 80 aa6.38□□□□□ -1.39
HLA-DQA1-206ENST00000482745 RPL37AP61513 92 aaKnown RBP6.38□□□□□ -1.39
HLA-DQA1-206ENST00000482745 KRTAP10-4P60372 401 aaPredicted RBP6.37□□□□□ -1.39
HLA-DQA1-206ENST00000482745 DIRC1Q969H9 104 aa6.37□□□□□ -1.39
HLA-DQA1-206ENST00000482745 HERC1Q15751 4861 aa6.37□□□□□ -1.39
HLA-DQA1-206ENST00000482745 IGKV2-24A0A0C4DH68 120 aa6.37□□□□□ -1.39
HLA-DQA1-206ENST00000482745 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
HLA-DQA1-206ENST00000482745 SPACA4Q8TDM5 124 aa6.37□□□□□ -1.39
HLA-DQA1-206ENST00000482745 J3QL48 77 aa6.36□□□□□ -1.39
HLA-DQA1-206ENST00000482745 IGKV4-1P06312 121 aa6.36□□□□□ -1.39
HLA-DQA1-206ENST00000482745 PRR15Q8IV56 129 aa6.36□□□□□ -1.39
HLA-DQA1-206ENST00000482745 ELOF1P60002 83 aaKnown RBP6.34□□□□□ -1.4
HLA-DQA1-206ENST00000482745 SYCNQ0VAF6 134 aa6.34□□□□□ -1.4
HLA-DQA1-206ENST00000482745 A0A096LNI7 61 aa6.33□□□□□ -1.4
HLA-DQA1-206ENST00000482745 ZNF73O43830 326 aaPredicted RBP6.33□□□□□ -1.4
HLA-DQA1-206ENST00000482745 PKHD1L1Q86WI1 4243 aa6.32□□□□□ -1.4
HLA-DQA1-206ENST00000482745 PLAC8Q9NZF1 115 aa6.32□□□□□ -1.4
HLA-DQA1-206ENST00000482745 hDV103S1A0JD37 113 aa6.32□□□□□ -1.4
HLA-DQA1-206ENST00000482745 SPAG11BQ08648 103 aa6.32□□□□□ -1.4
HLA-DQA1-206ENST00000482745 Q1T7F1 81 aa6.32□□□□□ -1.4
HLA-DQA1-206ENST00000482745 Q6ZRU5 148 aa6.32□□□□□ -1.4
HLA-DQA1-206ENST00000482745 KRTAP29-1A8MX34 341 aaPredicted RBP6.31□□□□□ -1.4
HLA-DQA1-206ENST00000482745 CAMK2N2Q96S95 79 aa6.31□□□□□ -1.4
HLA-DQA1-206ENST00000482745 UNQ6190/PRO20217Q6UXQ8 127 aa6.31□□□□□ -1.4
HLA-DQA1-206ENST00000482745 C7orf33Q8WU49 177 aa6.31□□□□□ -1.4
HLA-DQA1-206ENST00000482745 HIGD2AQ9BW72 106 aa6.31□□□□□ -1.4
HLA-DQA1-206ENST00000482745 LRP1Q07954 4544 aaKnown RBP6.3□□□□□ -1.4
HLA-DQA1-206ENST00000482745 C10orf25Q5T742 122 aa6.3□□□□□ -1.4
HLA-DQA1-206ENST00000482745 Q8N9L7 120 aa6.3□□□□□ -1.4
HLA-DQA1-206ENST00000482745 PMAIP1Q13794 54 aa6.29□□□□□ -1.4
HLA-DQA1-206ENST00000482745 FAT3Q8TDW7 4589 aa6.28□□□□□ -1.4
HLA-DQA1-206ENST00000482745 A0A1B0GW54 56 aa6.28□□□□□ -1.4
HLA-DQA1-206ENST00000482745 Q6ZRP5 223 aa6.26□□□□□ -1.41
HLA-DQA1-206ENST00000482745 C1orf64Q8NEQ6 169 aa6.25□□□□□ -1.41
HLA-DQA1-206ENST00000482745 M0R378 163 aa6.25□□□□□ -1.41
HLA-DQA1-206ENST00000482745 SMIM29Q86T20 159 aa6.25□□□□□ -1.41
HLA-DQA1-206ENST00000482745 ZCCHC13Q8WW36 166 aaKnown RBP6.24□□□□□ -1.41
HLA-DQA1-206ENST00000482745 CYP4F30PQ9H0H9 118 aa6.24□□□□□ -1.41
HLA-DQA1-206ENST00000482745 XAGE1AQ9HD64 81 aa6.24□□□□□ -1.41
HLA-DQA1-206ENST00000482745 C6orf48Q9UBA6 75 aa6.24□□□□□ -1.41
HLA-DQA1-206ENST00000482745 A0A1W2PNN7 141 aa6.23□□□□□ -1.41
HLA-DQA1-206ENST00000482745 VPREB1P12018 145 aa6.23□□□□□ -1.41
HLA-DQA1-206ENST00000482745 IGLV5-48A0A075B6I7 105 aa6.22□□□□□ -1.41
HLA-DQA1-206ENST00000482745 TRAV22A0A0B4J277 110 aa6.21□□□□□ -1.42
HLA-DQA1-206ENST00000482745 ETDCA0A1B0GVM5 59 aa6.21□□□□□ -1.42
HLA-DQA1-206ENST00000482745 NDUFB1O75438 58 aa6.2□□□□□ -1.42
HLA-DQA1-206ENST00000482745 TLX1NBP0CAT3 122 aa6.2□□□□□ -1.42
HLA-DQA1-206ENST00000482745 PHF5AQ7RTV0 110 aaKnown RBP6.2□□□□□ -1.42
HLA-DQA1-206ENST00000482745 FAM168BA1KXE4 195 aa6.19□□□□□ -1.42
HLA-DQA1-206ENST00000482745 CD164Q04900 197 aa6.19□□□□□ -1.42
HLA-DQA1-206ENST00000482745 MT1HL1P0DM35 61 aa6.19□□□□□ -1.42
HLA-DQA1-206ENST00000482745 PSPHP1O15172 72 aa6.18□□□□□ -1.42
HLA-DQA1-206ENST00000482745 SERTAD4-AS1Q5TG53 156 aa6.18□□□□□ -1.42
HLA-DQA1-206ENST00000482745 PSORS1C2Q9UIG4 136 aa6.17□□□□□ -1.42
HLA-DQA1-206ENST00000482745 SPINK6Q6UWN8 80 aa6.17□□□□□ -1.42
HLA-DQA1-206ENST00000482745 Q8N377 158 aa6.17□□□□□ -1.42
HLA-DQA1-206ENST00000482745 C1orf137Q5JT78 98 aa6.16□□□□□ -1.42
HLA-DQA1-206ENST00000482745 UBE2BP63146 152 aa6.16□□□□□ -1.42
HLA-DQA1-206ENST00000482745 REG3GQ6UW15 175 aa6.15□□□□□ -1.42
HLA-DQA1-206ENST00000482745 Q8NBF4 154 aa6.15□□□□□ -1.42
HLA-DQA1-206ENST00000482745 A0A1W2PNM2 257 aa6.14□□□□□ -1.43
HLA-DQA1-206ENST00000482745 SPRR4Q96PI1 79 aa6.14□□□□□ -1.43
HLA-DQA1-206ENST00000482745 KCNQ1DNQ9H478 68 aa6.14□□□□□ -1.43
HLA-DQA1-206ENST00000482745 DHRS4-AS1Q9P1J3 65 aa6.14□□□□□ -1.43
HLA-DQA1-206ENST00000482745 TNXBP22105 4242 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms