RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 H3BQ85 93 aa7.63□□□□□ -1.19
SYNE2-207ENST00000458046 C3orf84H3BNL1 204 aa7.62□□□□□ -1.19
SYNE2-207ENST00000458046 DEFB131BA0A096LNP1 70 aa7.61□□□□□ -1.19
SYNE2-207ENST00000458046 C8orf17Q9NRJ1 99 aa7.61□□□□□ -1.19
SYNE2-207ENST00000458046 HYDINQ4G0P3 5121 aa7.61□□□□□ -1.19
SYNE2-207ENST00000458046 SYCNQ0VAF6 134 aa7.6□□□□□ -1.19
SYNE2-207ENST00000458046 DEFB105AQ8NG35 78 aa7.6□□□□□ -1.19
SYNE2-207ENST00000458046 PRKDCP78527 4128 aaKnown RBP7.6□□□□□ -1.19
SYNE2-207ENST00000458046 PRR4Q16378 134 aa7.6□□□□□ -1.19
SYNE2-207ENST00000458046 LINC01556Q5JQF7 62 aa7.59□□□□□ -1.19
SYNE2-207ENST00000458046 CMYA5Q8N3K9 4069 aa7.58□□□□□ -1.2
SYNE2-207ENST00000458046 TRAV7A0A075B6U4 112 aa7.57□□□□□ -1.2
SYNE2-207ENST00000458046 Q8N9L7 120 aa7.56□□□□□ -1.2
SYNE2-207ENST00000458046 C7orf33Q8WU49 177 aa7.56□□□□□ -1.2
SYNE2-207ENST00000458046 RYR2Q92736 4967 aa7.56□□□□□ -1.2
SYNE2-207ENST00000458046 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
SYNE2-207ENST00000458046 DNAH1Q9P2D7 4330 aa7.55□□□□□ -1.2
SYNE2-207ENST00000458046 FAM168BA1KXE4 195 aa7.55□□□□□ -1.2
SYNE2-207ENST00000458046 ATP5EP56381 51 aaPredicted RBP7.55□□□□□ -1.2
SYNE2-207ENST00000458046 CASC10Q5T4H9 136 aa7.55□□□□□ -1.2
SYNE2-207ENST00000458046 LCE6AA0A183 80 aa7.54□□□□□ -1.2
SYNE2-207ENST00000458046 KCNQ1DNQ9H478 68 aa7.54□□□□□ -1.2
SYNE2-207ENST00000458046 LUZP6Q538Z0 58 aa7.53□□□□□ -1.2
SYNE2-207ENST00000458046 Q8N377 158 aa7.53□□□□□ -1.2
SYNE2-207ENST00000458046 RETNLBQ9BQ08 111 aa7.53□□□□□ -1.2
SYNE2-207ENST00000458046 PRB2P02812 416 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-207ENST00000458046 RMI2Q96E14 147 aa7.53□□□□□ -1.2
SYNE2-207ENST00000458046 H7BZZ5 65 aa7.52□□□□□ -1.21
SYNE2-207ENST00000458046 BCE1O60756 84 aa7.52□□□□□ -1.21
SYNE2-207ENST00000458046 NREPQ16612 68 aa7.52□□□□□ -1.21
SYNE2-207ENST00000458046 Q1T7F1 81 aa7.52□□□□□ -1.21
SYNE2-207ENST00000458046 DNAH10OSP0CZ25 163 aa7.52□□□□□ -1.21
SYNE2-207ENST00000458046 FAM229BQ4G0N7 80 aa7.51□□□□□ -1.21
SYNE2-207ENST00000458046 BPY2O14599 106 aa7.5□□□□□ -1.21
SYNE2-207ENST00000458046 ST20-AS1Q8NBB2 130 aa7.49□□□□□ -1.21
SYNE2-207ENST00000458046 Q9BRP9 147 aa7.49□□□□□ -1.21
SYNE2-207ENST00000458046 C16orf90A8MZG2 172 aa7.49□□□□□ -1.21
SYNE2-207ENST00000458046 A8MU10 97 aa7.48□□□□□ -1.21
SYNE2-207ENST00000458046 KLKP1Q107X0 134 aa7.48□□□□□ -1.21
SYNE2-207ENST00000458046 A6NED7 52 aa7.48□□□□□ -1.21
SYNE2-207ENST00000458046 IGLV1-50A0A075B6I6 118 aa7.47□□□□□ -1.21
SYNE2-207ENST00000458046 ETDCA0A1B0GVM5 59 aa7.47□□□□□ -1.21
SYNE2-207ENST00000458046 IGKV4-1P06312 121 aa7.47□□□□□ -1.21
SYNE2-207ENST00000458046 Q6ZRX8 168 aa7.47□□□□□ -1.21
SYNE2-207ENST00000458046 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
SYNE2-207ENST00000458046 F8WEM9 126 aa7.47□□□□□ -1.21
SYNE2-207ENST00000458046 TLX1NBP0CAT3 122 aa7.47□□□□□ -1.21
SYNE2-207ENST00000458046 DNAH3Q8TD57 4116 aa7.46□□□□□ -1.21
SYNE2-207ENST00000458046 IGLV5-48A0A075B6I7 105 aa7.46□□□□□ -1.22
SYNE2-207ENST00000458046 A8MWP4 228 aa7.45□□□□□ -1.22
SYNE2-207ENST00000458046 ERC2-IT1O76042 136 aa7.45□□□□□ -1.22
SYNE2-207ENST00000458046 A0A1W2PNM2 257 aa7.45□□□□□ -1.22
SYNE2-207ENST00000458046 NDUFC1O43677 76 aa7.45□□□□□ -1.22
SYNE2-207ENST00000458046 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
SYNE2-207ENST00000458046 IGLV8-61A0A075B6I0 122 aa7.44□□□□□ -1.22
SYNE2-207ENST00000458046 C1orf137Q5JT78 98 aa7.44□□□□□ -1.22
SYNE2-207ENST00000458046 DNAH10Q8IVF4 4471 aa7.44□□□□□ -1.22
SYNE2-207ENST00000458046 LYSTQ99698 3801 aa7.43□□□□□ -1.22
SYNE2-207ENST00000458046 A0A1B0GW54 56 aa7.43□□□□□ -1.22
SYNE2-207ENST00000458046 HUWE1Q7Z6Z7 4374 aaKnown RBP7.43□□□□□ -1.22
SYNE2-207ENST00000458046 SPRR1AP35321 89 aa7.42□□□□□ -1.22
SYNE2-207ENST00000458046 TMEM254Q8TBM7 123 aa7.42□□□□□ -1.22
SYNE2-207ENST00000458046 RYR1P21817 5038 aa7.41□□□□□ -1.22
SYNE2-207ENST00000458046 A0A0G2JQZ4 141 aa7.4□□□□□ -1.22
SYNE2-207ENST00000458046 A0A1W2PNN7 141 aa7.4□□□□□ -1.22
SYNE2-207ENST00000458046 C1orf134Q5TEV5 83 aa7.4□□□□□ -1.22
SYNE2-207ENST00000458046 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
SYNE2-207ENST00000458046 C1orf64Q8NEQ6 169 aa7.39□□□□□ -1.23
SYNE2-207ENST00000458046 CSMD3Q7Z407 3707 aa7.39□□□□□ -1.23
SYNE2-207ENST00000458046 Q8NBF4 154 aa7.38□□□□□ -1.23
SYNE2-207ENST00000458046 IGKV2-24A0A0C4DH68 120 aa7.38□□□□□ -1.23
SYNE2-207ENST00000458046 ROMO1P60602 79 aa7.37□□□□□ -1.23
SYNE2-207ENST00000458046 SMIM29Q86T20 159 aa7.37□□□□□ -1.23
SYNE2-207ENST00000458046 LCE2CQ5TA81 110 aa7.37□□□□□ -1.23
SYNE2-207ENST00000458046 CIRBP-AS1Q8TBR5 109 aa7.36□□□□□ -1.23
SYNE2-207ENST00000458046 HIGD2AQ9BW72 106 aa7.36□□□□□ -1.23
SYNE2-207ENST00000458046 HCG22E2RYF7 251 aa7.35□□□□□ -1.23
SYNE2-207ENST00000458046 K7EIL1 84 aa7.35□□□□□ -1.23
SYNE2-207ENST00000458046 SRRM2Q9UQ35 2752 aaKnown RBP7.35□□□□□ -1.23
SYNE2-207ENST00000458046 PRLHP81277 87 aa7.35□□□□□ -1.23
SYNE2-207ENST00000458046 DNAH9Q9NYC9 4486 aa7.35□□□□□ -1.23
SYNE2-207ENST00000458046 A0A096LNI7 61 aa7.34□□□□□ -1.23
SYNE2-207ENST00000458046 KRTAP1-5Q9BYS1 174 aa7.34□□□□□ -1.23
SYNE2-207ENST00000458046 DSCR10P59022 87 aa7.34□□□□□ -1.23
SYNE2-207ENST00000458046 SPRR4Q96PI1 79 aa7.34□□□□□ -1.23
SYNE2-207ENST00000458046 STAB2Q8WWQ8 2551 aa7.34□□□□□ -1.23
SYNE2-207ENST00000458046 DEFB116Q30KQ4 102 aa7.34□□□□□ -1.24
SYNE2-207ENST00000458046 K7EQZ3 153 aa7.33□□□□□ -1.24
SYNE2-207ENST00000458046 TENM2Q9NT68 2774 aa7.33□□□□□ -1.24
SYNE2-207ENST00000458046 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.33□□□□□ -1.24
SYNE2-207ENST00000458046 PSCAO43653 123 aa7.32□□□□□ -1.24
SYNE2-207ENST00000458046 COL7A1Q02388 2944 aa7.32□□□□□ -1.24
SYNE2-207ENST00000458046 IGFL1Q6UW32 110 aa7.31□□□□□ -1.24
SYNE2-207ENST00000458046 A0A087X002 238 aa7.3□□□□□ -1.24
SYNE2-207ENST00000458046 A0A1B0GVX0 72 aa7.3□□□□□ -1.24
SYNE2-207ENST00000458046 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.3□□□□□ -1.24
SYNE2-207ENST00000458046 ASB16-AS1Q495Z4 193 aa7.3□□□□□ -1.24
SYNE2-207ENST00000458046 TRAV22A0A0B4J277 110 aa7.28□□□□□ -1.24
SYNE2-207ENST00000458046 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
SYNE2-207ENST00000458046 SACSQ9NZJ4 4579 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms