RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 NDUFC1O43677 76 aa9.39□□□□□ -0.91
ATG4B-220ENST00000482507 DSCR10P59022 87 aa9.39□□□□□ -0.91
ATG4B-220ENST00000482507 UBE2DNLQ8IWF7 75 aa9.39□□□□□ -0.91
ATG4B-220ENST00000482507 WWC2-AS2Q96NR7 200 aa9.37□□□□□ -0.91
ATG4B-220ENST00000482507 IGKV2-24A0A0C4DH68 120 aa9.36□□□□□ -0.91
ATG4B-220ENST00000482507 LINC00476Q8WZB0 136 aa9.36□□□□□ -0.91
ATG4B-220ENST00000482507 HIGD2AQ9BW72 106 aa9.36□□□□□ -0.91
ATG4B-220ENST00000482507 FAM30AQ9NZY2 134 aa9.36□□□□□ -0.91
ATG4B-220ENST00000482507 PRLHP81277 87 aa9.36□□□□□ -0.91
ATG4B-220ENST00000482507 KMT2AQ03164 3969 aa9.35□□□□□ -0.91
ATG4B-220ENST00000482507 K7EQZ3 153 aa9.35□□□□□ -0.91
ATG4B-220ENST00000482507 IGFL1Q6UW32 110 aa9.33□□□□□ -0.92
ATG4B-220ENST00000482507 FP248Q71RG6 208 aaPredicted RBP9.33□□□□□ -0.92
ATG4B-220ENST00000482507 C16orf90A8MZG2 172 aa9.33□□□□□ -0.92
ATG4B-220ENST00000482507 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
ATG4B-220ENST00000482507 SRRM2Q9UQ35 2752 aaKnown RBP9.33□□□□□ -0.92
ATG4B-220ENST00000482507 SEC61GP60059 68 aa9.31□□□□□ -0.92
ATG4B-220ENST00000482507 CNBPP62633 177 aaKnown RBP9.31□□□□□ -0.92
ATG4B-220ENST00000482507 LINC00474Q9P2X8 69 aa9.31□□□□□ -0.92
ATG4B-220ENST00000482507 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.3□□□□□ -0.92
ATG4B-220ENST00000482507 LCE6AA0A183 80 aa9.3□□□□□ -0.92
ATG4B-220ENST00000482507 DEFB116Q30KQ4 102 aa9.3□□□□□ -0.92
ATG4B-220ENST00000482507 CHTF8P0CG12 524 aa9.29□□□□□ -0.92
ATG4B-220ENST00000482507 ATP5EP56381 51 aaPredicted RBP9.29□□□□□ -0.92
ATG4B-220ENST00000482507 LY6G6CO95867 125 aa9.27□□□□□ -0.92
ATG4B-220ENST00000482507 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.92
ATG4B-220ENST00000482507 SMIM26A0A096LP01 95 aa9.27□□□□□ -0.93
ATG4B-220ENST00000482507 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.93
ATG4B-220ENST00000482507 PSCAO43653 123 aa9.26□□□□□ -0.93
ATG4B-220ENST00000482507 PHF5AQ7RTV0 110 aaKnown RBP9.26□□□□□ -0.93
ATG4B-220ENST00000482507 IGLV8-61A0A075B6I0 122 aa9.26□□□□□ -0.93
ATG4B-220ENST00000482507 PRO0628Q9UI54 55 aa9.26□□□□□ -0.93
ATG4B-220ENST00000482507 A0A087WSZ3 146 aa9.25□□□□□ -0.93
ATG4B-220ENST00000482507 NBDYA0A0U1RRE5 68 aa9.23□□□□□ -0.93
ATG4B-220ENST00000482507 HCG22E2RYF7 251 aa9.23□□□□□ -0.93
ATG4B-220ENST00000482507 HYDINQ4G0P3 5121 aa9.23□□□□□ -0.93
ATG4B-220ENST00000482507 ZCCHC13Q8WW36 166 aaKnown RBP9.23□□□□□ -0.93
ATG4B-220ENST00000482507 UBE2AP49459 152 aa9.21□□□□□ -0.93
ATG4B-220ENST00000482507 RPL37AP61513 92 aaKnown RBP9.21□□□□□ -0.93
ATG4B-220ENST00000482507 LINC00336Q6ZUF6 198 aa9.19□□□□□ -0.94
ATG4B-220ENST00000482507 WFDC13Q8IUB5 93 aa9.19□□□□□ -0.94
ATG4B-220ENST00000482507 PANO1I0J062 215 aa9.19□□□□□ -0.94
ATG4B-220ENST00000482507 DNAH2Q9P225 4427 aa9.18□□□□□ -0.94
ATG4B-220ENST00000482507 LRCOL1A6NCL2 159 aa9.17□□□□□ -0.94
ATG4B-220ENST00000482507 V9GYY9 64 aa9.17□□□□□ -0.94
ATG4B-220ENST00000482507 SPRR1BP22528 89 aa9.16□□□□□ -0.94
ATG4B-220ENST00000482507 C9orf163Q8N9P6 203 aa9.16□□□□□ -0.94
ATG4B-220ENST00000482507 H0Y9J4 135 aa9.15□□□□□ -0.94
ATG4B-220ENST00000482507 KRTAP29-1A8MX34 341 aaPredicted RBP9.14□□□□□ -0.95
ATG4B-220ENST00000482507 C14orf177Q52M58 125 aa9.14□□□□□ -0.95
ATG4B-220ENST00000482507 MPLKIPQ8TAP9 179 aa9.14□□□□□ -0.95
ATG4B-220ENST00000482507 Q6ZR54 194 aa9.13□□□□□ -0.95
ATG4B-220ENST00000482507 hDV103S1A0JD37 113 aa9.12□□□□□ -0.95
ATG4B-220ENST00000482507 KMT2CQ8NEZ4 4911 aaKnown RBP9.12□□□□□ -0.95
ATG4B-220ENST00000482507 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
ATG4B-220ENST00000482507 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
ATG4B-220ENST00000482507 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
ATG4B-220ENST00000482507 C1orf64Q8NEQ6 169 aa9.1□□□□□ -0.95
ATG4B-220ENST00000482507 PRR4Q16378 134 aa9.1□□□□□ -0.95
ATG4B-220ENST00000482507 PRR15Q8IV56 129 aa9.09□□□□□ -0.95
ATG4B-220ENST00000482507 SACSQ9NZJ4 4579 aa9.09□□□□□ -0.95
ATG4B-220ENST00000482507 ALMS1Q8TCU4 4167 aa9.08□□□□□ -0.96
ATG4B-220ENST00000482507 C1orf134Q5TEV5 83 aa9.07□□□□□ -0.96
ATG4B-220ENST00000482507 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.07□□□□□ -0.96
ATG4B-220ENST00000482507 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
ATG4B-220ENST00000482507 A8MWP4 228 aa9.06□□□□□ -0.96
ATG4B-220ENST00000482507 LINC00208Q96KT6 92 aa9.04□□□□□ -0.96
ATG4B-220ENST00000482507 PKIGQ9Y2B9 76 aa9.04□□□□□ -0.96
ATG4B-220ENST00000482507 TRAV22A0A0B4J277 110 aa9.04□□□□□ -0.96
ATG4B-220ENST00000482507 CYP4F30PQ9H0H9 118 aa9.03□□□□□ -0.96
ATG4B-220ENST00000482507 MP68P56378 58 aa9.03□□□□□ -0.96
ATG4B-220ENST00000482507 C1orf195Q5TG92 126 aa9.02□□□□□ -0.97
ATG4B-220ENST00000482507 FRAS1Q86XX4 4008 aa9.02□□□□□ -0.97
ATG4B-220ENST00000482507 SPACA4Q8TDM5 124 aa9.02□□□□□ -0.97
ATG4B-220ENST00000482507 A0A087WTM6 91 aa9.01□□□□□ -0.97
ATG4B-220ENST00000482507 H0Y9P7 68 aa9.01□□□□□ -0.97
ATG4B-220ENST00000482507 RTL8CO15255 209 aa9.01□□□□□ -0.97
ATG4B-220ENST00000482507 IGLV9-49A0A0B4J1Y8 123 aa9□□□□□ -0.97
ATG4B-220ENST00000482507 MMP24-AS1A0A0U1RRL7 71 aa9□□□□□ -0.97
ATG4B-220ENST00000482507 Q96NJ1 140 aa9□□□□□ -0.97
ATG4B-220ENST00000482507 HECTD4Q9Y4D8 3996 aa8.99□□□□□ -0.97
ATG4B-220ENST00000482507 DNAH17Q9UFH2 4485 aa8.99□□□□□ -0.97
ATG4B-220ENST00000482507 DNAH6Q9C0G6 4158 aa8.99□□□□□ -0.97
ATG4B-220ENST00000482507 NDUFB1O75438 58 aa8.98□□□□□ -0.97
ATG4B-220ENST00000482507 BRK1Q8WUW1 75 aa8.98□□□□□ -0.97
ATG4B-220ENST00000482507 RYR2Q92736 4967 aa8.98□□□□□ -0.97
ATG4B-220ENST00000482507 FAT2Q9NYQ8 4349 aa8.96□□□□□ -0.98
ATG4B-220ENST00000482507 DNAH8Q96JB1 4490 aa8.96□□□□□ -0.98
ATG4B-220ENST00000482507 Q1T7F1 81 aa8.95□□□□□ -0.98
ATG4B-220ENST00000482507 MOBPQ13875 183 aa8.94□□□□□ -0.98
ATG4B-220ENST00000482507 LINC00483Q53H64 154 aa8.94□□□□□ -0.98
ATG4B-220ENST00000482507 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
ATG4B-220ENST00000482507 RYR3Q15413 4870 aa8.93□□□□□ -0.98
ATG4B-220ENST00000482507 H3BPC8 53 aa8.92□□□□□ -0.98
ATG4B-220ENST00000482507 KRTAP10-2P60368 255 aa8.92□□□□□ -0.98
ATG4B-220ENST00000482507 PSORS1C2Q9UIG4 136 aa8.92□□□□□ -0.98
ATG4B-220ENST00000482507 ASB16-AS1Q495Z4 193 aa8.91□□□□□ -0.98
ATG4B-220ENST00000482507 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
ATG4B-220ENST00000482507 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.99
ATG4B-220ENST00000482507 PSPHP1O15172 72 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms