RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 C16orf90A8MZG2 172 aa5.44□□□□□ -1.54
VAPB-205ENST00000476395 WFDC10BQ8IUB3 73 aa5.44□□□□□ -1.54
VAPB-205ENST00000476395 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.44□□□□□ -1.54
VAPB-205ENST00000476395 KRTAP24-1Q3LI83 254 aa5.43□□□□□ -1.54
VAPB-205ENST00000476395 PLA2G2DQ9UNK4 145 aa5.43□□□□□ -1.54
VAPB-205ENST00000476395 K7EQZ3 153 aa5.42□□□□□ -1.54
VAPB-205ENST00000476395 SRRM2Q9UQ35 2752 aaKnown RBP5.42□□□□□ -1.54
VAPB-205ENST00000476395 PSCAO43653 123 aa5.42□□□□□ -1.54
VAPB-205ENST00000476395 A6NED7 52 aa5.41□□□□□ -1.54
VAPB-205ENST00000476395 Q5VV11 94 aa5.41□□□□□ -1.54
VAPB-205ENST00000476395 ZCCHC13Q8WW36 166 aaKnown RBP5.41□□□□□ -1.54
VAPB-205ENST00000476395 A0A1W2PNM2 257 aa5.41□□□□□ -1.54
VAPB-205ENST00000476395 KRTAP7-1Q8IUC3 87 aa5.41□□□□□ -1.54
VAPB-205ENST00000476395 DNHD1Q96M86 4753 aa5.41□□□□□ -1.54
VAPB-205ENST00000476395 IGHV6-1A0A0B4J1U7 121 aa5.4□□□□□ -1.54
VAPB-205ENST00000476395 Q8N377 158 aa5.4□□□□□ -1.54
VAPB-205ENST00000476395 HTN3P15516 51 aa5.4□□□□□ -1.55
VAPB-205ENST00000476395 KRTAP10-11P60412 298 aa5.4□□□□□ -1.55
VAPB-205ENST00000476395 DYNC2H1Q8NCM8 4307 aaKnown RBP5.4□□□□□ -1.55
VAPB-205ENST00000476395 RETNLBQ9BQ08 111 aa5.4□□□□□ -1.55
VAPB-205ENST00000476395 SPART-AS1P0CW21 52 aa5.39□□□□□ -1.55
VAPB-205ENST00000476395 DSCR10P59022 87 aa5.39□□□□□ -1.55
VAPB-205ENST00000476395 KPRPQ5T749 579 aaPredicted RBP5.39□□□□□ -1.55
VAPB-205ENST00000476395 COL7A1Q02388 2944 aa5.38□□□□□ -1.55
VAPB-205ENST00000476395 LCE6AA0A183 80 aa5.38□□□□□ -1.55
VAPB-205ENST00000476395 Q75L30 129 aa5.37□□□□□ -1.55
VAPB-205ENST00000476395 KRTAP4-16G5E9R7 235 aaPredicted RBP5.37□□□□□ -1.55
VAPB-205ENST00000476395 WFDC13Q8IUB5 93 aa5.37□□□□□ -1.55
VAPB-205ENST00000476395 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
VAPB-205ENST00000476395 ETDCA0A1B0GVM5 59 aa5.36□□□□□ -1.55
VAPB-205ENST00000476395 RPL37AP8A6NKH3 93 aa5.36□□□□□ -1.55
VAPB-205ENST00000476395 EGFEM1PQ0D2K5 195 aa5.36□□□□□ -1.55
VAPB-205ENST00000476395 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
VAPB-205ENST00000476395 H3BNG1 76 aa5.35□□□□□ -1.55
VAPB-205ENST00000476395 CAMK2N2Q96S95 79 aa5.35□□□□□ -1.55
VAPB-205ENST00000476395 CASC10Q5T4H9 136 aa5.34□□□□□ -1.55
VAPB-205ENST00000476395 RPL37AP61513 92 aaKnown RBP5.34□□□□□ -1.55
VAPB-205ENST00000476395 Q9BRP9 147 aa5.34□□□□□ -1.55
VAPB-205ENST00000476395 KCNQ1DNQ9H478 68 aa5.34□□□□□ -1.55
VAPB-205ENST00000476395 C1orf137Q5JT78 98 aa5.34□□□□□ -1.56
VAPB-205ENST00000476395 LINC00208Q96KT6 92 aa5.34□□□□□ -1.56
VAPB-205ENST00000476395 FAM168BA1KXE4 195 aa5.33□□□□□ -1.56
VAPB-205ENST00000476395 Q8N9P0 234 aaPredicted RBP5.33□□□□□ -1.56
VAPB-205ENST00000476395 IGLV5-48A0A075B6I7 105 aa5.32□□□□□ -1.56
VAPB-205ENST00000476395 H3BQ85 93 aa5.32□□□□□ -1.56
VAPB-205ENST00000476395 CYP4F30PQ9H0H9 118 aa5.32□□□□□ -1.56
VAPB-205ENST00000476395 C7orf33Q8WU49 177 aa5.32□□□□□ -1.56
VAPB-205ENST00000476395 LIMD2Q9BT23 127 aa5.32□□□□□ -1.56
VAPB-205ENST00000476395 B9D2Q9BPU9 175 aa5.31□□□□□ -1.56
VAPB-205ENST00000476395 SPRR1AP35321 89 aa5.31□□□□□ -1.56
VAPB-205ENST00000476395 LINC01556Q5JQF7 62 aa5.31□□□□□ -1.56
VAPB-205ENST00000476395 PLECQ15149 4684 aaKnown RBP5.3□□□□□ -1.56
VAPB-205ENST00000476395 CASC2Q6XLA1 102 aa5.3□□□□□ -1.56
VAPB-205ENST00000476395 Q8NBF4 154 aa5.3□□□□□ -1.56
VAPB-205ENST00000476395 CDC42SE1Q9NRR8 79 aa5.3□□□□□ -1.56
VAPB-205ENST00000476395 FRAS1Q86XX4 4008 aa5.29□□□□□ -1.56
VAPB-205ENST00000476395 TLX1NBP0CAT3 122 aa5.29□□□□□ -1.56
VAPB-205ENST00000476395 HECTD4Q9Y4D8 3996 aa5.28□□□□□ -1.56
VAPB-205ENST00000476395 IGLV1-50A0A075B6I6 118 aa5.28□□□□□ -1.56
VAPB-205ENST00000476395 IGLV5-37A0A075B6J1 123 aa5.27□□□□□ -1.57
VAPB-205ENST00000476395 DNAH10OSP0CZ25 163 aa5.27□□□□□ -1.57
VAPB-205ENST00000476395 MOBPQ13875 183 aa5.27□□□□□ -1.57
VAPB-205ENST00000476395 STAB2Q8WWQ8 2551 aa5.27□□□□□ -1.57
VAPB-205ENST00000476395 Q6ZRX8 168 aa5.27□□□□□ -1.57
VAPB-205ENST00000476395 IGKV2D-24A0A075B6R9 120 aa5.25□□□□□ -1.57
VAPB-205ENST00000476395 PRKDCP78527 4128 aaKnown RBP5.25□□□□□ -1.57
VAPB-205ENST00000476395 A0A087WSZ3 146 aa5.25□□□□□ -1.57
VAPB-205ENST00000476395 H0Y9P7 68 aa5.25□□□□□ -1.57
VAPB-205ENST00000476395 PLA2G1BP04054 148 aaKnown RBP5.25□□□□□ -1.57
VAPB-205ENST00000476395 LINC00476Q8WZB0 136 aa5.25□□□□□ -1.57
VAPB-205ENST00000476395 SPRR4Q96PI1 79 aa5.25□□□□□ -1.57
VAPB-205ENST00000476395 C1orf134Q5TEV5 83 aa5.24□□□□□ -1.57
VAPB-205ENST00000476395 REG3GQ6UW15 175 aa5.24□□□□□ -1.57
VAPB-205ENST00000476395 TENM2Q9NT68 2774 aa5.24□□□□□ -1.57
VAPB-205ENST00000476395 DEFB131BA0A096LNP1 70 aa5.24□□□□□ -1.57
VAPB-205ENST00000476395 SPAG11AQ6PDA7 123 aa5.24□□□□□ -1.57
VAPB-205ENST00000476395 TGP01266 2768 aa5.23□□□□□ -1.57
VAPB-205ENST00000476395 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
VAPB-205ENST00000476395 DNAH2Q9P225 4427 aa5.23□□□□□ -1.57
VAPB-205ENST00000476395 STARD9Q9P2P6 4700 aa5.23□□□□□ -1.57
VAPB-205ENST00000476395 COA5Q86WW8 74 aa5.23□□□□□ -1.57
VAPB-205ENST00000476395 MEGF8Q7Z7M0 2845 aa5.22□□□□□ -1.57
VAPB-205ENST00000476395 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
VAPB-205ENST00000476395 DNAH8Q96JB1 4490 aa5.22□□□□□ -1.57
VAPB-205ENST00000476395 SPINK7P58062 85 aa5.22□□□□□ -1.57
VAPB-205ENST00000476395 IGFL1Q6UW32 110 aa5.22□□□□□ -1.57
VAPB-205ENST00000476395 KRTAP1-5Q9BYS1 174 aa5.22□□□□□ -1.57
VAPB-205ENST00000476395 FBN3Q75N90 2809 aa5.22□□□□□ -1.57
VAPB-205ENST00000476395 NDUFB1O75438 58 aa5.21□□□□□ -1.57
VAPB-205ENST00000476395 ADM2Q7Z4H4 148 aa5.21□□□□□ -1.57
VAPB-205ENST00000476395 KRTAP29-1A8MX34 341 aaPredicted RBP5.2□□□□□ -1.58
VAPB-205ENST00000476395 KMT2AQ03164 3969 aa5.19□□□□□ -1.58
VAPB-205ENST00000476395 CNBPP62633 177 aaKnown RBP5.19□□□□□ -1.58
VAPB-205ENST00000476395 DHRS4-AS1Q9P1J3 65 aa5.19□□□□□ -1.58
VAPB-205ENST00000476395 VPS13DQ5THJ4 4388 aa5.19□□□□□ -1.58
VAPB-205ENST00000476395 PRLHP81277 87 aa5.19□□□□□ -1.58
VAPB-205ENST00000476395 C9orf163Q8N9P6 203 aa5.19□□□□□ -1.58
VAPB-205ENST00000476395 A0A096LNI7 61 aa5.18□□□□□ -1.58
VAPB-205ENST00000476395 KRTAP16-1A8MUX0 517 aa5.18□□□□□ -1.58
VAPB-205ENST00000476395 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms