RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 RPL37AP61513 92 aaKnown RBP3.78□□□□□ -1.8
SSBP1-204ENST00000465167 RBM3P98179 157 aaKnown RBP3.78□□□□□ -1.8
SSBP1-204ENST00000465167 CD164L2Q6UWJ8 174 aa3.78□□□□□ -1.8
SSBP1-204ENST00000465167 PKD1P98161 4303 aa3.77□□□□□ -1.81
SSBP1-204ENST00000465167 TRAV23DV6A0A075B6W5 121 aa3.77□□□□□ -1.81
SSBP1-204ENST00000465167 LOC110117498A0A087WWA1 95 aa3.77□□□□□ -1.81
SSBP1-204ENST00000465167 TRBV7-6A0A0J9YX20 115 aa3.77□□□□□ -1.81
SSBP1-204ENST00000465167 C6orf226Q5I0X4 101 aa3.77□□□□□ -1.81
SSBP1-204ENST00000465167 SOSTDC1Q6X4U4 206 aa3.77□□□□□ -1.81
SSBP1-204ENST00000465167 SMIM11BQ8TCY0 68 aa3.77□□□□□ -1.81
SSBP1-204ENST00000465167 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
SSBP1-204ENST00000465167 PKIGQ9Y2B9 76 aa3.77□□□□□ -1.81
SSBP1-204ENST00000465167 DNAH2Q9P225 4427 aa3.77□□□□□ -1.81
SSBP1-204ENST00000465167 F8WEM9 126 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 UBE2L6O14933 153 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 LINC00242Q5T6M2 205 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 CLPSL2Q6UWE3 100 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 ENHOQ6UWT2 76 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 Q6ZVQ6 151 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 PRR15Q8IV56 129 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 MIR7-3HGQ8N6C7 128 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 CIRBP-AS1Q8TBR5 109 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 COX7B2Q8TF08 81 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 FAM104AQ969W3 186 aa3.76□□□□□ -1.81
SSBP1-204ENST00000465167 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.75□□□□□ -1.81
SSBP1-204ENST00000465167 IGKV2-29A2NJV5 120 aaPredicted RBP3.75□□□□□ -1.81
SSBP1-204ENST00000465167 NCR3O14931 201 aa3.75□□□□□ -1.81
SSBP1-204ENST00000465167 Q9UF83 564 aa3.75□□□□□ -1.81
SSBP1-204ENST00000465167 DMBT1Q9UGM3 2413 aaPredicted RBP3.74□□□□□ -1.81
SSBP1-204ENST00000465167 DNAH17Q9UFH2 4485 aa3.74□□□□□ -1.81
SSBP1-204ENST00000465167 IGKV2-28A0A075B6P5 120 aa3.74□□□□□ -1.81
SSBP1-204ENST00000465167 IGKV2D-28P01615 120 aa3.74□□□□□ -1.81
SSBP1-204ENST00000465167 REG3AQ06141 175 aa3.74□□□□□ -1.81
SSBP1-204ENST00000465167 FP248Q71RG6 208 aaPredicted RBP3.74□□□□□ -1.81
SSBP1-204ENST00000465167 LINC00269Q8N2A0 174 aa3.74□□□□□ -1.81
SSBP1-204ENST00000465167 LINC00337Q8N6G1 96 aa3.74□□□□□ -1.81
SSBP1-204ENST00000465167 FLG2Q5D862 2391 aaPredicted RBP3.73□□□□□ -1.81
SSBP1-204ENST00000465167 HSPG2P98160 4391 aa3.73□□□□□ -1.81
SSBP1-204ENST00000465167 IGLV10-54A0A075B6I4 117 aa3.73□□□□□ -1.81
SSBP1-204ENST00000465167 LINC00158P58513 81 aa3.73□□□□□ -1.81
SSBP1-204ENST00000465167 RNASE13Q5GAN3 156 aaKnown RBP3.73□□□□□ -1.81
SSBP1-204ENST00000465167 C7orf33Q8WU49 177 aa3.73□□□□□ -1.81
SSBP1-204ENST00000465167 TRBV7-4A0A0J9YYF1 115 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 A0A0U1RRA0 63 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 CD164Q04900 197 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 PMAIP1Q13794 54 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 NREPQ16612 68 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 Q6ZQT0 140 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 Q6ZRU5 148 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 FAM19A1Q7Z5A9 133 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 C9orf163Q8N9P6 203 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 CDC42SE2Q9NRR3 84 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 PRR34Q9NV39 138 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 RYR1P21817 5038 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 DNAH11Q96DT5 4516 aa3.72□□□□□ -1.81
SSBP1-204ENST00000465167 IGLV7-46A0A075B6I9 117 aa3.71□□□□□ -1.82
SSBP1-204ENST00000465167 IGKV3OR2-268A0A0C4DH90 116 aa3.71□□□□□ -1.82
SSBP1-204ENST00000465167 COX6A2Q02221 97 aa3.71□□□□□ -1.82
SSBP1-204ENST00000465167 COX17Q14061 63 aa3.71□□□□□ -1.82
SSBP1-204ENST00000465167 SS18Q15532 418 aa3.71□□□□□ -1.82
SSBP1-204ENST00000465167 NTM-AS1Q6ZSK4 140 aa3.71□□□□□ -1.82
SSBP1-204ENST00000465167 TMEM254Q8TBM7 123 aa3.71□□□□□ -1.82
SSBP1-204ENST00000465167 CNBPP62633 177 aaKnown RBP3.7□□□□□ -1.82
SSBP1-204ENST00000465167 IGLV4-60A0A075B6I1 120 aa3.69□□□□□ -1.82
SSBP1-204ENST00000465167 A0A0U1RQV1 116 aa3.69□□□□□ -1.82
SSBP1-204ENST00000465167 MT3P25713 68 aa3.69□□□□□ -1.82
SSBP1-204ENST00000465167 C9orf129Q5T035 196 aaKnown RBP3.69□□□□□ -1.82
SSBP1-204ENST00000465167 Q8IZM0 81 aa3.69□□□□□ -1.82
SSBP1-204ENST00000465167 LINC00474Q9P2X8 69 aa3.69□□□□□ -1.82
SSBP1-204ENST00000465167 ABCA13Q86UQ4 5058 aa3.69□□□□□ -1.82
SSBP1-204ENST00000465167 DYNC1H1Q14204 4646 aaKnown RBP3.69□□□□□ -1.82
SSBP1-204ENST00000465167 IGKV2-24A0A0C4DH68 120 aa3.68□□□□□ -1.82
SSBP1-204ENST00000465167 A0A1B0GW54 56 aa3.68□□□□□ -1.82
SSBP1-204ENST00000465167 KRTAP10-4P60372 401 aaPredicted RBP3.68□□□□□ -1.82
SSBP1-204ENST00000465167 Q1T7F1 81 aa3.68□□□□□ -1.82
SSBP1-204ENST00000465167 HIGD2BQ4VC39 106 aa3.68□□□□□ -1.82
SSBP1-204ENST00000465167 SPACA4Q8TDM5 124 aa3.68□□□□□ -1.82
SSBP1-204ENST00000465167 TOMM7Q9P0U1 55 aa3.68□□□□□ -1.82
SSBP1-204ENST00000465167 SNURFQ9Y675 71 aa3.68□□□□□ -1.82
SSBP1-204ENST00000465167 BPY2O14599 106 aa3.67□□□□□ -1.82
SSBP1-204ENST00000465167 CHTF8P0CG12 524 aa3.67□□□□□ -1.82
SSBP1-204ENST00000465167 UBE2BP63146 152 aa3.67□□□□□ -1.82
SSBP1-204ENST00000465167 KRTAP26-1Q6PEX3 210 aa3.67□□□□□ -1.82
SSBP1-204ENST00000465167 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
SSBP1-204ENST00000465167 LINC00575Q6W349 94 aa3.67□□□□□ -1.82
SSBP1-204ENST00000465167 CHCHD10Q8WYQ3 142 aaPredicted RBP3.67□□□□□ -1.82
SSBP1-204ENST00000465167 LRP1BQ9NZR2 4599 aa3.66□□□□□ -1.82
SSBP1-204ENST00000465167 NDUFB1O75438 58 aa3.66□□□□□ -1.82
SSBP1-204ENST00000465167 REG3GQ6UW15 175 aa3.66□□□□□ -1.82
SSBP1-204ENST00000465167 MRPL55Q7Z7F7 128 aaKnown RBP3.66□□□□□ -1.82
SSBP1-204ENST00000465167 Q8NBF4 154 aa3.66□□□□□ -1.82
SSBP1-204ENST00000465167 PLAC8Q9NZF1 115 aa3.66□□□□□ -1.82
SSBP1-204ENST00000465167 GVQW2A0A096LPI5 108 aaPredicted RBP3.65□□□□□ -1.83
SSBP1-204ENST00000465167 IGHV3OR16-9A0A0B4J2B5 98 aa3.65□□□□□ -1.83
SSBP1-204ENST00000465167 PANO1I0J062 215 aa3.65□□□□□ -1.83
SSBP1-204ENST00000465167 COX7BP24311 80 aa3.65□□□□□ -1.83
SSBP1-204ENST00000465167 C15orf56Q8N910 161 aa3.65□□□□□ -1.83
SSBP1-204ENST00000465167 hDV103S1A0JD37 113 aa3.64□□□□□ -1.83
SSBP1-204ENST00000465167 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
SSBP1-204ENST00000465167 CYP4F30PQ9H0H9 118 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms