RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 HIST1H2BDP58876 126 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 HIST1H2BCP62807 126 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 HIST2H2BEQ16778 126 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.89□□□□□ -0.83
CCDC78-208ENST00000471861 CLEC2BQ92478 149 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 HIST1H2BHQ93079 126 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 HIST1H2BNQ99877 126 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 HIST1H2BMQ99879 126 aa9.89□□□□□ -0.83
CCDC78-208ENST00000471861 A4D1N5 150 aa9.88□□□□□ -0.83
CCDC78-208ENST00000471861 A8MUU9 505 aa9.88□□□□□ -0.83
CCDC78-208ENST00000471861 A6NDN8 102 aa9.87□□□□□ -0.83
CCDC78-208ENST00000471861 NHP2Q9NX24 153 aaKnown RBP9.86□□□□□ -0.83
CCDC78-208ENST00000471861 KRTAP19-6Q3LI70 58 aa9.85□□□□□ -0.83
CCDC78-208ENST00000471861 Q6JHZ5 121 aa9.85□□□□□ -0.83
CCDC78-208ENST00000471861 SYS1-DBNDD2H3BUS1 97 aa9.84□□□□□ -0.83
CCDC78-208ENST00000471861 SMIM11BQ8TCY0 68 aa9.84□□□□□ -0.83
CCDC78-208ENST00000471861 LINC01545Q5VT33 79 aa9.82□□□□□ -0.84
CCDC78-208ENST00000471861 KRTAP16-1A8MUX0 517 aa9.81□□□□□ -0.84
CCDC78-208ENST00000471861 LST1O00453 97 aa9.79□□□□□ -0.84
CCDC78-208ENST00000471861 COA6Q5JTJ3 125 aaKnown RBP9.79□□□□□ -0.84
CCDC78-208ENST00000471861 Q6ZQY7 126 aa9.79□□□□□ -0.84
CCDC78-208ENST00000471861 TRAV13-2A0A0B4J235 113 aa9.78□□□□□ -0.84
CCDC78-208ENST00000471861 FAM236DA0A1B0GTK5 79 aa9.78□□□□□ -0.84
CCDC78-208ENST00000471861 FAM236CP0DP71 79 aa9.78□□□□□ -0.84
CCDC78-208ENST00000471861 IFITM1P13164 125 aa9.78□□□□□ -0.84
CCDC78-208ENST00000471861 S100A1P23297 94 aa9.78□□□□□ -0.84
CCDC78-208ENST00000471861 LINC00575Q6W349 94 aa9.78□□□□□ -0.84
CCDC78-208ENST00000471861 MPLKIPQ8TAP9 179 aa9.78□□□□□ -0.84
CCDC78-208ENST00000471861 OCIAD2Q56VL3 154 aa9.77□□□□□ -0.85
CCDC78-208ENST00000471861 SCGB1D4Q6XE38 83 aa9.77□□□□□ -0.85
CCDC78-208ENST00000471861 MUSTN1Q8IVN3 82 aa9.77□□□□□ -0.85
CCDC78-208ENST00000471861 KRTAP6-3Q3LI67 103 aa9.76□□□□□ -0.85
CCDC78-208ENST00000471861 HRES1P13985 223 aa9.74□□□□□ -0.85
CCDC78-208ENST00000471861 COPS9Q8WXC6 57 aa9.74□□□□□ -0.85
CCDC78-208ENST00000471861 LINC00846Q9NV44 126 aa9.74□□□□□ -0.85
CCDC78-208ENST00000471861 PET117Q6UWS5 81 aa9.72□□□□□ -0.85
CCDC78-208ENST00000471861 H3BUT2 72 aa9.71□□□□□ -0.86
CCDC78-208ENST00000471861 C3orf79P0CE67 100 aa9.71□□□□□ -0.86
CCDC78-208ENST00000471861 hADV29S1A0JD25 119 aa9.7□□□□□ -0.86
CCDC78-208ENST00000471861 DSCR10P59022 87 aa9.7□□□□□ -0.86
CCDC78-208ENST00000471861 Q6ZVH6 145 aa9.7□□□□□ -0.86
CCDC78-208ENST00000471861 ANKRD39Q53RE8 183 aa9.69□□□□□ -0.86
CCDC78-208ENST00000471861 KRTDAPP60985 99 aa9.67□□□□□ -0.86
CCDC78-208ENST00000471861 VAMP3Q15836 100 aa9.66□□□□□ -0.86
CCDC78-208ENST00000471861 RBM12B-AS1Q9P1G2 102 aa9.66□□□□□ -0.86
CCDC78-208ENST00000471861 SS18L2Q9UHA2 77 aa9.65□□□□□ -0.86
CCDC78-208ENST00000471861 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.63□□□□□ -0.87
CCDC78-208ENST00000471861 NOTCH2NLQ7Z3S9 236 aa9.62□□□□□ -0.87
CCDC78-208ENST00000471861 NEBP20929 6669 aa9.61□□□□□ -0.87
CCDC78-208ENST00000471861 PPDPFLQ8WWR9 84 aa9.61□□□□□ -0.87
CCDC78-208ENST00000471861 HIST3H2BBQ8N257 126 aa9.6□□□□□ -0.87
CCDC78-208ENST00000471861 SNHG12Q9BXW3 62 aa9.59□□□□□ -0.87
CCDC78-208ENST00000471861 A0A087WSZ3 146 aa9.58□□□□□ -0.88
CCDC78-208ENST00000471861 SCGB1D1O95968 90 aa9.57□□□□□ -0.88
CCDC78-208ENST00000471861 ATOH7Q8N100 152 aa9.57□□□□□ -0.88
CCDC78-208ENST00000471861 HIST1H2BLQ99880 126 aa9.57□□□□□ -0.88
CCDC78-208ENST00000471861 S100A2P29034 98 aa9.56□□□□□ -0.88
CCDC78-208ENST00000471861 TEN1Q86WV5 123 aa9.56□□□□□ -0.88
CCDC78-208ENST00000471861 S100A6P06703 90 aa9.55□□□□□ -0.88
CCDC78-208ENST00000471861 SIGMAR1Q99720 223 aa9.53□□□□□ -0.88
CCDC78-208ENST00000471861 LINC00313P59037 77 aa9.51□□□□□ -0.89
CCDC78-208ENST00000471861 SNRPEP62304 92 aaKnown RBP9.5□□□□□ -0.89
CCDC78-208ENST00000471861 MUC12Q9UKN1 5478 aa9.49□□□□□ -0.89
CCDC78-208ENST00000471861 BVES-AS1Q5T3Y7 98 aa9.47□□□□□ -0.89
CCDC78-208ENST00000471861 Q8N9P0 234 aaPredicted RBP9.47□□□□□ -0.89
CCDC78-208ENST00000471861 NDUFV3P56181 108 aaKnown RBP9.45□□□□□ -0.9
CCDC78-208ENST00000471861 C12orf57Q99622 126 aa9.44□□□□□ -0.9
CCDC78-208ENST00000471861 A0A1W2PNM2 257 aa9.43□□□□□ -0.9
CCDC78-208ENST00000471861 A8MWP4 228 aa9.43□□□□□ -0.9
CCDC78-208ENST00000471861 HSBP1L1C9JCN9 74 aa9.43□□□□□ -0.9
CCDC78-208ENST00000471861 IGKV4-1P06312 121 aa9.42□□□□□ -0.9
CCDC78-208ENST00000471861 MTURNQ8N3F0 131 aa9.41□□□□□ -0.9
CCDC78-208ENST00000471861 FAM218AQ96MZ4 157 aa9.39□□□□□ -0.91
CCDC78-208ENST00000471861 H3BMG7 143 aa9.38□□□□□ -0.91
CCDC78-208ENST00000471861 DEFB116Q30KQ4 102 aa9.35□□□□□ -0.91
CCDC78-208ENST00000471861 IGHV6-1A0A0B4J1U7 121 aa9.33□□□□□ -0.92
CCDC78-208ENST00000471861 SPINK7P58062 85 aa9.33□□□□□ -0.92
CCDC78-208ENST00000471861 KRTAP20-1Q3LI63 56 aa9.32□□□□□ -0.92
CCDC78-208ENST00000471861 COX8AP10176 69 aa9.31□□□□□ -0.92
CCDC78-208ENST00000471861 LINC00472Q9H8W2 130 aa9.31□□□□□ -0.92
CCDC78-208ENST00000471861 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
CCDC78-208ENST00000471861 DLEU1O43261 78 aa9.28□□□□□ -0.92
CCDC78-208ENST00000471861 TRBV7-4A0A0J9YYF1 115 aa9.27□□□□□ -0.93
CCDC78-208ENST00000471861 PAM16Q9Y3D7 125 aa9.27□□□□□ -0.93
CCDC78-208ENST00000471861 FABP2P12104 132 aa9.26□□□□□ -0.93
CCDC78-208ENST00000471861 SPATA45Q537H7 98 aa9.26□□□□□ -0.93
CCDC78-208ENST00000471861 H0YGX0 51 aa9.25□□□□□ -0.93
CCDC78-208ENST00000471861 WFDC13Q8IUB5 93 aa9.25□□□□□ -0.93
CCDC78-208ENST00000471861 VAMP8Q9BV40 100 aa9.25□□□□□ -0.93
CCDC78-208ENST00000471861 C14orf144Q96I85 54 aa9.24□□□□□ -0.93
CCDC78-208ENST00000471861 HIST1H4GQ99525 98 aa9.24□□□□□ -0.93
CCDC78-208ENST00000471861 SNCGO76070 127 aa9.23□□□□□ -0.93
CCDC78-208ENST00000471861 A0A1B0GV72 72 aa9.21□□□□□ -0.94
CCDC78-208ENST00000471861 C8orf87E5RJ46 101 aa9.21□□□□□ -0.94
CCDC78-208ENST00000471861 HIGD1BQ9P298 99 aa9.21□□□□□ -0.94
CCDC78-208ENST00000471861 TMA7Q9Y2S6 64 aaKnown RBP9.21□□□□□ -0.94
CCDC78-208ENST00000471861 A0A1B0GVX0 72 aa9.2□□□□□ -0.94
CCDC78-208ENST00000471861 ANKRD29Q8N6D5 301 aa9.2□□□□□ -0.94
CCDC78-208ENST00000471861 RAB37Q96AX2 223 aa9.2□□□□□ -0.94
CCDC78-208ENST00000471861 PYY3Q5JQD4 70 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms