RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.57□□□□□ -0.56
SEMA3B-209ENST00000456560 LINC00336Q6ZUF6 198 aa11.57□□□□□ -0.56
SEMA3B-209ENST00000456560 SPRR4Q96PI1 79 aa11.56□□□□□ -0.56
SEMA3B-209ENST00000456560 TGP01266 2768 aa11.55□□□□□ -0.56
SEMA3B-209ENST00000456560 LYSTQ99698 3801 aa11.55□□□□□ -0.56
SEMA3B-209ENST00000456560 LRCOL1A6NCL2 159 aa11.54□□□□□ -0.56
SEMA3B-209ENST00000456560 HIGD2AQ9BW72 106 aa11.54□□□□□ -0.56
SEMA3B-209ENST00000456560 CSMD3Q7Z407 3707 aa11.54□□□□□ -0.56
SEMA3B-209ENST00000456560 PRLHP81277 87 aa11.54□□□□□ -0.56
SEMA3B-209ENST00000456560 NBDYA0A0U1RRE5 68 aa11.52□□□□□ -0.56
SEMA3B-209ENST00000456560 CHTF8P0CG12 524 aa11.52□□□□□ -0.56
SEMA3B-209ENST00000456560 FAM30AQ9NZY2 134 aa11.52□□□□□ -0.57
SEMA3B-209ENST00000456560 PRO0628Q9UI54 55 aa11.52□□□□□ -0.57
SEMA3B-209ENST00000456560 KRTAP11-1Q8IUC1 163 aa11.51□□□□□ -0.57
SEMA3B-209ENST00000456560 C9orf163Q8N9P6 203 aa11.51□□□□□ -0.57
SEMA3B-209ENST00000456560 LINC00476Q8WZB0 136 aa11.51□□□□□ -0.57
SEMA3B-209ENST00000456560 PHF5AQ7RTV0 110 aaKnown RBP11.5□□□□□ -0.57
SEMA3B-209ENST00000456560 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
SEMA3B-209ENST00000456560 FAM229BQ4G0N7 80 aa11.49□□□□□ -0.57
SEMA3B-209ENST00000456560 Q6ZRN7 208 aaPredicted RBP11.49□□□□□ -0.57
SEMA3B-209ENST00000456560 IGLV8-61A0A075B6I0 122 aa11.47□□□□□ -0.57
SEMA3B-209ENST00000456560 PLECQ15149 4684 aaKnown RBP11.47□□□□□ -0.57
SEMA3B-209ENST00000456560 TENM2Q9NT68 2774 aa11.47□□□□□ -0.57
SEMA3B-209ENST00000456560 DNAH7Q8WXX0 4024 aa11.46□□□□□ -0.57
SEMA3B-209ENST00000456560 IGFL1Q6UW32 110 aa11.46□□□□□ -0.57
SEMA3B-209ENST00000456560 STARD9Q9P2P6 4700 aa11.46□□□□□ -0.58
SEMA3B-209ENST00000456560 H0Y9J4 135 aa11.45□□□□□ -0.58
SEMA3B-209ENST00000456560 PKIGQ9Y2B9 76 aa11.45□□□□□ -0.58
SEMA3B-209ENST00000456560 MPLKIPQ8TAP9 179 aa11.44□□□□□ -0.58
SEMA3B-209ENST00000456560 A0A0G2JQZ4 141 aa11.44□□□□□ -0.58
SEMA3B-209ENST00000456560 DSCR10P59022 87 aa11.43□□□□□ -0.58
SEMA3B-209ENST00000456560 SPRR1BP22528 89 aa11.41□□□□□ -0.58
SEMA3B-209ENST00000456560 LCE6AA0A183 80 aa11.4□□□□□ -0.58
SEMA3B-209ENST00000456560 PANO1I0J062 215 aa11.4□□□□□ -0.58
SEMA3B-209ENST00000456560 K7EQZ3 153 aa11.39□□□□□ -0.59
SEMA3B-209ENST00000456560 UBE2AP49459 152 aa11.39□□□□□ -0.59
SEMA3B-209ENST00000456560 BRK1Q8WUW1 75 aa11.37□□□□□ -0.59
SEMA3B-209ENST00000456560 KRTAP13-1Q8IUC0 172 aa11.34□□□□□ -0.59
SEMA3B-209ENST00000456560 VPS13DQ5THJ4 4388 aa11.33□□□□□ -0.6
SEMA3B-209ENST00000456560 A0A087WSZ3 146 aa11.32□□□□□ -0.6
SEMA3B-209ENST00000456560 hDV103S1A0JD37 113 aa11.32□□□□□ -0.6
SEMA3B-209ENST00000456560 HCG22E2RYF7 251 aa11.32□□□□□ -0.6
SEMA3B-209ENST00000456560 ZCCHC13Q8WW36 166 aaKnown RBP11.32□□□□□ -0.6
SEMA3B-209ENST00000456560 SPACA4Q8TDM5 124 aa11.32□□□□□ -0.6
SEMA3B-209ENST00000456560 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.31□□□□□ -0.6
SEMA3B-209ENST00000456560 A0A087WTM6 91 aa11.31□□□□□ -0.6
SEMA3B-209ENST00000456560 DEFB116Q30KQ4 102 aa11.28□□□□□ -0.6
SEMA3B-209ENST00000456560 C1orf64Q8NEQ6 169 aa11.28□□□□□ -0.6
SEMA3B-209ENST00000456560 Q6ZR54 194 aa11.25□□□□□ -0.61
SEMA3B-209ENST00000456560 WWC2-AS2Q96NR7 200 aa11.25□□□□□ -0.61
SEMA3B-209ENST00000456560 WFDC13Q8IUB5 93 aa11.24□□□□□ -0.61
SEMA3B-209ENST00000456560 PRR4Q16378 134 aa11.21□□□□□ -0.61
SEMA3B-209ENST00000456560 RTL8CO15255 209 aa11.21□□□□□ -0.62
SEMA3B-209ENST00000456560 SRRM2Q9UQ35 2752 aaKnown RBP11.21□□□□□ -0.62
SEMA3B-209ENST00000456560 LINC00472Q9H8W2 130 aa11.2□□□□□ -0.62
SEMA3B-209ENST00000456560 RPL37AP61513 92 aaKnown RBP11.2□□□□□ -0.62
SEMA3B-209ENST00000456560 Q1T7F1 81 aa11.19□□□□□ -0.62
SEMA3B-209ENST00000456560 CYP4F30PQ9H0H9 118 aa11.19□□□□□ -0.62
SEMA3B-209ENST00000456560 MP68P56378 58 aa11.18□□□□□ -0.62
SEMA3B-209ENST00000456560 NDUFB1O75438 58 aa11.17□□□□□ -0.62
SEMA3B-209ENST00000456560 KMT2AQ03164 3969 aa11.17□□□□□ -0.62
SEMA3B-209ENST00000456560 LINC00483Q53H64 154 aa11.16□□□□□ -0.62
SEMA3B-209ENST00000456560 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
SEMA3B-209ENST00000456560 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
SEMA3B-209ENST00000456560 HECTD4Q9Y4D8 3996 aa11.15□□□□□ -0.62
SEMA3B-209ENST00000456560 PRR15Q8IV56 129 aa11.15□□□□□ -0.63
SEMA3B-209ENST00000456560 DNAH17Q9UFH2 4485 aa11.14□□□□□ -0.63
SEMA3B-209ENST00000456560 PSORS1C2Q9UIG4 136 aa11.13□□□□□ -0.63
SEMA3B-209ENST00000456560 IGLV5-52A0A0A0MRZ9 124 aa11.13□□□□□ -0.63
SEMA3B-209ENST00000456560 TRAV22A0A0B4J277 110 aa11.13□□□□□ -0.63
SEMA3B-209ENST00000456560 A8MWP4 228 aa11.13□□□□□ -0.63
SEMA3B-209ENST00000456560 C1orf195Q5TG92 126 aa11.13□□□□□ -0.63
SEMA3B-209ENST00000456560 LINC00208Q96KT6 92 aa11.13□□□□□ -0.63
SEMA3B-209ENST00000456560 LY6G6CO95867 125 aa11.12□□□□□ -0.63
SEMA3B-209ENST00000456560 IGLV9-49A0A0B4J1Y8 123 aa11.11□□□□□ -0.63
SEMA3B-209ENST00000456560 PSPHP1O15172 72 aa11.1□□□□□ -0.63
SEMA3B-209ENST00000456560 CASC2Q6XLA1 102 aa11.1□□□□□ -0.63
SEMA3B-209ENST00000456560 C1orf134Q5TEV5 83 aa11.09□□□□□ -0.63
SEMA3B-209ENST00000456560 ZNF706Q9Y5V0 76 aaPredicted RBP11.09□□□□□ -0.63
SEMA3B-209ENST00000456560 DNAH2Q9P225 4427 aa11.09□□□□□ -0.63
SEMA3B-209ENST00000456560 H0Y9P7 68 aa11.08□□□□□ -0.64
SEMA3B-209ENST00000456560 ZNF861PO60384 105 aa11.07□□□□□ -0.64
SEMA3B-209ENST00000456560 Q96NJ1 140 aa11.05□□□□□ -0.64
SEMA3B-209ENST00000456560 HYDINQ4G0P3 5121 aa11.05□□□□□ -0.64
SEMA3B-209ENST00000456560 H3BPC8 53 aa11.03□□□□□ -0.64
SEMA3B-209ENST00000456560 MOBPQ13875 183 aa11.01□□□□□ -0.65
SEMA3B-209ENST00000456560 SPANXA2-OT1Q8N9U9 137 aa11.01□□□□□ -0.65
SEMA3B-209ENST00000456560 V9GYY9 64 aa11.01□□□□□ -0.65
SEMA3B-209ENST00000456560 ALMS1Q8TCU4 4167 aa11.01□□□□□ -0.65
SEMA3B-209ENST00000456560 MMP24-AS1A0A0U1RRL7 71 aa11.01□□□□□ -0.65
SEMA3B-209ENST00000456560 DNAH8Q96JB1 4490 aa10.99□□□□□ -0.65
SEMA3B-209ENST00000456560 A8MUN3 132 aa10.99□□□□□ -0.65
SEMA3B-209ENST00000456560 ANAPC11Q9NYG5 84 aa10.99□□□□□ -0.65
SEMA3B-209ENST00000456560 SACSQ9NZJ4 4579 aa10.97□□□□□ -0.65
SEMA3B-209ENST00000456560 IGLV7-43P04211 117 aa10.96□□□□□ -0.66
SEMA3B-209ENST00000456560 DNAH6Q9C0G6 4158 aa10.95□□□□□ -0.66
SEMA3B-209ENST00000456560 ASB16-AS1Q495Z4 193 aa10.95□□□□□ -0.66
SEMA3B-209ENST00000456560 Q5VV11 94 aa10.9□□□□□ -0.66
SEMA3B-209ENST00000456560 KRTAP10-2P60368 255 aa10.9□□□□□ -0.66
SEMA3B-209ENST00000456560 Q8N9P0 234 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms