RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 A0A087WTM6 91 aa11.56□□□□□ -0.56
MRPL28-209ENST00000481453 Q8NBF4 154 aa11.56□□□□□ -0.56
MRPL28-209ENST00000481453 KMT2AQ03164 3969 aa11.54□□□□□ -0.56
MRPL28-209ENST00000481453 PANO1I0J062 215 aa11.54□□□□□ -0.56
MRPL28-209ENST00000481453 NDUFC1O43677 76 aa11.54□□□□□ -0.56
MRPL28-209ENST00000481453 TMEM254Q8TBM7 123 aa11.53□□□□□ -0.56
MRPL28-209ENST00000481453 KRTAP11-1Q8IUC1 163 aa11.52□□□□□ -0.56
MRPL28-209ENST00000481453 PHF5AQ7RTV0 110 aaKnown RBP11.52□□□□□ -0.57
MRPL28-209ENST00000481453 SPRR4Q96PI1 79 aa11.52□□□□□ -0.57
MRPL28-209ENST00000481453 OCR1Q9BZK8 76 aa11.52□□□□□ -0.57
MRPL28-209ENST00000481453 PKIGQ9Y2B9 76 aa11.52□□□□□ -0.57
MRPL28-209ENST00000481453 C5orf47Q569G3 176 aa11.51□□□□□ -0.57
MRPL28-209ENST00000481453 SERP1Q9Y6X1 66 aa11.51□□□□□ -0.57
MRPL28-209ENST00000481453 DNAH2Q9P225 4427 aa11.5□□□□□ -0.57
MRPL28-209ENST00000481453 SMIM29Q86T20 159 aa11.48□□□□□ -0.57
MRPL28-209ENST00000481453 LINC00474Q9P2X8 69 aa11.48□□□□□ -0.57
MRPL28-209ENST00000481453 LY6G6CO95867 125 aa11.47□□□□□ -0.57
MRPL28-209ENST00000481453 WWC2-AS2Q96NR7 200 aa11.47□□□□□ -0.57
MRPL28-209ENST00000481453 LINC00476Q8WZB0 136 aa11.47□□□□□ -0.57
MRPL28-209ENST00000481453 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
MRPL28-209ENST00000481453 PRLHP81277 87 aa11.45□□□□□ -0.58
MRPL28-209ENST00000481453 C1orf134Q5TEV5 83 aa11.45□□□□□ -0.58
MRPL28-209ENST00000481453 SPACA4Q8TDM5 124 aa11.45□□□□□ -0.58
MRPL28-209ENST00000481453 EPM2AB3EWF7 344 aa11.45□□□□□ -0.58
MRPL28-209ENST00000481453 Q5XG85 94 aa11.45□□□□□ -0.58
MRPL28-209ENST00000481453 RTL8CO15255 209 aa11.44□□□□□ -0.58
MRPL28-209ENST00000481453 TGP01266 2768 aa11.43□□□□□ -0.58
MRPL28-209ENST00000481453 A0A0U1RQV1 116 aa11.43□□□□□ -0.58
MRPL28-209ENST00000481453 C4orf26Q17RF5 130 aa11.43□□□□□ -0.58
MRPL28-209ENST00000481453 DNAH6Q9C0G6 4158 aa11.43□□□□□ -0.58
MRPL28-209ENST00000481453 DNAH17Q9UFH2 4485 aa11.43□□□□□ -0.58
MRPL28-209ENST00000481453 DSCR10P59022 87 aa11.43□□□□□ -0.58
MRPL28-209ENST00000481453 FAM30AQ9NZY2 134 aa11.43□□□□□ -0.58
MRPL28-209ENST00000481453 A0A0G2JQZ4 141 aa11.42□□□□□ -0.58
MRPL28-209ENST00000481453 HIGD2AQ9BW72 106 aa11.41□□□□□ -0.58
MRPL28-209ENST00000481453 ATP5EP56381 51 aaPredicted RBP11.41□□□□□ -0.58
MRPL28-209ENST00000481453 IGFL1Q6UW32 110 aa11.41□□□□□ -0.58
MRPL28-209ENST00000481453 HECTD4Q9Y4D8 3996 aa11.41□□□□□ -0.58
MRPL28-209ENST00000481453 K7EQZ3 153 aa11.4□□□□□ -0.58
MRPL28-209ENST00000481453 ALMS1Q8TCU4 4167 aa11.37□□□□□ -0.59
MRPL28-209ENST00000481453 H0Y9J4 135 aa11.37□□□□□ -0.59
MRPL28-209ENST00000481453 HRCT1Q6UXD1 115 aa11.36□□□□□ -0.59
MRPL28-209ENST00000481453 IGLV8-61A0A075B6I0 122 aa11.35□□□□□ -0.59
MRPL28-209ENST00000481453 UBE2AP49459 152 aa11.35□□□□□ -0.59
MRPL28-209ENST00000481453 IGLV5-52A0A0A0MRZ9 124 aa11.33□□□□□ -0.59
MRPL28-209ENST00000481453 KRTAP13-1Q8IUC0 172 aa11.33□□□□□ -0.6
MRPL28-209ENST00000481453 A0A087WSZ3 146 aa11.32□□□□□ -0.6
MRPL28-209ENST00000481453 DEFB116Q30KQ4 102 aa11.32□□□□□ -0.6
MRPL28-209ENST00000481453 SMIM26A0A096LP01 95 aa11.32□□□□□ -0.6
MRPL28-209ENST00000481453 HCG22E2RYF7 251 aa11.31□□□□□ -0.6
MRPL28-209ENST00000481453 LCE6AA0A183 80 aa11.31□□□□□ -0.6
MRPL28-209ENST00000481453 PLAC8Q9NZF1 115 aa11.3□□□□□ -0.6
MRPL28-209ENST00000481453 FRAS1Q86XX4 4008 aa11.27□□□□□ -0.6
MRPL28-209ENST00000481453 FP248Q71RG6 208 aaPredicted RBP11.27□□□□□ -0.61
MRPL28-209ENST00000481453 SPRR1BP22528 89 aa11.27□□□□□ -0.61
MRPL28-209ENST00000481453 KRTAP10-2P60368 255 aa11.25□□□□□ -0.61
MRPL28-209ENST00000481453 WFDC13Q8IUB5 93 aa11.23□□□□□ -0.61
MRPL28-209ENST00000481453 DNAH11Q96DT5 4516 aa11.22□□□□□ -0.61
MRPL28-209ENST00000481453 HYDINQ4G0P3 5121 aa11.22□□□□□ -0.61
MRPL28-209ENST00000481453 RPL37AP61513 92 aaKnown RBP11.22□□□□□ -0.61
MRPL28-209ENST00000481453 DNAH8Q96JB1 4490 aa11.22□□□□□ -0.61
MRPL28-209ENST00000481453 PSORS1C2Q9UIG4 136 aa11.21□□□□□ -0.61
MRPL28-209ENST00000481453 ZCCHC13Q8WW36 166 aaKnown RBP11.21□□□□□ -0.62
MRPL28-209ENST00000481453 SRRM2Q9UQ35 2752 aaKnown RBP11.21□□□□□ -0.62
MRPL28-209ENST00000481453 FAM229BQ4G0N7 80 aa11.19□□□□□ -0.62
MRPL28-209ENST00000481453 DNAH5Q8TE73 4624 aa11.18□□□□□ -0.62
MRPL28-209ENST00000481453 FAT2Q9NYQ8 4349 aa11.16□□□□□ -0.62
MRPL28-209ENST00000481453 PRR15Q8IV56 129 aa11.14□□□□□ -0.63
MRPL28-209ENST00000481453 LINC00472Q9H8W2 130 aa11.13□□□□□ -0.63
MRPL28-209ENST00000481453 PKD1P98161 4303 aa11.13□□□□□ -0.63
MRPL28-209ENST00000481453 KRTAP29-1A8MX34 341 aaPredicted RBP11.13□□□□□ -0.63
MRPL28-209ENST00000481453 A8MWP4 228 aa11.12□□□□□ -0.63
MRPL28-209ENST00000481453 MP68P56378 58 aa11.12□□□□□ -0.63
MRPL28-209ENST00000481453 CASC2Q6XLA1 102 aa11.12□□□□□ -0.63
MRPL28-209ENST00000481453 MPLKIPQ8TAP9 179 aa11.11□□□□□ -0.63
MRPL28-209ENST00000481453 CIRBP-AS1Q8TBR5 109 aa11.11□□□□□ -0.63
MRPL28-209ENST00000481453 ZNF861PO60384 105 aa11.11□□□□□ -0.63
MRPL28-209ENST00000481453 KRTAP10-1P60331 282 aa11.11□□□□□ -0.63
MRPL28-209ENST00000481453 LINC00483Q53H64 154 aa11.11□□□□□ -0.63
MRPL28-209ENST00000481453 Q6ZSA8 131 aa11.1□□□□□ -0.63
MRPL28-209ENST00000481453 LINC00336Q6ZUF6 198 aa11.09□□□□□ -0.63
MRPL28-209ENST00000481453 hDV103S1A0JD37 113 aa11.09□□□□□ -0.63
MRPL28-209ENST00000481453 NDUFB1O75438 58 aa11.07□□□□□ -0.64
MRPL28-209ENST00000481453 C1orf64Q8NEQ6 169 aa11.07□□□□□ -0.64
MRPL28-209ENST00000481453 LINC00208Q96KT6 92 aa11.06□□□□□ -0.64
MRPL28-209ENST00000481453 IGLV9-49A0A0B4J1Y8 123 aa11.05□□□□□ -0.64
MRPL28-209ENST00000481453 IGLV7-43P04211 117 aa11.05□□□□□ -0.64
MRPL28-209ENST00000481453 ZNF706Q9Y5V0 76 aaPredicted RBP11.05□□□□□ -0.64
MRPL28-209ENST00000481453 SACSQ9NZJ4 4579 aa11.05□□□□□ -0.64
MRPL28-209ENST00000481453 PRR4Q16378 134 aa11.04□□□□□ -0.64
MRPL28-209ENST00000481453 PRO0628Q9UI54 55 aa11.04□□□□□ -0.64
MRPL28-209ENST00000481453 TRAV22A0A0B4J277 110 aa11.04□□□□□ -0.64
MRPL28-209ENST00000481453 H0Y9P7 68 aa11.03□□□□□ -0.64
MRPL28-209ENST00000481453 CYP4F30PQ9H0H9 118 aa11.02□□□□□ -0.65
MRPL28-209ENST00000481453 ANAPC11Q9NYG5 84 aa11.01□□□□□ -0.65
MRPL28-209ENST00000481453 H3BPC8 53 aa10.99□□□□□ -0.65
MRPL28-209ENST00000481453 MMP24-AS1A0A0U1RRL7 71 aa10.99□□□□□ -0.65
MRPL28-209ENST00000481453 Q96NJ1 140 aa10.96□□□□□ -0.66
MRPL28-209ENST00000481453 MOBPQ13875 183 aa10.94□□□□□ -0.66
MRPL28-209ENST00000481453 LRP1BQ9NZR2 4599 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms