RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 OBSCN-AS1Q96MR7 158 aa7.42□□□□□ -1.22
HPS4-212ENST00000481910 TLX1NBP0CAT3 122 aa7.41□□□□□ -1.22
HPS4-212ENST00000481910 COX17Q14061 63 aa7.41□□□□□ -1.22
HPS4-212ENST00000481910 Q6ZRP5 223 aa7.41□□□□□ -1.22
HPS4-212ENST00000481910 LINC00337Q8N6G1 96 aa7.41□□□□□ -1.22
HPS4-212ENST00000481910 FAT2Q9NYQ8 4349 aa7.41□□□□□ -1.22
HPS4-212ENST00000481910 IGKV2-24A0A0C4DH68 120 aa7.4□□□□□ -1.22
HPS4-212ENST00000481910 LINC00158P58513 81 aa7.4□□□□□ -1.22
HPS4-212ENST00000481910 CYP4F30PQ9H0H9 118 aa7.4□□□□□ -1.22
HPS4-212ENST00000481910 A0A096LNI7 61 aa7.4□□□□□ -1.23
HPS4-212ENST00000481910 TRAV23DV6A0A075B6W5 121 aa7.39□□□□□ -1.23
HPS4-212ENST00000481910 A0A087X002 238 aa7.39□□□□□ -1.23
HPS4-212ENST00000481910 A0A0J9YXY3 114 aa7.39□□□□□ -1.23
HPS4-212ENST00000481910 CHTF8P0CG12 524 aa7.39□□□□□ -1.23
HPS4-212ENST00000481910 hDV103S1A0JD37 113 aa7.39□□□□□ -1.23
HPS4-212ENST00000481910 LINC00846Q9NV44 126 aa7.39□□□□□ -1.23
HPS4-212ENST00000481910 CLEC2BQ92478 149 aa7.38□□□□□ -1.23
HPS4-212ENST00000481910 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.38□□□□□ -1.23
HPS4-212ENST00000481910 PANO1I0J062 215 aa7.37□□□□□ -1.23
HPS4-212ENST00000481910 ASB16-AS1Q495Z4 193 aa7.37□□□□□ -1.23
HPS4-212ENST00000481910 ADAMTSL4-AS1Q5T5F5 129 aa7.37□□□□□ -1.23
HPS4-212ENST00000481910 XAGE1AQ9HD64 81 aa7.37□□□□□ -1.23
HPS4-212ENST00000481910 PKD1P98161 4303 aa7.37□□□□□ -1.23
HPS4-212ENST00000481910 TRAV22A0A0B4J277 110 aa7.36□□□□□ -1.23
HPS4-212ENST00000481910 PRR3P79522 188 aaKnown RBP7.36□□□□□ -1.23
HPS4-212ENST00000481910 Q6ZSA8 131 aa7.36□□□□□ -1.23
HPS4-212ENST00000481910 MIR7-3HGQ8N6C7 128 aa7.36□□□□□ -1.23
HPS4-212ENST00000481910 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
HPS4-212ENST00000481910 SND1-IT1Q9HBX3 110 aa7.36□□□□□ -1.23
HPS4-212ENST00000481910 C9orf129Q5T035 196 aaKnown RBP7.35□□□□□ -1.23
HPS4-212ENST00000481910 TRBV7-4A0A0J9YYF1 115 aa7.35□□□□□ -1.23
HPS4-212ENST00000481910 LITAFQ99732 161 aa7.34□□□□□ -1.23
HPS4-212ENST00000481910 SNURFQ9Y675 71 aa7.34□□□□□ -1.23
HPS4-212ENST00000481910 A0A087WYN8 130 aa7.33□□□□□ -1.24
HPS4-212ENST00000481910 C22orf24Q9Y442 160 aa7.33□□□□□ -1.24
HPS4-212ENST00000481910 FAM168BA1KXE4 195 aa7.33□□□□□ -1.24
HPS4-212ENST00000481910 PSPHP1O15172 72 aa7.33□□□□□ -1.24
HPS4-212ENST00000481910 HAMPP81172 84 aa7.33□□□□□ -1.24
HPS4-212ENST00000481910 NOTCH2NLQ7Z3S9 236 aa7.33□□□□□ -1.24
HPS4-212ENST00000481910 A0A1W2PNN7 141 aa7.32□□□□□ -1.24
HPS4-212ENST00000481910 CIRBP-AS1Q8TBR5 109 aa7.32□□□□□ -1.24
HPS4-212ENST00000481910 LIMD2Q9BT23 127 aa7.32□□□□□ -1.24
HPS4-212ENST00000481910 SCXQ7RTU7 201 aa7.31□□□□□ -1.24
HPS4-212ENST00000481910 DNAH11Q96DT5 4516 aa7.31□□□□□ -1.24
HPS4-212ENST00000481910 TMEM254Q8TBM7 123 aa7.31□□□□□ -1.24
HPS4-212ENST00000481910 HCG22E2RYF7 251 aa7.3□□□□□ -1.24
HPS4-212ENST00000481910 C6orf99Q4VX62 202 aa7.3□□□□□ -1.24
HPS4-212ENST00000481910 PLAC8Q9NZF1 115 aa7.3□□□□□ -1.24
HPS4-212ENST00000481910 LINC00308Q8TCZ7 52 aa7.29□□□□□ -1.24
HPS4-212ENST00000481910 UBL5Q9BZL1 73 aa7.29□□□□□ -1.24
HPS4-212ENST00000481910 KRTAP7-1Q8IUC3 87 aa7.29□□□□□ -1.24
HPS4-212ENST00000481910 CDK2AP2O75956 126 aa7.28□□□□□ -1.24
HPS4-212ENST00000481910 LCE2AQ5TA79 106 aaPredicted RBP7.28□□□□□ -1.24
HPS4-212ENST00000481910 HECTD4Q9Y4D8 3996 aa7.28□□□□□ -1.24
HPS4-212ENST00000481910 PKHD1P08F94 4074 aa7.28□□□□□ -1.24
HPS4-212ENST00000481910 IGHV6-1A0A0B4J1U7 121 aa7.27□□□□□ -1.25
HPS4-212ENST00000481910 Q75L30 129 aa7.27□□□□□ -1.25
HPS4-212ENST00000481910 Q8NDZ9 215 aa7.27□□□□□ -1.25
HPS4-212ENST00000481910 JMJD7-PLA2G4BH0Y9G9 81 aa7.26□□□□□ -1.25
HPS4-212ENST00000481910 Q5VV11 94 aa7.26□□□□□ -1.25
HPS4-212ENST00000481910 SPTSSBQ8NFR3 76 aa7.25□□□□□ -1.25
HPS4-212ENST00000481910 CDC42SE1Q9NRR8 79 aa7.25□□□□□ -1.25
HPS4-212ENST00000481910 DNAH5Q8TE73 4624 aa7.25□□□□□ -1.25
HPS4-212ENST00000481910 EPPK1P58107 5090 aaKnown RBP7.25□□□□□ -1.25
HPS4-212ENST00000481910 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
HPS4-212ENST00000481910 SMR3BP02814 79 aaPredicted RBP7.24□□□□□ -1.25
HPS4-212ENST00000481910 NCR3O14931 201 aa7.23□□□□□ -1.25
HPS4-212ENST00000481910 C7orf33Q8WU49 177 aa7.23□□□□□ -1.25
HPS4-212ENST00000481910 LINC00167Q96N53 147 aa7.23□□□□□ -1.25
HPS4-212ENST00000481910 CHKB-CPT1BH3BT56 60 aa7.22□□□□□ -1.25
HPS4-212ENST00000481910 RPL37AP8A6NKH3 93 aa7.21□□□□□ -1.25
HPS4-212ENST00000481910 H0YGX0 51 aa7.21□□□□□ -1.25
HPS4-212ENST00000481910 C14orf132Q9NPU4 83 aa7.21□□□□□ -1.25
HPS4-212ENST00000481910 IGKV2-28A0A075B6P5 120 aa7.2□□□□□ -1.26
HPS4-212ENST00000481910 IGKV2D-28P01615 120 aa7.2□□□□□ -1.26
HPS4-212ENST00000481910 LRP1BQ9NZR2 4599 aa7.2□□□□□ -1.26
HPS4-212ENST00000481910 NREPQ16612 68 aa7.19□□□□□ -1.26
HPS4-212ENST00000481910 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
HPS4-212ENST00000481910 DYNC1H1Q14204 4646 aaKnown RBP7.19□□□□□ -1.26
HPS4-212ENST00000481910 IGLV1-50A0A075B6I6 118 aa7.19□□□□□ -1.26
HPS4-212ENST00000481910 A0A1B0GW54 56 aa7.19□□□□□ -1.26
HPS4-212ENST00000481910 C1orf64Q8NEQ6 169 aa7.19□□□□□ -1.26
HPS4-212ENST00000481910 ZNF706Q9Y5V0 76 aaPredicted RBP7.19□□□□□ -1.26
HPS4-212ENST00000481910 LOC101927531A0A1B0GV80 90 aa7.17□□□□□ -1.26
HPS4-212ENST00000481910 PSORS1C2Q9UIG4 136 aa7.17□□□□□ -1.26
HPS4-212ENST00000481910 IGLV6-57P01721 117 aa7.16□□□□□ -1.26
HPS4-212ENST00000481910 RPL37AP61513 92 aaKnown RBP7.15□□□□□ -1.26
HPS4-212ENST00000481910 C1orf137Q5JT78 98 aa7.15□□□□□ -1.27
HPS4-212ENST00000481910 ELOF1P60002 83 aaKnown RBP7.14□□□□□ -1.27
HPS4-212ENST00000481910 REG3GQ6UW15 175 aa7.14□□□□□ -1.27
HPS4-212ENST00000481910 Q8N1X5 172 aa7.14□□□□□ -1.27
HPS4-212ENST00000481910 KCNQ1DNQ9H478 68 aa7.14□□□□□ -1.27
HPS4-212ENST00000481910 Q5VSD8 79 aa7.13□□□□□ -1.27
HPS4-212ENST00000481910 KRTAP17-1Q9BYP8 105 aa7.13□□□□□ -1.27
HPS4-212ENST00000481910 DNAH8Q96JB1 4490 aa7.12□□□□□ -1.27
HPS4-212ENST00000481910 ORMDL1Q9P0S3 153 aa7.12□□□□□ -1.27
HPS4-212ENST00000481910 KIAA1109Q2LD37 5005 aa7.12□□□□□ -1.27
HPS4-212ENST00000481910 LINC01547P58512 204 aaPredicted RBP7.11□□□□□ -1.27
HPS4-212ENST00000481910 PDE6GP18545 87 aa7.11□□□□□ -1.27
HPS4-212ENST00000481910 MOBPQ13875 183 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms