RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 FAM240AA0A1B0GVK7 77 aa3.75□□□□□ -1.81
SMNDC1-204ENST00000471297 PDE6GP18545 87 aa3.75□□□□□ -1.81
SMNDC1-204ENST00000471297 NDUFV3P56181 108 aaKnown RBP3.75□□□□□ -1.81
SMNDC1-204ENST00000471297 KRTAP11-1Q8IUC1 163 aa3.75□□□□□ -1.81
SMNDC1-204ENST00000471297 Q8N377 158 aa3.75□□□□□ -1.81
SMNDC1-204ENST00000471297 ERC2-IT1O76042 136 aa3.74□□□□□ -1.81
SMNDC1-204ENST00000471297 CCKP06307 115 aa3.74□□□□□ -1.81
SMNDC1-204ENST00000471297 LINC01547P58512 204 aaPredicted RBP3.74□□□□□ -1.81
SMNDC1-204ENST00000471297 KRTAP10-1P60331 282 aa3.74□□□□□ -1.81
SMNDC1-204ENST00000471297 PRLHP81277 87 aa3.74□□□□□ -1.81
SMNDC1-204ENST00000471297 DEFB105AQ8NG35 78 aa3.74□□□□□ -1.81
SMNDC1-204ENST00000471297 CIRBP-AS1Q8TBR5 109 aa3.74□□□□□ -1.81
SMNDC1-204ENST00000471297 DSCR8Q96T75 97 aa3.74□□□□□ -1.81
SMNDC1-204ENST00000471297 C14orf132Q9NPU4 83 aa3.74□□□□□ -1.81
SMNDC1-204ENST00000471297 LOC110117498A0A087WWA1 95 aa3.73□□□□□ -1.81
SMNDC1-204ENST00000471297 C1orf137Q5JT78 98 aa3.73□□□□□ -1.81
SMNDC1-204ENST00000471297 KRTAP13-1Q8IUC0 172 aa3.73□□□□□ -1.81
SMNDC1-204ENST00000471297 VPS25Q9BRG1 176 aa3.73□□□□□ -1.81
SMNDC1-204ENST00000471297 HIGD2AQ9BW72 106 aa3.73□□□□□ -1.81
SMNDC1-204ENST00000471297 PSORS1C2Q9UIG4 136 aa3.73□□□□□ -1.81
SMNDC1-204ENST00000471297 A0A1B0GVY2 172 aa3.72□□□□□ -1.81
SMNDC1-204ENST00000471297 ZNF861PO60384 105 aa3.72□□□□□ -1.81
SMNDC1-204ENST00000471297 SPRR1BP22528 89 aa3.72□□□□□ -1.81
SMNDC1-204ENST00000471297 GAGE2AQ6NT46 116 aa3.72□□□□□ -1.81
SMNDC1-204ENST00000471297 Q6ZQT0 140 aa3.72□□□□□ -1.81
SMNDC1-204ENST00000471297 SCXQ7RTU7 201 aa3.72□□□□□ -1.81
SMNDC1-204ENST00000471297 ST20-AS1Q8NBB2 130 aa3.72□□□□□ -1.81
SMNDC1-204ENST00000471297 ZNF706Q9Y5V0 76 aaPredicted RBP3.72□□□□□ -1.81
SMNDC1-204ENST00000471297 PLECQ15149 4684 aaKnown RBP3.71□□□□□ -1.81
SMNDC1-204ENST00000471297 TRBV7-4A0A0J9YYF1 115 aa3.71□□□□□ -1.82
SMNDC1-204ENST00000471297 F8WEM9 126 aa3.71□□□□□ -1.82
SMNDC1-204ENST00000471297 IGLV7-43P04211 117 aa3.71□□□□□ -1.82
SMNDC1-204ENST00000471297 SMIM29Q86T20 159 aa3.71□□□□□ -1.82
SMNDC1-204ENST00000471297 TGP01266 2768 aa3.71□□□□□ -1.82
SMNDC1-204ENST00000471297 A0A1B0GV72 72 aa3.7□□□□□ -1.82
SMNDC1-204ENST00000471297 A0A1B0GW54 56 aa3.7□□□□□ -1.82
SMNDC1-204ENST00000471297 Q75L30 129 aa3.7□□□□□ -1.82
SMNDC1-204ENST00000471297 DNAH1Q9P2D7 4330 aa3.7□□□□□ -1.82
SMNDC1-204ENST00000471297 IGLV8-61A0A075B6I0 122 aa3.69□□□□□ -1.82
SMNDC1-204ENST00000471297 SPRR4Q96PI1 79 aa3.69□□□□□ -1.82
SMNDC1-204ENST00000471297 SIGMAR1Q99720 223 aa3.69□□□□□ -1.82
SMNDC1-204ENST00000471297 VPS13DQ5THJ4 4388 aa3.69□□□□□ -1.82
SMNDC1-204ENST00000471297 ALMS1Q8TCU4 4167 aa3.69□□□□□ -1.82
SMNDC1-204ENST00000471297 LYSTQ99698 3801 aa3.68□□□□□ -1.82
SMNDC1-204ENST00000471297 RPL37AP61513 92 aaKnown RBP3.68□□□□□ -1.82
SMNDC1-204ENST00000471297 LINC00483Q53H64 154 aa3.68□□□□□ -1.82
SMNDC1-204ENST00000471297 Q6JHZ5 121 aa3.68□□□□□ -1.82
SMNDC1-204ENST00000471297 LINC00643Q86TS7 51 aa3.68□□□□□ -1.82
SMNDC1-204ENST00000471297 C3orf22Q8N5N4 141 aa3.67□□□□□ -1.82
SMNDC1-204ENST00000471297 UBL5Q9BZL1 73 aa3.67□□□□□ -1.82
SMNDC1-204ENST00000471297 LINC00846Q9NV44 126 aa3.67□□□□□ -1.82
SMNDC1-204ENST00000471297 DNAH6Q9C0G6 4158 aa3.66□□□□□ -1.82
SMNDC1-204ENST00000471297 KMT2AQ03164 3969 aa3.65□□□□□ -1.82
SMNDC1-204ENST00000471297 A0A1W2PNM2 257 aa3.65□□□□□ -1.83
SMNDC1-204ENST00000471297 XGP55808 180 aa3.65□□□□□ -1.83
SMNDC1-204ENST00000471297 HAMPP81172 84 aa3.65□□□□□ -1.83
SMNDC1-204ENST00000471297 IGFL1Q6UW32 110 aa3.65□□□□□ -1.83
SMNDC1-204ENST00000471297 Q8NBF4 154 aa3.65□□□□□ -1.83
SMNDC1-204ENST00000471297 MT-ATP8P03928 68 aa3.64□□□□□ -1.83
SMNDC1-204ENST00000471297 CRYGAP11844 174 aa3.64□□□□□ -1.83
SMNDC1-204ENST00000471297 ATP5EP2Q5VTU8 51 aa3.64□□□□□ -1.83
SMNDC1-204ENST00000471297 Q6Q795 121 aa3.64□□□□□ -1.83
SMNDC1-204ENST00000471297 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
SMNDC1-204ENST00000471297 IMUPQ9GZP8 106 aa3.64□□□□□ -1.83
SMNDC1-204ENST00000471297 TRBV7-7A0A0K0K1E9 115 aa3.63□□□□□ -1.83
SMNDC1-204ENST00000471297 NREPQ16612 68 aa3.63□□□□□ -1.83
SMNDC1-204ENST00000471297 FAM229BQ4G0N7 80 aa3.63□□□□□ -1.83
SMNDC1-204ENST00000471297 C9orf153Q5TBE3 101 aa3.63□□□□□ -1.83
SMNDC1-204ENST00000471297 SPINK6Q6UWN8 80 aa3.63□□□□□ -1.83
SMNDC1-204ENST00000471297 SSBP3-AS1Q7Z2R9 100 aa3.63□□□□□ -1.83
SMNDC1-204ENST00000471297 IGLV9-49A0A0B4J1Y8 123 aa3.62□□□□□ -1.83
SMNDC1-204ENST00000471297 SCGB1A1P11684 91 aa3.62□□□□□ -1.83
SMNDC1-204ENST00000471297 Q6ZVQ6 151 aa3.62□□□□□ -1.83
SMNDC1-204ENST00000471297 MT3P25713 68 aa3.61□□□□□ -1.83
SMNDC1-204ENST00000471297 CXCL6P80162 114 aa3.61□□□□□ -1.83
SMNDC1-204ENST00000471297 DNAH10Q8IVF4 4471 aa3.6□□□□□ -1.83
SMNDC1-204ENST00000471297 IGKV3D-7A0A0C4DH55 119 aa3.6□□□□□ -1.83
SMNDC1-204ENST00000471297 CDK2AP2O75956 126 aa3.6□□□□□ -1.83
SMNDC1-204ENST00000471297 SMR3BP02814 79 aaPredicted RBP3.6□□□□□ -1.83
SMNDC1-204ENST00000471297 CD164Q04900 197 aa3.6□□□□□ -1.83
SMNDC1-204ENST00000471297 MOBPQ13875 183 aa3.6□□□□□ -1.83
SMNDC1-204ENST00000471297 ANAPC11Q9NYG5 84 aa3.6□□□□□ -1.83
SMNDC1-204ENST00000471297 A0A087WSZ3 146 aa3.59□□□□□ -1.83
SMNDC1-204ENST00000471297 A0A0G2JQZ4 141 aa3.59□□□□□ -1.83
SMNDC1-204ENST00000471297 BPY2O14599 106 aa3.58□□□□□ -1.84
SMNDC1-204ENST00000471297 KRTAP1-4P0C5Y4 121 aa3.58□□□□□ -1.84
SMNDC1-204ENST00000471297 SS18L2Q9UHA2 77 aa3.58□□□□□ -1.84
SMNDC1-204ENST00000471297 KRTAP10-4P60372 401 aaPredicted RBP3.57□□□□□ -1.84
SMNDC1-204ENST00000471297 HECTD4Q9Y4D8 3996 aa3.57□□□□□ -1.84
SMNDC1-204ENST00000471297 DNAH17Q9UFH2 4485 aa3.57□□□□□ -1.84
SMNDC1-204ENST00000471297 J3KT08 172 aa3.56□□□□□ -1.84
SMNDC1-204ENST00000471297 HIST1H4AP62805 103 aaKnown RBP3.56□□□□□ -1.84
SMNDC1-204ENST00000471297 KRTAP13-2Q52LG2 175 aa3.56□□□□□ -1.84
SMNDC1-204ENST00000471297 HRCT1Q6UXD1 115 aa3.56□□□□□ -1.84
SMNDC1-204ENST00000471297 DNAH2Q9P225 4427 aa3.56□□□□□ -1.84
SMNDC1-204ENST00000471297 HYDINQ4G0P3 5121 aa3.56□□□□□ -1.84
SMNDC1-204ENST00000471297 FRAS1Q86XX4 4008 aa3.56□□□□□ -1.84
SMNDC1-204ENST00000471297 A0A087X002 238 aa3.55□□□□□ -1.84
SMNDC1-204ENST00000471297 TYMSOSQ8TAI1 123 aa3.55□□□□□ -1.84
SMNDC1-204ENST00000471297 LINC00472Q9H8W2 130 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms