RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 HIST1H2BBP33778 126 aa4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 HIST1H2BDP58876 126 aa4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 HIST1H2BCP62807 126 aa4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 HIST2H2BEQ16778 126 aa4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 COPS9Q8WXC6 57 aa4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 HIST1H2BHQ93079 126 aa4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 HIST1H2BNQ99877 126 aa4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 HIST1H2BMQ99879 126 aa4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 NHP2Q9NX24 153 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 TMA7Q9Y2S6 64 aaKnown RBP4.88□□□□□ -1.63
SMARCE1-210ENST00000481231 F8WEM9 126 aa4.87□□□□□ -1.63
SMARCE1-210ENST00000481231 C3orf79P0CE67 100 aa4.87□□□□□ -1.63
SMARCE1-210ENST00000481231 ANKRD39Q53RE8 183 aa4.87□□□□□ -1.63
SMARCE1-210ENST00000481231 MUSTN1Q8IVN3 82 aa4.87□□□□□ -1.63
SMARCE1-210ENST00000481231 SMIM11BQ8TCY0 68 aa4.87□□□□□ -1.63
SMARCE1-210ENST00000481231 OBSCN-AS1Q96MR7 158 aa4.87□□□□□ -1.63
SMARCE1-210ENST00000481231 MT2AP02795 61 aa4.86□□□□□ -1.63
SMARCE1-210ENST00000481231 Q6ZVH6 145 aa4.86□□□□□ -1.63
SMARCE1-210ENST00000481231 Q75L30 129 aa4.86□□□□□ -1.63
SMARCE1-210ENST00000481231 PCP2Q8IVA1 136 aa4.86□□□□□ -1.63
SMARCE1-210ENST00000481231 TRAV13-2A0A0B4J235 113 aa4.85□□□□□ -1.63
SMARCE1-210ENST00000481231 TRBV7-7A0A0K0K1E9 115 aa4.85□□□□□ -1.63
SMARCE1-210ENST00000481231 KRTDAPP60985 99 aa4.85□□□□□ -1.63
SMARCE1-210ENST00000481231 ATP11AUNQ6ZP68 121 aa4.85□□□□□ -1.63
SMARCE1-210ENST00000481231 MT1FP04733 61 aa4.84□□□□□ -1.63
SMARCE1-210ENST00000481231 KRTAP20-1Q3LI63 56 aa4.84□□□□□ -1.63
SMARCE1-210ENST00000481231 Q6JHZ5 121 aa4.84□□□□□ -1.63
SMARCE1-210ENST00000481231 CLEC2BQ92478 149 aa4.84□□□□□ -1.63
SMARCE1-210ENST00000481231 KRTAP9-3Q9BYQ3 159 aa4.84□□□□□ -1.63
SMARCE1-210ENST00000481231 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
SMARCE1-210ENST00000481231 IGFL1Q6UW32 110 aa4.83□□□□□ -1.64
SMARCE1-210ENST00000481231 LINC00575Q6W349 94 aa4.83□□□□□ -1.64
SMARCE1-210ENST00000481231 Q6ZQY7 126 aa4.83□□□□□ -1.64
SMARCE1-210ENST00000481231 SLC7A5P1Q8MH63 180 aa4.83□□□□□ -1.64
SMARCE1-210ENST00000481231 ATOH7Q8N100 152 aa4.83□□□□□ -1.64
SMARCE1-210ENST00000481231 C20orf202A1L168 122 aa4.81□□□□□ -1.64
SMARCE1-210ENST00000481231 VAMP3Q15836 100 aa4.81□□□□□ -1.64
SMARCE1-210ENST00000481231 OCIAD2Q56VL3 154 aa4.81□□□□□ -1.64
SMARCE1-210ENST00000481231 hADV29S1A0JD25 119 aa4.8□□□□□ -1.64
SMARCE1-210ENST00000481231 COA6Q5JTJ3 125 aaKnown RBP4.8□□□□□ -1.64
SMARCE1-210ENST00000481231 Q96NJ1 140 aa4.8□□□□□ -1.64
SMARCE1-210ENST00000481231 LINC00846Q9NV44 126 aa4.8□□□□□ -1.64
SMARCE1-210ENST00000481231 H3BUT2 72 aa4.78□□□□□ -1.64
SMARCE1-210ENST00000481231 LST1O00453 97 aa4.78□□□□□ -1.64
SMARCE1-210ENST00000481231 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
SMARCE1-210ENST00000481231 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
SMARCE1-210ENST00000481231 A8MUU9 505 aa4.77□□□□□ -1.65
SMARCE1-210ENST00000481231 KRTAP10-10P60014 251 aa4.77□□□□□ -1.65
SMARCE1-210ENST00000481231 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.77□□□□□ -1.65
SMARCE1-210ENST00000481231 SNHG12Q9BXW3 62 aa4.76□□□□□ -1.65
SMARCE1-210ENST00000481231 TRBV20-1A0A075B6N2 111 aa4.75□□□□□ -1.65
SMARCE1-210ENST00000481231 PPDPFLQ8WWR9 84 aa4.75□□□□□ -1.65
SMARCE1-210ENST00000481231 SS18L2Q9UHA2 77 aa4.74□□□□□ -1.65
SMARCE1-210ENST00000481231 SCGB1D1O95968 90 aa4.73□□□□□ -1.65
SMARCE1-210ENST00000481231 SNRPEP62304 92 aaKnown RBP4.73□□□□□ -1.65
SMARCE1-210ENST00000481231 C12orf57Q99622 126 aa4.73□□□□□ -1.65
SMARCE1-210ENST00000481231 DSCR10P59022 87 aa4.71□□□□□ -1.66
SMARCE1-210ENST00000481231 BVES-AS1Q5T3Y7 98 aa4.71□□□□□ -1.66
SMARCE1-210ENST00000481231 A0A087WSZ3 146 aa4.7□□□□□ -1.66
SMARCE1-210ENST00000481231 KRTAP16-1A8MUX0 517 aa4.7□□□□□ -1.66
SMARCE1-210ENST00000481231 TEN1Q86WV5 123 aa4.7□□□□□ -1.66
SMARCE1-210ENST00000481231 FAM236DA0A1B0GTK5 79 aa4.69□□□□□ -1.66
SMARCE1-210ENST00000481231 FAM236CP0DP71 79 aa4.69□□□□□ -1.66
SMARCE1-210ENST00000481231 HSBP1L1C9JCN9 74 aa4.68□□□□□ -1.66
SMARCE1-210ENST00000481231 NDUFV3P56181 108 aaKnown RBP4.68□□□□□ -1.66
SMARCE1-210ENST00000481231 MPLKIPQ8TAP9 179 aa4.68□□□□□ -1.66
SMARCE1-210ENST00000481231 HIST1H4GQ99525 98 aa4.68□□□□□ -1.66
SMARCE1-210ENST00000481231 SIGMAR1Q99720 223 aa4.68□□□□□ -1.66
SMARCE1-210ENST00000481231 KRTAP4-8Q9BYQ9 185 aa4.68□□□□□ -1.66
SMARCE1-210ENST00000481231 HRES1P13985 223 aa4.66□□□□□ -1.66
SMARCE1-210ENST00000481231 FAM218AQ96MZ4 157 aa4.66□□□□□ -1.66
SMARCE1-210ENST00000481231 HIST1H2BLQ99880 126 aa4.66□□□□□ -1.66
SMARCE1-210ENST00000481231 H3BMG7 143 aa4.65□□□□□ -1.67
SMARCE1-210ENST00000481231 HIST3H2BBQ8N257 126 aa4.65□□□□□ -1.67
SMARCE1-210ENST00000481231 A0A1W2PNM2 257 aa4.64□□□□□ -1.67
SMARCE1-210ENST00000481231 SNCGO76070 127 aa4.64□□□□□ -1.67
SMARCE1-210ENST00000481231 LINC00313P59037 77 aa4.64□□□□□ -1.67
SMARCE1-210ENST00000481231 RBM12B-AS1Q9P1G2 102 aa4.64□□□□□ -1.67
SMARCE1-210ENST00000481231 H0YGX0 51 aa4.63□□□□□ -1.67
SMARCE1-210ENST00000481231 FABP2P12104 132 aa4.63□□□□□ -1.67
SMARCE1-210ENST00000481231 S100A2P29034 98 aa4.63□□□□□ -1.67
SMARCE1-210ENST00000481231 NOTCH2NLQ7Z3S9 236 aa4.63□□□□□ -1.67
SMARCE1-210ENST00000481231 IGKV4-1P06312 121 aa4.62□□□□□ -1.67
SMARCE1-210ENST00000481231 COX8AP10176 69 aa4.62□□□□□ -1.67
SMARCE1-210ENST00000481231 RAB37Q96AX2 223 aa4.62□□□□□ -1.67
SMARCE1-210ENST00000481231 H3BS24 57 aa4.61□□□□□ -1.67
SMARCE1-210ENST00000481231 A0A0B4J2C4 111 aa4.6□□□□□ -1.67
SMARCE1-210ENST00000481231 DLEU1O43261 78 aa4.6□□□□□ -1.67
SMARCE1-210ENST00000481231 A0A1B0GX51 115 aa4.59□□□□□ -1.67
SMARCE1-210ENST00000481231 DEFB116Q30KQ4 102 aa4.59□□□□□ -1.67
SMARCE1-210ENST00000481231 MDN1Q9NU22 5596 aa4.59□□□□□ -1.68
SMARCE1-210ENST00000481231 IGHV6-1A0A0B4J1U7 121 aa4.58□□□□□ -1.68
SMARCE1-210ENST00000481231 TRBV7-4A0A0J9YYF1 115 aa4.58□□□□□ -1.68
SMARCE1-210ENST00000481231 A0A1B0GV72 72 aa4.58□□□□□ -1.68
SMARCE1-210ENST00000481231 LINC00472Q9H8W2 130 aa4.58□□□□□ -1.68
SMARCE1-210ENST00000481231 ANKRD29Q8N6D5 301 aa4.57□□□□□ -1.68
SMARCE1-210ENST00000481231 C14orf144Q96I85 54 aa4.57□□□□□ -1.68
SMARCE1-210ENST00000481231 C2orf91Q6ZV80 131 aa4.56□□□□□ -1.68
SMARCE1-210ENST00000481231 HIGD1BQ9P298 99 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms