RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.48□□□□□ -1.69
CUBNP3-201ENST00000457461 PRO0255Q9UI72 69 aa4.48□□□□□ -1.69
CUBNP3-201ENST00000457461 COX7B2Q8TF08 81 aa4.48□□□□□ -1.69
CUBNP3-201ENST00000457461 PRKDCP78527 4128 aaKnown RBP4.47□□□□□ -1.69
CUBNP3-201ENST00000457461 NANOS2P60321 138 aaKnown RBP4.47□□□□□ -1.69
CUBNP3-201ENST00000457461 CHCHD10Q8WYQ3 142 aaPredicted RBP4.47□□□□□ -1.69
CUBNP3-201ENST00000457461 PRB2P02812 416 aaPredicted RBP4.46□□□□□ -1.7
CUBNP3-201ENST00000457461 DEFB104AQ8WTQ1 72 aa4.46□□□□□ -1.7
CUBNP3-201ENST00000457461 COX6A2Q02221 97 aa4.45□□□□□ -1.7
CUBNP3-201ENST00000457461 DYNC2H1Q8NCM8 4307 aaKnown RBP4.45□□□□□ -1.7
CUBNP3-201ENST00000457461 H3BNG1 76 aa4.45□□□□□ -1.7
CUBNP3-201ENST00000457461 LINC00158P58513 81 aa4.45□□□□□ -1.7
CUBNP3-201ENST00000457461 COX17Q14061 63 aa4.45□□□□□ -1.7
CUBNP3-201ENST00000457461 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
CUBNP3-201ENST00000457461 COL7A1Q02388 2944 aa4.44□□□□□ -1.7
CUBNP3-201ENST00000457461 A0A0J9YWU9 116 aa4.44□□□□□ -1.7
CUBNP3-201ENST00000457461 M0R2N4 97 aa4.44□□□□□ -1.7
CUBNP3-201ENST00000457461 STAB2Q8WWQ8 2551 aa4.44□□□□□ -1.7
CUBNP3-201ENST00000457461 IGLV7-46A0A075B6I9 117 aa4.43□□□□□ -1.7
CUBNP3-201ENST00000457461 ROMO1P60602 79 aa4.43□□□□□ -1.7
CUBNP3-201ENST00000457461 A0A1W2PNM2 257 aa4.42□□□□□ -1.7
CUBNP3-201ENST00000457461 SMIM29Q86T20 159 aa4.42□□□□□ -1.7
CUBNP3-201ENST00000457461 A0A096LPF7 62 aa4.42□□□□□ -1.7
CUBNP3-201ENST00000457461 SPAG11BQ08648 103 aa4.42□□□□□ -1.7
CUBNP3-201ENST00000457461 HIGD2BQ4VC39 106 aa4.42□□□□□ -1.7
CUBNP3-201ENST00000457461 C9orf163Q8N9P6 203 aa4.42□□□□□ -1.7
CUBNP3-201ENST00000457461 A0A1B0GUV1 79 aa4.41□□□□□ -1.7
CUBNP3-201ENST00000457461 COA5Q86WW8 74 aa4.41□□□□□ -1.7
CUBNP3-201ENST00000457461 DNAH7Q8WXX0 4024 aa4.41□□□□□ -1.7
CUBNP3-201ENST00000457461 C1orf134Q5TEV5 83 aa4.4□□□□□ -1.7
CUBNP3-201ENST00000457461 H0Y9P7 68 aa4.4□□□□□ -1.71
CUBNP3-201ENST00000457461 HTN3P15516 51 aa4.4□□□□□ -1.71
CUBNP3-201ENST00000457461 LELP1Q5T871 98 aa4.4□□□□□ -1.71
CUBNP3-201ENST00000457461 DEFB131BA0A096LNP1 70 aa4.39□□□□□ -1.71
CUBNP3-201ENST00000457461 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
CUBNP3-201ENST00000457461 SPATA8Q6RVD6 105 aa4.39□□□□□ -1.71
CUBNP3-201ENST00000457461 DNAH1Q9P2D7 4330 aa4.38□□□□□ -1.71
CUBNP3-201ENST00000457461 SPINK7P58062 85 aa4.38□□□□□ -1.71
CUBNP3-201ENST00000457461 SPAG11AQ6PDA7 123 aa4.38□□□□□ -1.71
CUBNP3-201ENST00000457461 MEGF8Q7Z7M0 2845 aa4.38□□□□□ -1.71
CUBNP3-201ENST00000457461 CDK2AP2O75956 126 aa4.36□□□□□ -1.71
CUBNP3-201ENST00000457461 IGLV6-57P01721 117 aa4.36□□□□□ -1.71
CUBNP3-201ENST00000457461 SEC61BP60468 96 aaKnown RBP4.36□□□□□ -1.71
CUBNP3-201ENST00000457461 Q6ZQY7 126 aa4.36□□□□□ -1.71
CUBNP3-201ENST00000457461 Q8IZM0 81 aa4.36□□□□□ -1.71
CUBNP3-201ENST00000457461 CSMD3Q7Z407 3707 aa4.35□□□□□ -1.71
CUBNP3-201ENST00000457461 A0A087WSZ3 146 aa4.35□□□□□ -1.71
CUBNP3-201ENST00000457461 LINC00959A0A1B0GUT2 108 aa4.35□□□□□ -1.71
CUBNP3-201ENST00000457461 ST20-AS1Q8NBB2 130 aa4.35□□□□□ -1.71
CUBNP3-201ENST00000457461 PRR34Q9NV39 138 aa4.35□□□□□ -1.71
CUBNP3-201ENST00000457461 PLECQ15149 4684 aaKnown RBP4.35□□□□□ -1.71
CUBNP3-201ENST00000457461 IGLV5-48A0A075B6I7 105 aa4.35□□□□□ -1.71
CUBNP3-201ENST00000457461 ADM2Q7Z4H4 148 aa4.35□□□□□ -1.71
CUBNP3-201ENST00000457461 Q8N9L7 120 aa4.35□□□□□ -1.71
CUBNP3-201ENST00000457461 VPS13DQ5THJ4 4388 aa4.34□□□□□ -1.71
CUBNP3-201ENST00000457461 LINC01556Q5JQF7 62 aa4.34□□□□□ -1.71
CUBNP3-201ENST00000457461 CSAG1Q6PB30 78 aa4.34□□□□□ -1.71
CUBNP3-201ENST00000457461 Q6ZR54 194 aa4.34□□□□□ -1.71
CUBNP3-201ENST00000457461 Q8NDZ9 215 aa4.34□□□□□ -1.71
CUBNP3-201ENST00000457461 KRTAP16-1A8MUX0 517 aa4.33□□□□□ -1.72
CUBNP3-201ENST00000457461 REG3AQ06141 175 aa4.33□□□□□ -1.72
CUBNP3-201ENST00000457461 PRR4Q16378 134 aa4.33□□□□□ -1.72
CUBNP3-201ENST00000457461 WFDC10BQ8IUB3 73 aa4.33□□□□□ -1.72
CUBNP3-201ENST00000457461 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.33□□□□□ -1.72
CUBNP3-201ENST00000457461 STARD9Q9P2P6 4700 aa4.33□□□□□ -1.72
CUBNP3-201ENST00000457461 FBN3Q75N90 2809 aa4.33□□□□□ -1.72
CUBNP3-201ENST00000457461 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
CUBNP3-201ENST00000457461 ANGP03950 147 aaKnown RBP4.32□□□□□ -1.72
CUBNP3-201ENST00000457461 DNAH10OSP0CZ25 163 aa4.32□□□□□ -1.72
CUBNP3-201ENST00000457461 SPRR4Q96PI1 79 aa4.32□□□□□ -1.72
CUBNP3-201ENST00000457461 REG3GQ6UW15 175 aa4.32□□□□□ -1.72
CUBNP3-201ENST00000457461 LYSTQ99698 3801 aa4.32□□□□□ -1.72
CUBNP3-201ENST00000457461 IGKV3OR2-268A0A0C4DH90 116 aa4.31□□□□□ -1.72
CUBNP3-201ENST00000457461 DSCR10P59022 87 aa4.31□□□□□ -1.72
CUBNP3-201ENST00000457461 MIR22HGQ0VDD5 57 aa4.31□□□□□ -1.72
CUBNP3-201ENST00000457461 KRTAP26-1Q6PEX3 210 aa4.31□□□□□ -1.72
CUBNP3-201ENST00000457461 CLPSL2Q6UWE3 100 aa4.31□□□□□ -1.72
CUBNP3-201ENST00000457461 APLNQ9ULZ1 77 aa4.31□□□□□ -1.72
CUBNP3-201ENST00000457461 KLK12Q9UKR0 248 aa4.3□□□□□ -1.72
CUBNP3-201ENST00000457461 DNAH6Q9C0G6 4158 aa4.3□□□□□ -1.72
CUBNP3-201ENST00000457461 NUPR2A6NF83 97 aa4.3□□□□□ -1.72
CUBNP3-201ENST00000457461 KRTAP29-1A8MX34 341 aaPredicted RBP4.29□□□□□ -1.72
CUBNP3-201ENST00000457461 IGLV10-54A0A075B6I4 117 aa4.28□□□□□ -1.72
CUBNP3-201ENST00000457461 TOMM7Q9P0U1 55 aa4.28□□□□□ -1.72
CUBNP3-201ENST00000457461 UQCR11O14957 56 aa4.27□□□□□ -1.73
CUBNP3-201ENST00000457461 KRTAP25-1Q3LHN0 102 aa4.27□□□□□ -1.73
CUBNP3-201ENST00000457461 C1orf137Q5JT78 98 aa4.27□□□□□ -1.73
CUBNP3-201ENST00000457461 TENM2Q9NT68 2774 aa4.27□□□□□ -1.73
CUBNP3-201ENST00000457461 IGLV5-37A0A075B6J1 123 aa4.27□□□□□ -1.73
CUBNP3-201ENST00000457461 Q8NBF4 154 aa4.27□□□□□ -1.73
CUBNP3-201ENST00000457461 DNAH10Q8IVF4 4471 aa4.26□□□□□ -1.73
CUBNP3-201ENST00000457461 IGLV1-50A0A075B6I6 118 aa4.26□□□□□ -1.73
CUBNP3-201ENST00000457461 ALMS1Q8TCU4 4167 aa4.25□□□□□ -1.73
CUBNP3-201ENST00000457461 TGP01266 2768 aa4.25□□□□□ -1.73
CUBNP3-201ENST00000457461 C15orf56Q8N910 161 aa4.25□□□□□ -1.73
CUBNP3-201ENST00000457461 GVQW2A0A096LPI5 108 aaPredicted RBP4.24□□□□□ -1.73
CUBNP3-201ENST00000457461 K7EQZ3 153 aa4.24□□□□□ -1.73
CUBNP3-201ENST00000457461 ZNF861PO60384 105 aa4.24□□□□□ -1.73
CUBNP3-201ENST00000457461 KRTAP1-5Q9BYS1 174 aa4.24□□□□□ -1.73
CUBNP3-201ENST00000457461 TP53AIP1Q9HCN2 124 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms