RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 ACYP1P07311 99 aa6.24□□□□□ -1.41
COL12A1-206ENST00000474564 LINC00483Q53H64 154 aa6.24□□□□□ -1.41
COL12A1-206ENST00000474564 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
COL12A1-206ENST00000474564 C3orf22Q8N5N4 141 aa6.23□□□□□ -1.41
COL12A1-206ENST00000474564 IGLV9-49A0A0B4J1Y8 123 aa6.22□□□□□ -1.41
COL12A1-206ENST00000474564 Q6JHZ5 121 aa6.22□□□□□ -1.41
COL12A1-206ENST00000474564 OBSCN-AS1Q96MR7 158 aa6.22□□□□□ -1.41
COL12A1-206ENST00000474564 CCKP06307 115 aa6.21□□□□□ -1.42
COL12A1-206ENST00000474564 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
COL12A1-206ENST00000474564 LOC110117498A0A087WWA1 95 aa6.2□□□□□ -1.42
COL12A1-206ENST00000474564 FAM240AA0A1B0GVK7 77 aa6.2□□□□□ -1.42
COL12A1-206ENST00000474564 KRTAP10-4P60372 401 aaPredicted RBP6.2□□□□□ -1.42
COL12A1-206ENST00000474564 C4orf48Q5BLP8 95 aa6.2□□□□□ -1.42
COL12A1-206ENST00000474564 SSBP3-AS1Q7Z2R9 100 aa6.2□□□□□ -1.42
COL12A1-206ENST00000474564 Q8NBF4 154 aa6.2□□□□□ -1.42
COL12A1-206ENST00000474564 HECTD4Q9Y4D8 3996 aa6.19□□□□□ -1.42
COL12A1-206ENST00000474564 Q6ZQT0 140 aa6.19□□□□□ -1.42
COL12A1-206ENST00000474564 TYMSOSQ8TAI1 123 aa6.19□□□□□ -1.42
COL12A1-206ENST00000474564 MOBPQ13875 183 aa6.18□□□□□ -1.42
COL12A1-206ENST00000474564 UBL5Q9BZL1 73 aa6.18□□□□□ -1.42
COL12A1-206ENST00000474564 ANAPC11Q9NYG5 84 aa6.18□□□□□ -1.42
COL12A1-206ENST00000474564 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
COL12A1-206ENST00000474564 TRBV7-4A0A0J9YYF1 115 aa6.17□□□□□ -1.42
COL12A1-206ENST00000474564 SMIM29Q86T20 159 aa6.17□□□□□ -1.42
COL12A1-206ENST00000474564 RYR3Q15413 4870 aa6.17□□□□□ -1.42
COL12A1-206ENST00000474564 IGLV8-61A0A075B6I0 122 aa6.16□□□□□ -1.42
COL12A1-206ENST00000474564 OXTP01178 125 aa6.15□□□□□ -1.42
COL12A1-206ENST00000474564 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.42
COL12A1-206ENST00000474564 SPAG11AQ6PDA7 123 aa6.14□□□□□ -1.43
COL12A1-206ENST00000474564 PRR26Q8N8Z3 221 aa6.14□□□□□ -1.43
COL12A1-206ENST00000474564 SIGMAR1Q99720 223 aa6.13□□□□□ -1.43
COL12A1-206ENST00000474564 A0A087X002 238 aa6.12□□□□□ -1.43
COL12A1-206ENST00000474564 A0A1B0GW54 56 aa6.12□□□□□ -1.43
COL12A1-206ENST00000474564 CD164Q04900 197 aa6.12□□□□□ -1.43
COL12A1-206ENST00000474564 IGFL1Q6UW32 110 aa6.12□□□□□ -1.43
COL12A1-206ENST00000474564 DNAH5Q8TE73 4624 aa6.12□□□□□ -1.43
COL12A1-206ENST00000474564 LINC00846Q9NV44 126 aa6.12□□□□□ -1.43
COL12A1-206ENST00000474564 PKHD1P08F94 4074 aa6.11□□□□□ -1.43
COL12A1-206ENST00000474564 NREPQ16612 68 aa6.11□□□□□ -1.43
COL12A1-206ENST00000474564 LINC00643Q86TS7 51 aa6.11□□□□□ -1.43
COL12A1-206ENST00000474564 CDIP1Q9H305 208 aa6.11□□□□□ -1.43
COL12A1-206ENST00000474564 LINC00304Q8N9R0 145 aa6.1□□□□□ -1.43
COL12A1-206ENST00000474564 SS18L2Q9UHA2 77 aa6.1□□□□□ -1.43
COL12A1-206ENST00000474564 LRP1BQ9NZR2 4599 aa6.09□□□□□ -1.43
COL12A1-206ENST00000474564 SPINK1P00995 79 aa6.09□□□□□ -1.43
COL12A1-206ENST00000474564 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.43
COL12A1-206ENST00000474564 LIMD2Q9BT23 127 aa6.09□□□□□ -1.43
COL12A1-206ENST00000474564 DNAH8Q96JB1 4490 aa6.08□□□□□ -1.44
COL12A1-206ENST00000474564 A0A1W2PNM2 257 aa6.08□□□□□ -1.44
COL12A1-206ENST00000474564 J3QL48 77 aa6.08□□□□□ -1.44
COL12A1-206ENST00000474564 ATP5EP2Q5VTU8 51 aa6.08□□□□□ -1.44
COL12A1-206ENST00000474564 Q6Q795 121 aa6.08□□□□□ -1.44
COL12A1-206ENST00000474564 HRCT1Q6UXD1 115 aa6.08□□□□□ -1.44
COL12A1-206ENST00000474564 Q6ZVQ6 151 aa6.08□□□□□ -1.44
COL12A1-206ENST00000474564 DYNC1H1Q14204 4646 aaKnown RBP6.08□□□□□ -1.44
COL12A1-206ENST00000474564 IGKV3D-7A0A0C4DH55 119 aa6.07□□□□□ -1.44
COL12A1-206ENST00000474564 A0A0G2JQZ4 141 aa6.07□□□□□ -1.44
COL12A1-206ENST00000474564 MT-ATP8P03928 68 aa6.07□□□□□ -1.44
COL12A1-206ENST00000474564 A0A087WSZ3 146 aa6.06□□□□□ -1.44
COL12A1-206ENST00000474564 TRBV7-7A0A0K0K1E9 115 aa6.06□□□□□ -1.44
COL12A1-206ENST00000474564 KRTAP29-1A8MX34 341 aaPredicted RBP6.06□□□□□ -1.44
COL12A1-206ENST00000474564 KRTAP10-8P60410 259 aa6.05□□□□□ -1.44
COL12A1-206ENST00000474564 RPS29P62273 56 aaKnown RBP6.05□□□□□ -1.44
COL12A1-206ENST00000474564 HIST1H4AP62805 103 aaKnown RBP6.05□□□□□ -1.44
COL12A1-206ENST00000474564 KRTAP17-1Q9BYP8 105 aa6.05□□□□□ -1.44
COL12A1-206ENST00000474564 BPY2O14599 106 aa6.04□□□□□ -1.44
COL12A1-206ENST00000474564 KRTAP4-5Q9BYR2 181 aa6.04□□□□□ -1.44
COL12A1-206ENST00000474564 APOBP04114 4563 aaKnown RBP6.01□□□□□ -1.45
COL12A1-206ENST00000474564 CXCL6P80162 114 aa6□□□□□ -1.45
COL12A1-206ENST00000474564 Q5XG85 94 aa6□□□□□ -1.45
COL12A1-206ENST00000474564 IMUPQ9GZP8 106 aa6□□□□□ -1.45
COL12A1-206ENST00000474564 J3KT08 172 aa5.98□□□□□ -1.45
COL12A1-206ENST00000474564 SRRM2Q9UQ35 2752 aaKnown RBP5.97□□□□□ -1.45
COL12A1-206ENST00000474564 SCGB1A1P11684 91 aa5.97□□□□□ -1.45
COL12A1-206ENST00000474564 ASB16-AS1Q495Z4 193 aa5.97□□□□□ -1.45
COL12A1-206ENST00000474564 DEFB116Q30KQ4 102 aa5.96□□□□□ -1.46
COL12A1-206ENST00000474564 EPPK1P58107 5090 aaKnown RBP5.96□□□□□ -1.46
COL12A1-206ENST00000474564 FAM236AA0A1B0GUQ0 79 aa5.95□□□□□ -1.46
COL12A1-206ENST00000474564 FAM236BA0A1B0GV22 79 aa5.95□□□□□ -1.46
COL12A1-206ENST00000474564 NDUFB1O75438 58 aa5.95□□□□□ -1.46
COL12A1-206ENST00000474564 IGKV4-1P06312 121 aa5.95□□□□□ -1.46
COL12A1-206ENST00000474564 MT1HL1P0DM35 61 aa5.95□□□□□ -1.46
COL12A1-206ENST00000474564 HSPG2P98160 4391 aa5.95□□□□□ -1.46
COL12A1-206ENST00000474564 VPS13BQ7Z7G8 4022 aa5.94□□□□□ -1.46
COL12A1-206ENST00000474564 A0A087WVE0 104 aa5.93□□□□□ -1.46
COL12A1-206ENST00000474564 FP248Q71RG6 208 aaPredicted RBP5.91□□□□□ -1.46
COL12A1-206ENST00000474564 Q8N9L7 120 aa5.91□□□□□ -1.46
COL12A1-206ENST00000474564 KIAA1109Q2LD37 5005 aa5.91□□□□□ -1.46
COL12A1-206ENST00000474564 RYR1P21817 5038 aa5.9□□□□□ -1.46
COL12A1-206ENST00000474564 C1orf195Q5TG92 126 aa5.9□□□□□ -1.46
COL12A1-206ENST00000474564 ANAPC13Q9BS18 74 aa5.9□□□□□ -1.46
COL12A1-206ENST00000474564 LINC00472Q9H8W2 130 aa5.9□□□□□ -1.46
COL12A1-206ENST00000474564 A8MWP4 228 aa5.89□□□□□ -1.47
COL12A1-206ENST00000474564 K7EQZ3 153 aa5.89□□□□□ -1.47
COL12A1-206ENST00000474564 ATOX1O00244 68 aa5.89□□□□□ -1.47
COL12A1-206ENST00000474564 FAT1Q14517 4588 aa5.88□□□□□ -1.47
COL12A1-206ENST00000474564 PRR4Q16378 134 aa5.88□□□□□ -1.47
COL12A1-206ENST00000474564 BIRC6Q9NR09 4857 aa5.88□□□□□ -1.47
COL12A1-206ENST00000474564 FLG2Q5D862 2391 aaPredicted RBP5.88□□□□□ -1.47
COL12A1-206ENST00000474564 DSCR10P59022 87 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 143.3 ms