RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 TNP2Q05952 138 aa13.58□□□□□ -0.24
PDLIM2-216ENST00000464275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-216ENST00000464275 H0Y9J4 135 aa13.56□□□□□ -0.24
PDLIM2-216ENST00000464275 SCXQ7RTU7 201 aa13.56□□□□□ -0.24
PDLIM2-216ENST00000464275 KMT2AQ03164 3969 aa13.56□□□□□ -0.24
PDLIM2-216ENST00000464275 BPY2O14599 106 aa13.55□□□□□ -0.24
PDLIM2-216ENST00000464275 TGP01266 2768 aa13.55□□□□□ -0.24
PDLIM2-216ENST00000464275 NDUFC1O43677 76 aa13.54□□□□□ -0.24
PDLIM2-216ENST00000464275 DNAH17Q9UFH2 4485 aa13.53□□□□□ -0.24
PDLIM2-216ENST00000464275 IGKV4-1P06312 121 aa13.53□□□□□ -0.24
PDLIM2-216ENST00000464275 C3orf84H3BNL1 204 aa13.52□□□□□ -0.24
PDLIM2-216ENST00000464275 HIGD2AQ9BW72 106 aa13.52□□□□□ -0.24
PDLIM2-216ENST00000464275 C1orf137Q5JT78 98 aa13.52□□□□□ -0.25
PDLIM2-216ENST00000464275 IGLV5-52A0A0A0MRZ9 124 aa13.51□□□□□ -0.25
PDLIM2-216ENST00000464275 Q8NBF4 154 aa13.51□□□□□ -0.25
PDLIM2-216ENST00000464275 DNAH2Q9P225 4427 aa13.5□□□□□ -0.25
PDLIM2-216ENST00000464275 FAM236DA0A1B0GTK5 79 aa13.5□□□□□ -0.25
PDLIM2-216ENST00000464275 H7BZZ5 65 aa13.5□□□□□ -0.25
PDLIM2-216ENST00000464275 FAM236CP0DP71 79 aa13.5□□□□□ -0.25
PDLIM2-216ENST00000464275 SPRR4Q96PI1 79 aa13.5□□□□□ -0.25
PDLIM2-216ENST00000464275 SMIM29Q86T20 159 aa13.49□□□□□ -0.25
PDLIM2-216ENST00000464275 ALMS1Q8TCU4 4167 aa13.49□□□□□ -0.25
PDLIM2-216ENST00000464275 UBE2AP49459 152 aa13.49□□□□□ -0.25
PDLIM2-216ENST00000464275 A0A1W2PNM2 257 aa13.48□□□□□ -0.25
PDLIM2-216ENST00000464275 HECTD4Q9Y4D8 3996 aa13.47□□□□□ -0.25
PDLIM2-216ENST00000464275 F8WEM9 126 aa13.45□□□□□ -0.26
PDLIM2-216ENST00000464275 PLAC8Q9NZF1 115 aa13.44□□□□□ -0.26
PDLIM2-216ENST00000464275 ATP5EP56381 51 aaPredicted RBP13.43□□□□□ -0.26
PDLIM2-216ENST00000464275 KRTAP13-1Q8IUC0 172 aa13.42□□□□□ -0.26
PDLIM2-216ENST00000464275 SPRR1BP22528 89 aa13.41□□□□□ -0.26
PDLIM2-216ENST00000464275 Q8N9L7 120 aa13.4□□□□□ -0.26
PDLIM2-216ENST00000464275 OCR1Q9BZK8 76 aa13.4□□□□□ -0.26
PDLIM2-216ENST00000464275 SERP1Q9Y6X1 66 aa13.4□□□□□ -0.26
PDLIM2-216ENST00000464275 TMEM254Q8TBM7 123 aa13.39□□□□□ -0.27
PDLIM2-216ENST00000464275 IGLV8-61A0A075B6I0 122 aa13.38□□□□□ -0.27
PDLIM2-216ENST00000464275 SNURFQ9Y675 71 aa13.38□□□□□ -0.27
PDLIM2-216ENST00000464275 OXTP01178 125 aa13.34□□□□□ -0.27
PDLIM2-216ENST00000464275 IGFL1Q6UW32 110 aa13.33□□□□□ -0.28
PDLIM2-216ENST00000464275 PSORS1C2Q9UIG4 136 aa13.32□□□□□ -0.28
PDLIM2-216ENST00000464275 FRAS1Q86XX4 4008 aa13.31□□□□□ -0.28
PDLIM2-216ENST00000464275 A0A0U1RQV1 116 aa13.31□□□□□ -0.28
PDLIM2-216ENST00000464275 KRTAP10-2P60368 255 aa13.31□□□□□ -0.28
PDLIM2-216ENST00000464275 DSCR10P59022 87 aa13.28□□□□□ -0.28
PDLIM2-216ENST00000464275 LCE6AA0A183 80 aa13.26□□□□□ -0.29
PDLIM2-216ENST00000464275 A0A0G2JQZ4 141 aa13.24□□□□□ -0.29
PDLIM2-216ENST00000464275 ZNF706Q9Y5V0 76 aaPredicted RBP13.24□□□□□ -0.29
PDLIM2-216ENST00000464275 DNAH8Q96JB1 4490 aa13.23□□□□□ -0.29
PDLIM2-216ENST00000464275 ZNF861PO60384 105 aa13.23□□□□□ -0.29
PDLIM2-216ENST00000464275 DNAH11Q96DT5 4516 aa13.22□□□□□ -0.29
PDLIM2-216ENST00000464275 C5orf47Q569G3 176 aa13.21□□□□□ -0.29
PDLIM2-216ENST00000464275 DNAH5Q8TE73 4624 aa13.21□□□□□ -0.29
PDLIM2-216ENST00000464275 LINC00483Q53H64 154 aa13.21□□□□□ -0.29
PDLIM2-216ENST00000464275 FAM30AQ9NZY2 134 aa13.21□□□□□ -0.29
PDLIM2-216ENST00000464275 HYDINQ4G0P3 5121 aa13.2□□□□□ -0.3
PDLIM2-216ENST00000464275 K7EQZ3 153 aa13.2□□□□□ -0.3
PDLIM2-216ENST00000464275 Q5XG85 94 aa13.2□□□□□ -0.3
PDLIM2-216ENST00000464275 CIRBP-AS1Q8TBR5 109 aa13.19□□□□□ -0.3
PDLIM2-216ENST00000464275 HCG22E2RYF7 251 aa13.18□□□□□ -0.3
PDLIM2-216ENST00000464275 SMIM26A0A096LP01 95 aa13.17□□□□□ -0.3
PDLIM2-216ENST00000464275 Q6ZSA8 131 aa13.17□□□□□ -0.3
PDLIM2-216ENST00000464275 IGLV7-43P04211 117 aa13.16□□□□□ -0.3
PDLIM2-216ENST00000464275 KRTAP10-1P60331 282 aa13.16□□□□□ -0.3
PDLIM2-216ENST00000464275 A0A087WSZ3 146 aa13.14□□□□□ -0.31
PDLIM2-216ENST00000464275 SRRM2Q9UQ35 2752 aaKnown RBP13.13□□□□□ -0.31
PDLIM2-216ENST00000464275 PKD1P98161 4303 aa13.12□□□□□ -0.31
PDLIM2-216ENST00000464275 RPL37AP61513 92 aaKnown RBP13.12□□□□□ -0.31
PDLIM2-216ENST00000464275 IGLV9-49A0A0B4J1Y8 123 aa13.11□□□□□ -0.31
PDLIM2-216ENST00000464275 FAT2Q9NYQ8 4349 aa13.1□□□□□ -0.31
PDLIM2-216ENST00000464275 ZCCHC13Q8WW36 166 aaKnown RBP13.08□□□□□ -0.32
PDLIM2-216ENST00000464275 C4orf26Q17RF5 130 aa13.07□□□□□ -0.32
PDLIM2-216ENST00000464275 LINC00336Q6ZUF6 198 aa13.02□□□□□ -0.32
PDLIM2-216ENST00000464275 SACSQ9NZJ4 4579 aa13.01□□□□□ -0.33
PDLIM2-216ENST00000464275 MOBPQ13875 183 aa13.01□□□□□ -0.33
PDLIM2-216ENST00000464275 HRCT1Q6UXD1 115 aa13.01□□□□□ -0.33
PDLIM2-216ENST00000464275 ANAPC11Q9NYG5 84 aa13.01□□□□□ -0.33
PDLIM2-216ENST00000464275 A8MWP4 228 aa13□□□□□ -0.33
PDLIM2-216ENST00000464275 NDUFB1O75438 58 aa13□□□□□ -0.33
PDLIM2-216ENST00000464275 PRR15Q8IV56 129 aa13□□□□□ -0.33
PDLIM2-216ENST00000464275 LINC00472Q9H8W2 130 aa13□□□□□ -0.33
PDLIM2-216ENST00000464275 KRTAP29-1A8MX34 341 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-216ENST00000464275 FP248Q71RG6 208 aaPredicted RBP12.99□□□□□ -0.33
PDLIM2-216ENST00000464275 DEFB116Q30KQ4 102 aa12.98□□□□□ -0.33
PDLIM2-216ENST00000464275 MP68P56378 58 aa12.98□□□□□ -0.33
PDLIM2-216ENST00000464275 H3BPC8 53 aa12.97□□□□□ -0.33
PDLIM2-216ENST00000464275 WFDC13Q8IUB5 93 aa12.96□□□□□ -0.34
PDLIM2-216ENST00000464275 CASC2Q6XLA1 102 aa12.94□□□□□ -0.34
PDLIM2-216ENST00000464275 CYP4F30PQ9H0H9 118 aa12.91□□□□□ -0.34
PDLIM2-216ENST00000464275 hDV103S1A0JD37 113 aa12.88□□□□□ -0.35
PDLIM2-216ENST00000464275 SSBP3-AS1Q7Z2R9 100 aa12.87□□□□□ -0.35
PDLIM2-216ENST00000464275 TRAV22A0A0B4J277 110 aa12.85□□□□□ -0.35
PDLIM2-216ENST00000464275 A0A1B0GVY2 172 aa12.85□□□□□ -0.35
PDLIM2-216ENST00000464275 Q96NJ1 140 aa12.85□□□□□ -0.35
PDLIM2-216ENST00000464275 LRP1BQ9NZR2 4599 aa12.82□□□□□ -0.36
PDLIM2-216ENST00000464275 CD164Q04900 197 aa12.82□□□□□ -0.36
PDLIM2-216ENST00000464275 FAM229BQ4G0N7 80 aa12.82□□□□□ -0.36
PDLIM2-216ENST00000464275 H0Y9P7 68 aa12.81□□□□□ -0.36
PDLIM2-216ENST00000464275 SPANXA2-OT1Q8N9U9 137 aa12.81□□□□□ -0.36
PDLIM2-216ENST00000464275 MMP24-AS1A0A0U1RRL7 71 aa12.8□□□□□ -0.36
PDLIM2-216ENST00000464275 C1orf64Q8NEQ6 169 aa12.8□□□□□ -0.36
PDLIM2-216ENST00000464275 LINC00208Q96KT6 92 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms