RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 UNQ6190/PRO20217Q6UXQ8 127 aa4.97□□□□□ -1.61
USP4-207ENST00000462673 Q6ZSA8 131 aa4.97□□□□□ -1.61
USP4-207ENST00000462673 C7orf33Q8WU49 177 aa4.97□□□□□ -1.61
USP4-207ENST00000462673 PKD1P98161 4303 aa4.96□□□□□ -1.61
USP4-207ENST00000462673 FRAS1Q86XX4 4008 aa4.96□□□□□ -1.61
USP4-207ENST00000462673 FAT2Q9NYQ8 4349 aa4.96□□□□□ -1.62
USP4-207ENST00000462673 IGKV2-24A0A0C4DH68 120 aa4.96□□□□□ -1.62
USP4-207ENST00000462673 PRYO14603 147 aa4.96□□□□□ -1.62
USP4-207ENST00000462673 ELOF1P60002 83 aaKnown RBP4.96□□□□□ -1.62
USP4-207ENST00000462673 PLA2G1BP04054 148 aaKnown RBP4.95□□□□□ -1.62
USP4-207ENST00000462673 C9orf116Q5BN46 136 aaPredicted RBP4.95□□□□□ -1.62
USP4-207ENST00000462673 Q8NDZ9 215 aa4.95□□□□□ -1.62
USP4-207ENST00000462673 TMEM254Q8TBM7 123 aa4.95□□□□□ -1.62
USP4-207ENST00000462673 CIRBP-AS1Q8TBR5 109 aa4.95□□□□□ -1.62
USP4-207ENST00000462673 BPY2O14599 106 aa4.94□□□□□ -1.62
USP4-207ENST00000462673 ZNF73O43830 326 aaPredicted RBP4.94□□□□□ -1.62
USP4-207ENST00000462673 FP248Q71RG6 208 aaPredicted RBP4.94□□□□□ -1.62
USP4-207ENST00000462673 SCXQ7RTU7 201 aa4.94□□□□□ -1.62
USP4-207ENST00000462673 Q8N1X5 172 aa4.94□□□□□ -1.62
USP4-207ENST00000462673 SPACA4Q8TDM5 124 aa4.94□□□□□ -1.62
USP4-207ENST00000462673 FAM30AQ9NZY2 134 aa4.94□□□□□ -1.62
USP4-207ENST00000462673 C6orf48Q9UBA6 75 aa4.94□□□□□ -1.62
USP4-207ENST00000462673 A0A096LNI7 61 aa4.93□□□□□ -1.62
USP4-207ENST00000462673 IGKV4-1P06312 121 aa4.93□□□□□ -1.62
USP4-207ENST00000462673 C10orf25Q5T742 122 aa4.93□□□□□ -1.62
USP4-207ENST00000462673 PLAC8Q9NZF1 115 aa4.93□□□□□ -1.62
USP4-207ENST00000462673 A0A0U1RQV1 116 aa4.92□□□□□ -1.62
USP4-207ENST00000462673 Q6ZRP5 223 aa4.92□□□□□ -1.62
USP4-207ENST00000462673 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.92□□□□□ -1.62
USP4-207ENST00000462673 M0R378 163 aa4.91□□□□□ -1.62
USP4-207ENST00000462673 SMR3BP02814 79 aaPredicted RBP4.91□□□□□ -1.62
USP4-207ENST00000462673 HECTD4Q9Y4D8 3996 aa4.9□□□□□ -1.62
USP4-207ENST00000462673 EPPK1P58107 5090 aaKnown RBP4.9□□□□□ -1.62
USP4-207ENST00000462673 A0A1B0GW54 56 aa4.9□□□□□ -1.63
USP4-207ENST00000462673 CHTF8P0CG12 524 aa4.9□□□□□ -1.63
USP4-207ENST00000462673 VPREB1P12018 145 aa4.9□□□□□ -1.63
USP4-207ENST00000462673 OCR1Q9BZK8 76 aa4.9□□□□□ -1.63
USP4-207ENST00000462673 PLA2G2DQ9UNK4 145 aa4.9□□□□□ -1.63
USP4-207ENST00000462673 NKAPP1Q8N9T2 125 aa4.89□□□□□ -1.63
USP4-207ENST00000462673 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
USP4-207ENST00000462673 BIRC6Q9NR09 4857 aa4.88□□□□□ -1.63
USP4-207ENST00000462673 RPL37AP61513 92 aaKnown RBP4.88□□□□□ -1.63
USP4-207ENST00000462673 UBE2BP63146 152 aa4.88□□□□□ -1.63
USP4-207ENST00000462673 Q5VSD8 79 aa4.88□□□□□ -1.63
USP4-207ENST00000462673 A0A1W2PNN7 141 aa4.87□□□□□ -1.63
USP4-207ENST00000462673 PANO1I0J062 215 aa4.87□□□□□ -1.63
USP4-207ENST00000462673 C1orf195Q5TG92 126 aa4.87□□□□□ -1.63
USP4-207ENST00000462673 XAGE1AQ9HD64 81 aa4.87□□□□□ -1.63
USP4-207ENST00000462673 DNAH11Q96DT5 4516 aa4.87□□□□□ -1.63
USP4-207ENST00000462673 MRPL55Q7Z7F7 128 aaKnown RBP4.86□□□□□ -1.63
USP4-207ENST00000462673 PKHD1P08F94 4074 aa4.86□□□□□ -1.63
USP4-207ENST00000462673 IGLV5-37A0A075B6J1 123 aa4.84□□□□□ -1.63
USP4-207ENST00000462673 FAM229BQ4G0N7 80 aa4.84□□□□□ -1.63
USP4-207ENST00000462673 SMIM29Q86T20 159 aa4.84□□□□□ -1.63
USP4-207ENST00000462673 Q8N9L7 120 aa4.84□□□□□ -1.63
USP4-207ENST00000462673 DHRS4-AS1Q9P1J3 65 aa4.84□□□□□ -1.63
USP4-207ENST00000462673 IGLV5-48A0A075B6I7 105 aa4.83□□□□□ -1.64
USP4-207ENST00000462673 hDV103S1A0JD37 113 aa4.83□□□□□ -1.64
USP4-207ENST00000462673 FAM168BA1KXE4 195 aa4.83□□□□□ -1.64
USP4-207ENST00000462673 SPINK6Q6UWN8 80 aa4.83□□□□□ -1.64
USP4-207ENST00000462673 PHF5AQ7RTV0 110 aaKnown RBP4.83□□□□□ -1.64
USP4-207ENST00000462673 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
USP4-207ENST00000462673 V9GYY9 64 aa4.83□□□□□ -1.64
USP4-207ENST00000462673 C1orf137Q5JT78 98 aa4.82□□□□□ -1.64
USP4-207ENST00000462673 Q8NBF4 154 aa4.82□□□□□ -1.64
USP4-207ENST00000462673 HIGD2AQ9BW72 106 aa4.82□□□□□ -1.64
USP4-207ENST00000462673 LRP1BQ9NZR2 4599 aa4.82□□□□□ -1.64
USP4-207ENST00000462673 DYNC1H1Q14204 4646 aaKnown RBP4.81□□□□□ -1.64
USP4-207ENST00000462673 DNAH5Q8TE73 4624 aa4.81□□□□□ -1.64
USP4-207ENST00000462673 ETDCA0A1B0GVM5 59 aa4.81□□□□□ -1.64
USP4-207ENST00000462673 SERTAD4-AS1Q5TG53 156 aa4.81□□□□□ -1.64
USP4-207ENST00000462673 REG3GQ6UW15 175 aa4.81□□□□□ -1.64
USP4-207ENST00000462673 PRR15Q8IV56 129 aa4.81□□□□□ -1.64
USP4-207ENST00000462673 KCNQ1DNQ9H478 68 aa4.81□□□□□ -1.64
USP4-207ENST00000462673 PSORS1C2Q9UIG4 136 aa4.81□□□□□ -1.64
USP4-207ENST00000462673 IGLV1-50A0A075B6I6 118 aa4.8□□□□□ -1.64
USP4-207ENST00000462673 Q1T7F1 81 aa4.8□□□□□ -1.64
USP4-207ENST00000462673 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
USP4-207ENST00000462673 RPL37AP8A6NKH3 93 aa4.79□□□□□ -1.64
USP4-207ENST00000462673 NDUFB1O75438 58 aa4.79□□□□□ -1.64
USP4-207ENST00000462673 IGLV7-43P04211 117 aa4.79□□□□□ -1.64
USP4-207ENST00000462673 Q6ZRX8 168 aa4.79□□□□□ -1.64
USP4-207ENST00000462673 Q8N377 158 aa4.79□□□□□ -1.64
USP4-207ENST00000462673 ZCCHC13Q8WW36 166 aaKnown RBP4.79□□□□□ -1.64
USP4-207ENST00000462673 KRTAP4-6Q9BYQ5 205 aa4.79□□□□□ -1.64
USP4-207ENST00000462673 CYP4F30PQ9H0H9 118 aa4.79□□□□□ -1.64
USP4-207ENST00000462673 ZNF861PO60384 105 aa4.78□□□□□ -1.64
USP4-207ENST00000462673 UBE2AP49459 152 aa4.78□□□□□ -1.64
USP4-207ENST00000462673 KRTAP7-1Q8IUC3 87 aa4.78□□□□□ -1.64
USP4-207ENST00000462673 SPRR4Q96PI1 79 aa4.78□□□□□ -1.64
USP4-207ENST00000462673 KIAA1109Q2LD37 5005 aa4.78□□□□□ -1.65
USP4-207ENST00000462673 A0A1W2PNM2 257 aa4.77□□□□□ -1.65
USP4-207ENST00000462673 HCG22E2RYF7 251 aa4.77□□□□□ -1.65
USP4-207ENST00000462673 DEFB105AQ8NG35 78 aa4.77□□□□□ -1.65
USP4-207ENST00000462673 C1orf64Q8NEQ6 169 aa4.76□□□□□ -1.65
USP4-207ENST00000462673 H0Y9J4 135 aa4.75□□□□□ -1.65
USP4-207ENST00000462673 SPRR1AP35321 89 aa4.75□□□□□ -1.65
USP4-207ENST00000462673 MP68P56378 58 aa4.75□□□□□ -1.65
USP4-207ENST00000462673 DNAH8Q96JB1 4490 aa4.75□□□□□ -1.65
USP4-207ENST00000462673 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms