RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 K7EIL1 84 aa8.32□□□□□ -1.08
CCNL1-216ENST00000475298 C7orf33Q8WU49 177 aa8.32□□□□□ -1.08
CCNL1-216ENST00000475298 B9D2Q9BPU9 175 aa8.32□□□□□ -1.08
CCNL1-216ENST00000475298 A0A1B0GW54 56 aa8.31□□□□□ -1.08
CCNL1-216ENST00000475298 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
CCNL1-216ENST00000475298 NKAPP1Q8N9T2 125 aa8.31□□□□□ -1.08
CCNL1-216ENST00000475298 NDUFB1O75438 58 aa8.3□□□□□ -1.08
CCNL1-216ENST00000475298 COL7A1Q02388 2944 aa8.3□□□□□ -1.08
CCNL1-216ENST00000475298 A6NN06 94 aa8.3□□□□□ -1.08
CCNL1-216ENST00000475298 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
CCNL1-216ENST00000475298 RPL37AP8A6NKH3 93 aa8.29□□□□□ -1.08
CCNL1-216ENST00000475298 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
CCNL1-216ENST00000475298 ATP11AUNQ6ZP68 121 aa8.29□□□□□ -1.08
CCNL1-216ENST00000475298 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
CCNL1-216ENST00000475298 STAB2Q8WWQ8 2551 aa8.29□□□□□ -1.08
CCNL1-216ENST00000475298 TNP2Q05952 138 aa8.28□□□□□ -1.08
CCNL1-216ENST00000475298 PHF5AQ7RTV0 110 aaKnown RBP8.28□□□□□ -1.08
CCNL1-216ENST00000475298 Q8NBF4 154 aa8.27□□□□□ -1.09
CCNL1-216ENST00000475298 KCNQ1DNQ9H478 68 aa8.27□□□□□ -1.09
CCNL1-216ENST00000475298 DNAH10Q8IVF4 4471 aa8.27□□□□□ -1.09
CCNL1-216ENST00000475298 SPRR4Q96PI1 79 aa8.27□□□□□ -1.09
CCNL1-216ENST00000475298 C1orf137Q5JT78 98 aa8.26□□□□□ -1.09
CCNL1-216ENST00000475298 KRTAP7-1Q8IUC3 87 aa8.26□□□□□ -1.09
CCNL1-216ENST00000475298 NDUFS5O43920 106 aa8.26□□□□□ -1.09
CCNL1-216ENST00000475298 LINC00208Q96KT6 92 aa8.26□□□□□ -1.09
CCNL1-216ENST00000475298 TLX1NBP0CAT3 122 aa8.25□□□□□ -1.09
CCNL1-216ENST00000475298 Q75L30 129 aa8.25□□□□□ -1.09
CCNL1-216ENST00000475298 Q9BRP9 147 aa8.24□□□□□ -1.09
CCNL1-216ENST00000475298 SPANXA2-OT1Q8N9U9 137 aa8.24□□□□□ -1.09
CCNL1-216ENST00000475298 MDFIQ99750 246 aa8.24□□□□□ -1.09
CCNL1-216ENST00000475298 DEFB116Q30KQ4 102 aa8.23□□□□□ -1.09
CCNL1-216ENST00000475298 TENM2Q9NT68 2774 aa8.22□□□□□ -1.09
CCNL1-216ENST00000475298 LOC101927531A0A1B0GV80 90 aa8.22□□□□□ -1.09
CCNL1-216ENST00000475298 MP68P56378 58 aa8.22□□□□□ -1.09
CCNL1-216ENST00000475298 KRTAP1-5Q9BYS1 174 aa8.22□□□□□ -1.09
CCNL1-216ENST00000475298 IGLV1-50A0A075B6I6 118 aa8.21□□□□□ -1.09
CCNL1-216ENST00000475298 DNAH9Q9NYC9 4486 aa8.21□□□□□ -1.09
CCNL1-216ENST00000475298 A6NED7 52 aa8.21□□□□□ -1.1
CCNL1-216ENST00000475298 Q6ZRX8 168 aa8.21□□□□□ -1.1
CCNL1-216ENST00000475298 PLA2G2DQ9UNK4 145 aa8.21□□□□□ -1.1
CCNL1-216ENST00000475298 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
CCNL1-216ENST00000475298 WFDC13Q8IUB5 93 aa8.19□□□□□ -1.1
CCNL1-216ENST00000475298 CDC42SE1Q9NRR8 79 aa8.19□□□□□ -1.1
CCNL1-216ENST00000475298 IGLV5-37A0A075B6J1 123 aa8.18□□□□□ -1.1
CCNL1-216ENST00000475298 SPRR1AP35321 89 aa8.17□□□□□ -1.1
CCNL1-216ENST00000475298 C7orf65Q6ZTY9 151 aa8.17□□□□□ -1.1
CCNL1-216ENST00000475298 C9orf163Q8N9P6 203 aa8.16□□□□□ -1.1
CCNL1-216ENST00000475298 DHRS4-AS1Q9P1J3 65 aa8.16□□□□□ -1.1
CCNL1-216ENST00000475298 DNAH7Q8WXX0 4024 aa8.16□□□□□ -1.1
CCNL1-216ENST00000475298 CSMD3Q7Z407 3707 aa8.16□□□□□ -1.1
CCNL1-216ENST00000475298 IGKV2-24A0A0C4DH68 120 aa8.15□□□□□ -1.1
CCNL1-216ENST00000475298 KRTAP29-1A8MX34 341 aaPredicted RBP8.15□□□□□ -1.1
CCNL1-216ENST00000475298 MOBPQ13875 183 aa8.15□□□□□ -1.1
CCNL1-216ENST00000475298 H0Y9P7 68 aa8.15□□□□□ -1.1
CCNL1-216ENST00000475298 C4orf48Q5BLP8 95 aa8.15□□□□□ -1.1
CCNL1-216ENST00000475298 A0A096LNI7 61 aa8.14□□□□□ -1.11
CCNL1-216ENST00000475298 A0A0G2JQZ4 141 aa8.14□□□□□ -1.11
CCNL1-216ENST00000475298 A0A1W2PNN7 141 aa8.14□□□□□ -1.11
CCNL1-216ENST00000475298 COA5Q86WW8 74 aa8.13□□□□□ -1.11
CCNL1-216ENST00000475298 H3BPC8 53 aa8.12□□□□□ -1.11
CCNL1-216ENST00000475298 C8orf87E5RJ46 101 aa8.11□□□□□ -1.11
CCNL1-216ENST00000475298 REG3GQ6UW15 175 aa8.11□□□□□ -1.11
CCNL1-216ENST00000475298 UBE2DNLQ8IWF7 75 aa8.11□□□□□ -1.11
CCNL1-216ENST00000475298 PLAC8Q9NZF1 115 aa8.11□□□□□ -1.11
CCNL1-216ENST00000475298 SRRM2Q9UQ35 2752 aaKnown RBP8.1□□□□□ -1.11
CCNL1-216ENST00000475298 RPL37AP61513 92 aaKnown RBP8.1□□□□□ -1.11
CCNL1-216ENST00000475298 LINC00476Q8WZB0 136 aa8.1□□□□□ -1.11
CCNL1-216ENST00000475298 PRLHP81277 87 aa8.09□□□□□ -1.11
CCNL1-216ENST00000475298 APLNQ9ULZ1 77 aa8.09□□□□□ -1.11
CCNL1-216ENST00000475298 CHTF8P0CG12 524 aa8.08□□□□□ -1.12
CCNL1-216ENST00000475298 PLECQ15149 4684 aaKnown RBP8.07□□□□□ -1.12
CCNL1-216ENST00000475298 IGLV7-46A0A075B6I9 117 aa8.07□□□□□ -1.12
CCNL1-216ENST00000475298 IGFL1Q6UW32 110 aa8.07□□□□□ -1.12
CCNL1-216ENST00000475298 LINC01558Q9Y6Z2 57 aa8.07□□□□□ -1.12
CCNL1-216ENST00000475298 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
CCNL1-216ENST00000475298 SPINK7P58062 85 aa8.05□□□□□ -1.12
CCNL1-216ENST00000475298 CASC2Q6XLA1 102 aa8.05□□□□□ -1.12
CCNL1-216ENST00000475298 KRTAP11-1Q8IUC1 163 aa8.05□□□□□ -1.12
CCNL1-216ENST00000475298 DYNC2H1Q8NCM8 4307 aaKnown RBP8.05□□□□□ -1.12
CCNL1-216ENST00000475298 DNHD1Q96M86 4753 aa8.05□□□□□ -1.12
CCNL1-216ENST00000475298 A0A087WSZ3 146 aa8.04□□□□□ -1.12
CCNL1-216ENST00000475298 SPAG11AQ6PDA7 123 aa8.04□□□□□ -1.12
CCNL1-216ENST00000475298 LINC00313P59037 77 aa7.99□□□□□ -1.13
CCNL1-216ENST00000475298 PANO1I0J062 215 aa7.98□□□□□ -1.13
CCNL1-216ENST00000475298 PRAC1Q96KF2 57 aa7.98□□□□□ -1.13
CCNL1-216ENST00000475298 STARD9Q9P2P6 4700 aa7.97□□□□□ -1.13
CCNL1-216ENST00000475298 IGLV8-61A0A075B6I0 122 aa7.97□□□□□ -1.13
CCNL1-216ENST00000475298 NBDYA0A0U1RRE5 68 aa7.97□□□□□ -1.13
CCNL1-216ENST00000475298 C14orf177Q52M58 125 aa7.97□□□□□ -1.13
CCNL1-216ENST00000475298 PCOTHQ58A44 107 aa7.97□□□□□ -1.13
CCNL1-216ENST00000475298 A8MWP4 228 aa7.96□□□□□ -1.14
CCNL1-216ENST00000475298 PRKDCP78527 4128 aaKnown RBP7.95□□□□□ -1.14
CCNL1-216ENST00000475298 Q6ZRN7 208 aaPredicted RBP7.94□□□□□ -1.14
CCNL1-216ENST00000475298 LINC00472Q9H8W2 130 aa7.93□□□□□ -1.14
CCNL1-216ENST00000475298 ADM2Q7Z4H4 148 aa7.93□□□□□ -1.14
CCNL1-216ENST00000475298 MMP24-AS1A0A0U1RRL7 71 aa7.92□□□□□ -1.14
CCNL1-216ENST00000475298 HRES1P13985 223 aa7.92□□□□□ -1.14
CCNL1-216ENST00000475298 NUPR2A6NF83 97 aa7.91□□□□□ -1.14
CCNL1-216ENST00000475298 H3BS24 57 aa7.91□□□□□ -1.14
CCNL1-216ENST00000475298 VPS13DQ5THJ4 4388 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms