RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 HRES1P13985 223 aa3.09□□□□□ -1.91
COL3A1-205ENST00000470167 COX17Q14061 63 aa3.09□□□□□ -1.91
COL3A1-205ENST00000470167 ZNRD1Q9P1U0 126 aa3.09□□□□□ -1.91
COL3A1-205ENST00000470167 MALRD1Q5VYJ5 2156 aa3.09□□□□□ -1.91
COL3A1-205ENST00000470167 CADP27708 2225 aa3.08□□□□□ -1.92
COL3A1-205ENST00000470167 SPENQ96T58 3664 aaKnown RBP3.08□□□□□ -1.92
COL3A1-205ENST00000470167 A0A0J9YWU9 116 aa3.08□□□□□ -1.92
COL3A1-205ENST00000470167 A0A1B0GU69 56 aa3.08□□□□□ -1.92
COL3A1-205ENST00000470167 K7EIM0 57 aa3.08□□□□□ -1.92
COL3A1-205ENST00000470167 DSCR10P59022 87 aa3.08□□□□□ -1.92
COL3A1-205ENST00000470167 Q8NBF4 154 aa3.08□□□□□ -1.92
COL3A1-205ENST00000470167 HIVEP1P15822 2718 aa3.07□□□□□ -1.92
COL3A1-205ENST00000470167 ADGRG4Q8IZF6 3080 aa3.07□□□□□ -1.92
COL3A1-205ENST00000470167 DIDO1Q9BTC0 2240 aaKnown RBP3.07□□□□□ -1.92
COL3A1-205ENST00000470167 KRTAP29-1A8MX34 341 aaPredicted RBP3.07□□□□□ -1.92
COL3A1-205ENST00000470167 COX6A2Q02221 97 aa3.07□□□□□ -1.92
COL3A1-205ENST00000470167 C10orf55Q5SWW7 151 aa3.07□□□□□ -1.92
COL3A1-205ENST00000470167 PRR9Q5T870 116 aa3.07□□□□□ -1.92
COL3A1-205ENST00000470167 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.07□□□□□ -1.92
COL3A1-205ENST00000470167 A0A1B0GU33 70 aa3.06□□□□□ -1.92
COL3A1-205ENST00000470167 F5P12259 2224 aa3.06□□□□□ -1.92
COL3A1-205ENST00000470167 SPTBN1Q01082 2364 aaKnown RBP3.05□□□□□ -1.92
COL3A1-205ENST00000470167 RYR1P21817 5038 aa3.05□□□□□ -1.92
COL3A1-205ENST00000470167 PATE1Q8WXA2 126 aa3.05□□□□□ -1.92
COL3A1-205ENST00000470167 COL6A6A6NMZ7 2263 aa3.05□□□□□ -1.92
COL3A1-205ENST00000470167 CACNA1EQ15878 2313 aa3.04□□□□□ -1.92
COL3A1-205ENST00000470167 IGLV5-48A0A075B6I7 105 aa3.04□□□□□ -1.92
COL3A1-205ENST00000470167 NBDYA0A0U1RRE5 68 aa3.04□□□□□ -1.92
COL3A1-205ENST00000470167 SPINT4Q6UDR6 99 aa3.04□□□□□ -1.92
COL3A1-205ENST00000470167 COL27A1Q8IZC6 1860 aaPredicted RBP3.04□□□□□ -1.92
COL3A1-205ENST00000470167 MGAQ8IWI9 3026 aa3.04□□□□□ -1.92
COL3A1-205ENST00000470167 LAMA1P25391 3075 aa3.04□□□□□ -1.92
COL3A1-205ENST00000470167 BIRC6Q9NR09 4857 aa3.03□□□□□ -1.92
COL3A1-205ENST00000470167 K7EQZ3 153 aa3.03□□□□□ -1.92
COL3A1-205ENST00000470167 Q96NJ1 140 aa3.03□□□□□ -1.92
COL3A1-205ENST00000470167 RNF5Q99942 180 aa3.03□□□□□ -1.92
COL3A1-205ENST00000470167 AHCTF1Q8WYP5 2266 aa3.03□□□□□ -1.92
COL3A1-205ENST00000470167 ACACAQ13085 2346 aa3.02□□□□□ -1.93
COL3A1-205ENST00000470167 IGLV6-57P01721 117 aa3.02□□□□□ -1.93
COL3A1-205ENST00000470167 IGLV7-43P04211 117 aa3.02□□□□□ -1.93
COL3A1-205ENST00000470167 LINC00304Q8N9R0 145 aa3.02□□□□□ -1.93
COL3A1-205ENST00000470167 CSMD1Q96PZ7 3565 aa3.01□□□□□ -1.93
COL3A1-205ENST00000470167 KLK9Q2XQG4 91 aa3.01□□□□□ -1.93
COL3A1-205ENST00000470167 SDK1Q7Z5N4 2213 aa3.01□□□□□ -1.93
COL3A1-205ENST00000470167 NBASA2RRP1 2371 aa3.01□□□□□ -1.93
COL3A1-205ENST00000470167 ANGP03950 147 aaKnown RBP3□□□□□ -1.93
COL3A1-205ENST00000470167 CCL19Q99731 98 aa3□□□□□ -1.93
COL3A1-205ENST00000470167 ICE1Q9Y2F5 2266 aa3□□□□□ -1.93
COL3A1-205ENST00000470167 SEC16AO15027 2179 aa3□□□□□ -1.93
COL3A1-205ENST00000470167 FAM168BA1KXE4 195 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 KRTAP10-11P60412 298 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 DEFB104AQ8WTQ1 72 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 C4orf3Q8WVX3 66 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 C16orf74Q96GX8 76 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 TP53AIP1Q9HCN2 124 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 ANAPC11Q9NYG5 84 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 CCL26Q9Y258 94 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 CSPG4Q6UVK1 2322 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 RYR3Q15413 4870 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 DCHS2Q6V1P9 2916 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 ATMQ13315 3056 aa2.99□□□□□ -1.93
COL3A1-205ENST00000470167 LYNX1G3V0Z9 82 aa2.98□□□□□ -1.93
COL3A1-205ENST00000470167 KRTAP11-1Q8IUC1 163 aa2.98□□□□□ -1.93
COL3A1-205ENST00000470167 GIG44P09565 113 aaPredicted RBP2.97□□□□□ -1.93
COL3A1-205ENST00000470167 ACYP2P14621 99 aa2.97□□□□□ -1.93
COL3A1-205ENST00000470167 C5orf56Q8N8D9 126 aa2.97□□□□□ -1.93
COL3A1-205ENST00000470167 APCP25054 2843 aa2.97□□□□□ -1.93
COL3A1-205ENST00000470167 APC2O95996 2303 aa2.97□□□□□ -1.93
COL3A1-205ENST00000470167 A0A1W2PNN7 141 aa2.96□□□□□ -1.94
COL3A1-205ENST00000470167 LY6G6CO95867 125 aa2.96□□□□□ -1.94
COL3A1-205ENST00000470167 ABCA4P78363 2273 aa2.96□□□□□ -1.94
COL3A1-205ENST00000470167 TENM1Q9UKZ4 2725 aa2.95□□□□□ -1.94
COL3A1-205ENST00000470167 HYDINQ4G0P3 5121 aa2.95□□□□□ -1.94
COL3A1-205ENST00000470167 IGKV2-24A0A0C4DH68 120 aa2.95□□□□□ -1.94
COL3A1-205ENST00000470167 A0A0G2JQZ4 141 aa2.95□□□□□ -1.94
COL3A1-205ENST00000470167 RPL37AP61513 92 aaKnown RBP2.95□□□□□ -1.94
COL3A1-205ENST00000470167 LCE1AQ5T7P2 110 aa2.95□□□□□ -1.94
COL3A1-205ENST00000470167 PRO2289Q9P1D8 64 aa2.95□□□□□ -1.94
COL3A1-205ENST00000470167 KAAG1Q9UBP8 84 aa2.95□□□□□ -1.94
COL3A1-205ENST00000470167 URB1O60287 2271 aaKnown RBP2.95□□□□□ -1.94
COL3A1-205ENST00000470167 PRRC2CQ9Y520 2896 aaKnown RBP2.94□□□□□ -1.94
COL3A1-205ENST00000470167 WFDC13Q8IUB5 93 aa2.94□□□□□ -1.94
COL3A1-205ENST00000470167 Q8N377 158 aa2.94□□□□□ -1.94
COL3A1-205ENST00000470167 RP1P56715 2156 aa2.94□□□□□ -1.94
COL3A1-205ENST00000470167 KMT2CQ8NEZ4 4911 aaKnown RBP2.93□□□□□ -1.94
COL3A1-205ENST00000470167 KRTAP24-1Q3LI83 254 aa2.93□□□□□ -1.94
COL3A1-205ENST00000470167 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.93□□□□□ -1.94
COL3A1-205ENST00000470167 AKAP9Q99996 3911 aa2.92□□□□□ -1.94
COL3A1-205ENST00000470167 PCOTHQ58A44 107 aa2.92□□□□□ -1.94
COL3A1-205ENST00000470167 TOMM7Q9P0U1 55 aa2.92□□□□□ -1.94
COL3A1-205ENST00000470167 MGAM2Q2M2H8 2515 aa2.92□□□□□ -1.94
COL3A1-205ENST00000470167 EPPK1P58107 5090 aaKnown RBP2.92□□□□□ -1.94
COL3A1-205ENST00000470167 MEGF8Q7Z7M0 2845 aa2.91□□□□□ -1.94
COL3A1-205ENST00000470167 A0A1W2PPR1 153 aa2.91□□□□□ -1.94
COL3A1-205ENST00000470167 DEFB110Q30KQ9 67 aa2.91□□□□□ -1.94
COL3A1-205ENST00000470167 WFDC10BQ8IUB3 73 aa2.91□□□□□ -1.94
COL3A1-205ENST00000470167 WNK1Q9H4A3 2382 aa2.91□□□□□ -1.94
COL3A1-205ENST00000470167 ACANP16112 2415 aa2.91□□□□□ -1.94
COL3A1-205ENST00000470167 SSBP3-AS1Q7Z2R9 100 aa2.9□□□□□ -1.95
COL3A1-205ENST00000470167 C6orf48Q9UBA6 75 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms